Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0072011 Lupinus albus HOM05D005339 ORTHO05D006561 2.1e-170 602.4 337 100.0
arahy.Tifrunner.gnm1.ann1.RMHT0B Arachis hypogaea HOM05D005339 ORTHO05D006561 5.3e-158 561.2 338 94.4
Glyma.05G234700 Glycine max HOM05D005339 ORTHO05D006561 9.0e-158 560.5 337 92.3
Ciclev10028803m.g Citrus clementina HOM05D005339 ORTHO05D006561 3.4e-157 558.5 337 87.5
Glyma.08G042200 Glycine max HOM05D005339 ORTHO05D006561 2.2e-156 555.8 339 92.3
Actinidia20485 Actinidia chinensis HOM05D005339 ORTHO05D006561 6.5e-156 554.3 337 90.8
THA.LOC104807785 Tarenaya hassleriana HOM05D005339 ORTHO05D006561 3.2e-155 552.0 337 90.2
arahy.Tifrunner.gnm1.ann1.UV505Z Arachis hypogaea HOM05D005339 ORTHO05D006561 7.2e-155 550.8 354 90.1
Manes.04G078200 Manihot esculenta HOM05D005339 ORTHO05D006561 2.1e-154 549.3 337 91.1
Thecc.02G066900 Theobroma cacao HOM05D005339 ORTHO05D006561 2.1e-154 549.3 338 90.8
Psat7g008680 Pisum sativum HOM05D005339 ORTHO05D006561 4.6e-154 548.1 341 91.5
Prupe.7G010600 Prunus persica HOM05D005339 ORTHO05D006561 7.9e-154 547.4 337 89.6
Gohir.D02G224500 Gossypium hirsutum HOM05D005339 ORTHO05D006561 1.4e-153 546.6 337 89.3
Potri.004G168400 Populus trichocarpa HOM05D005339 ORTHO05D006561 1.8e-153 546.2 337 89.6
CsaV3_2G015710 Cucumis sativus L. HOM05D005339 ORTHO05D006561 2.3e-153 545.8 337 90.2
Gohir.A03G203200 Gossypium hirsutum HOM05D005339 ORTHO05D006561 2.3e-153 545.8 337 89.3
Gorai.005G252300 Gossypium raimondii HOM05D005339 ORTHO05D006561 2.3e-153 545.8 337 89.3
Lalb_Chr23g0275171 Lupinus albus HOM05D005339 ORTHO05D006561 3.0e-153 545.4 321 96.3
Eucgr.I01375 Eucalyptus grandis HOM05D005339 ORTHO05D006561 3.9e-153 545.0 338 89.6
Rhsim11G0187800 Rhododendron simsii HOM05D005339 ORTHO05D006561 5.1e-153 544.7 337 89.0
ClCG02G011380 Citrullus lanatus HOM05D005339 ORTHO05D006561 2.0e-152 542.7 337 89.9
RcHm_v2.0_Chr2g0122771 Rosa chinensis HOM05D005339 ORTHO05D006561 3.3e-152 542.0 337 88.7
CSS0049457 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 4.3e-152 541.6 338 88.8
Hma1.2p1_0032F.1_g019680 Hydrangea macrophylla HOM05D005339 ORTHO05D006561 4.3e-152 541.6 337 88.7
Medtr8g105120 Medicago truncatula HOM05D005339 ORTHO05D006561 4.3e-152 541.6 340 90.3
Sabra04G0112800 Salix brachista HOM05D005339 ORTHO05D006561 5.7e-152 541.2 337 88.1
PGR142G1539 Punica granatum HOM05D005339 ORTHO05D006561 7.4e-152 540.8 337 88.7
Potri.009G129700 Populus trichocarpa HOM05D005339 ORTHO05D006561 1.3e-151 540.0 337 88.7
GSVIVG01024083001 Vitis vinifera HOM05D005339 ORTHO05D006561 1.3e-151 540.0 337 89.6
Phvul.002G320300 Phaseolus vulgaris HOM05D005339 ORTHO05D006561 1.7e-151 539.7 340 90.3
CANSAT25G3263 Cannabis sativa HOM05D005339 ORTHO05D006561 6.3e-151 537.7 337 89.3
Cfa005184 Carpinus fangiana HOM05D005339 ORTHO05D006561 8.2e-151 537.3 337 87.5
QL11p047539 Quercus lobata HOM05D005339 ORTHO05D006561 1.1e-150 537.0 336 88.4
QL11p047573 Quercus lobata HOM05D005339 ORTHO05D006561 1.1e-150 537.0 336 88.4
vmacro02249 Vaccinium macrocarpon HOM05D005339 ORTHO05D006561 1.8e-150 536.2 337 89.3
PGSC0003DMG400001633 Solanum tuberosum HOM05D005339 ORTHO05D006561 5.3e-150 534.6 337 87.8
VMungo0251G0038 Vigna mungo HOM05D005339 ORTHO05D006561 5.3e-150 534.6 340 90.0
Atru.chr5.3227 Acer truncatum HOM05D005339 ORTHO05D006561 9.1e-150 533.9 337 90.2
ATR0810G182 Amborella trichopoda HOM05D005339 ORTHO05D006561 9.1e-150 533.9 337 87.5
CiPaw.05G077200 Carya illinoinensis HOM05D005339 ORTHO05D006561 1.2e-149 533.5 337 87.2
Duzib132G0613 Durio zibethinus HOM05D005339 ORTHO05D006561 1.5e-149 533.1 349 86.2
Sed0019675 Sechium edule HOM05D005339 ORTHO05D006561 1.0e-148 530.4 337 87.5
Hund06405 Selenicereus undatus HOM05D005339 ORTHO05D006561 2.2e-148 529.3 337 86.4
TWI31G0803 Tripterygium wilfordii HOM05D005339 ORTHO05D006561 2.2e-148 529.3 337 89.3
CAN.G588.26 Capsicum annuum HOM05D005339 ORTHO05D006561 3.8e-148 528.5 337 87.5
Aqoxy5G01796 Aquilegia oxysepala HOM05D005339 ORTHO05D006561 1.1e-147 526.9 337 87.2
MD14G1006100 Malus domestica HOM05D005339 ORTHO05D006561 1.9e-147 526.2 337 86.4
CiPaw.06G125300 Carya illinoinensis HOM05D005339 ORTHO05D006561 3.2e-147 525.4 337 86.6
Cc11_g02780 Coffea canephora HOM05D005339 ORTHO05D006561 3.2e-147 525.4 338 87.6
Thhalv10000232m.g Eutrema salsugineum HOM05D005339 ORTHO05D006561 3.2e-147 525.4 338 86.1
CDE04G0258 Ceratophyllum demersum HOM05D005339 ORTHO05D006561 9.4e-147 523.9 337 86.6
Solyc01g111140.3 Solanum lycopersicum HOM05D005339 ORTHO05D006561 1.2e-146 523.5 337 87.5
Sopen01g053200 Solanum pennellii HOM05D005339 ORTHO05D006561 1.2e-146 523.5 337 87.5
AT2G21150 Arabidopsis thaliana HOM05D005339 ORTHO05D006561 2.1e-146 522.7 338 84.0
AL4G10240 Arabidopsis lyrata HOM05D005339 ORTHO05D006561 2.7e-146 522.3 338 83.7
Nitab4.5_0000283g0140 Nicotiana tabacum HOM05D005339 ORTHO05D006561 2.7e-146 522.3 337 87.2
Nitab4.5_0000980g0240 Nicotiana tabacum HOM05D005339 ORTHO05D006561 2.7e-146 522.3 337 87.2
Peaxi162Scf00362g01036 Petunia axillaris HOM05D005339 ORTHO05D006561 3.6e-146 521.9 337 86.6
Sp4g00300 Schrenkiella parvula HOM05D005339 ORTHO05D006561 4.7e-146 521.5 338 85.5
Carub.0004s0017 Capsella rubella HOM05D005339 ORTHO05D006561 6.1e-146 521.2 338 83.7
MD12G1008800 Malus domestica HOM05D005339 ORTHO05D006561 7.9e-146 520.8 337 85.5
Lj4g0026543 Lotus japonicus HOM05D005339 ORTHO05D006561 1.0e-145 520.4 321 91.6
CDE02G2588 Ceratophyllum demersum HOM05D005339 ORTHO05D006561 1.8e-145 519.6 337 80.4
DCAR_022955 Daucus carota HOM05D005339 ORTHO05D006561 8.8e-145 517.3 355 82.8
DCAR_022956 Daucus carota HOM05D005339 ORTHO05D006561 8.8e-145 517.3 355 82.8
HanXRQChr15g0478851 Helianthus annuus HOM05D005339 ORTHO05D006561 1.5e-144 516.5 337 86.9
BcaB08g34965 Brassica carinata HOM05D005339 ORTHO05D006561 2.6e-144 515.8 338 84.6
LjContig00310g0009118 Lotus japonicus HOM05D005339 ORTHO05D006561 4.4e-144 515.0 338 87.3
Migut.B00167 Erythranthe guttata HOM05D005339 ORTHO05D006561 5.7e-144 514.6 339 86.1
SGA_v2.0_scaffold58G20457 Striga asiatica HOM05D005339 ORTHO05D006561 7.4e-144 514.2 359 83.3
Os09g0535300 Oryza sativa ssp. japonica HOM05D005339 ORTHO05D006561 8.2e-143 510.8 339 85.0
Zm00001eb103630 Zea mays HOM05D005339 ORTHO05D006561 1.1e-142 510.4 337 84.9
Sabra09G0099200 Salix brachista HOM05D005339 ORTHO05D006561 3.1e-142 508.8 372 79.0
FvH4_1g25110 Fragaria vesca HOM05D005339 ORTHO05D006561 4.1e-142 508.4 337 84.9
Dinv41975 Davidia involucrata HOM05D005339 ORTHO05D006561 1.2e-141 506.9 337 86.1
C04p50370 Brassica napus HOM05D005339 ORTHO05D006561 1.5e-141 506.5 338 83.7
BolC4t26635H Brassica oleracea HOM05D005339 ORTHO05D006561 1.5e-141 506.5 338 83.7
A09p58500 Brassica napus HOM05D005339 ORTHO05D006561 2.6e-141 505.8 345 83.5
ECA246G3996 Erigeron canadensis HOM05D005339 ORTHO05D006561 2.6e-141 505.8 330 87.3
PSO700G0269 Papaver somniferum HOM05D005339 ORTHO05D006561 3.5e-141 505.4 339 84.4
unitig_744.g24266 Utricularia gibba HOM05D005339 ORTHO05D006561 4.5e-141 505.0 352 83.0
MBI19_g09243_MAGBIO Magnolia biondii HOM05D005339 ORTHO05D006561 7.7e-141 504.2 365 79.2
Oeu055639.3 Olea europaea HOM05D005339 ORTHO05D006561 1.0e-140 503.8 337 85.2
C08p41800 Brassica napus HOM05D005339 ORTHO05D006561 2.2e-140 502.7 347 82.4
Aa31LG7G15530 Aethionema arabicum HOM05D005339 ORTHO05D006561 2.9e-140 502.3 330 85.8
Nn7g36850 Nelumbo nucifera HOM05D005339 ORTHO05D006561 3.8e-140 501.9 321 86.3
PSO170G1371 Papaver somniferum HOM05D005339 ORTHO05D006561 3.8e-140 501.9 339 84.4
Ca_17265_v3 Cicer arietinum L. HOM05D005339 ORTHO05D006561 6.5e-140 501.1 325 88.9
Ca_17286_v3 Cicer arietinum L. HOM05D005339 ORTHO05D006561 6.5e-140 501.1 325 88.9
AUR62010093 Chenopodium quinoa HOM05D005339 ORTHO05D006561 1.9e-139 499.6 337 82.5
BolC8t51743H Brassica oleracea HOM05D005339 ORTHO05D006561 3.2e-139 498.8 347 81.6
BcaC07g41172 Brassica carinata HOM05D005339 ORTHO05D006561 2.7e-138 495.7 331 84.6
SalBow6G1349 Salvia bowleyana HOM05D005339 ORTHO05D006561 1.8e-137 493.0 349 82.5
Mapoly0015s0022 Marchantia polymorpha HOM05D005339 ORTHO05D006561 4.0e-137 491.9 337 78.0
SMO117G0089 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 1.1e-136 490.3 337 81.3
Lj9C389T6 Lonicera japonica HOM05D005339 ORTHO05D006561 4.4e-136 488.4 377 75.9
Pp3c17_13560 Physcomitrium patens HOM05D005339 ORTHO05D006561 1.3e-135 486.9 340 78.5
AagrBONN_evm.TU.Sc2ySwM_344.4430 Anthoceros agrestis HOM05D005339 ORTHO05D006561 2.8e-135 485.7 337 81.6
BraA09t41237Z Brassica rapa HOM05D005339 ORTHO05D006561 6.3e-135 484.6 367 77.4
Ah.01g009160 Amaranthus hybridus HOM05D005339 ORTHO05D006561 1.8e-134 483.0 337 80.7
FAN23G1071 Fragaria x ananassa HOM05D005339 ORTHO05D006561 9.1e-134 480.7 337 82.2
FAN28G0542 Fragaria x ananassa HOM05D005339 ORTHO05D006561 3.2e-131 472.2 366 76.2
FAN28G2786 Fragaria x ananassa HOM05D005339 ORTHO05D006561 3.2e-131 472.2 366 76.2
Haze_02197 Corylus avellana HOM05D005339 ORTHO05D006561 7.2e-131 471.1 337 73.3
TAR376G0223 Trochodendron aralioides HOM05D005339 ORTHO05D006561 2.2e-127 459.5 305 86.6
A04p15920 Brassica napus HOM05D005339 ORTHO05D006561 7.0e-126 454.5 338 79.0
AUR62013089 Chenopodium quinoa HOM05D005339 ORTHO05D006561 5.9e-125 451.4 337 77.7
TPR.G17076 Trifolium pratense HOM05D005339 ORTHO05D006561 6.5e-124 448.0 284 90.1
Lsat_1_v5_gn_3_45301 Lactuca sativa HOM05D005339 ORTHO05D006561 3.4e-120 435.6 334 79.3
EL10Ac9g21438 Beta vulgaris HOM05D005339 ORTHO05D006561 3.1e-118 429.1 352 72.4
Manes.11G090000 Manihot esculenta HOM05D005339 ORTHO05D006561 7.7e-117 424.5 274 89.8
BraA04t17225Z Brassica rapa HOM05D005339 ORTHO05D006561 3.8e-116 422.2 516 54.8
Sc08g0003210 Simmondsia chinensis HOM05D005339 ORTHO05D006561 4.1e-110 402.1 223 87.0
FAN19G3054 Fragaria x ananassa HOM05D005339 ORTHO05D006561 3.9e-108 395.6 339 73.5
Cpa.g.sc37.191 Carica papaya HOM05D005339 ORTHO05D006561 2.0e-104 383.3 321 74.1
MELO3C020783.2 Cucumis melo HOM05D005339 ORTHO05D006561 4.6e-101 372.1 255 87.5
COL.COLO4_17257 Corchorus olitorius HOM05D005339 ORTHO05D003646 7.3e-99 364.8 320 71.9
FAN26G3137 Fragaria x ananassa HOM05D005339 ORTHO05D006561 1.1e-94 350.9 337 65.9
Pp3c2_11550 Physcomitrium patens HOM05D005339 ORTHO05D006561 7.1e-94 348.2 277 73.6
HPP92_028582 Vanilla planifolia HOM05D005339 ORTHO05D006561 2.5e-91 339.7 337 65.0
Cre07.g341300 Chlamydomonas reinhardtii HOM05D005339 ORTHO05D006561 7.6e-88 328.2 382 48.7
VMungo0251G1189 Vigna mungo HOM05D005339 ORTHO05D006561 1.4e-81 307.4 147 98.0
MCO15G465 Micromonas commoda HOM05D005339 ORTHO05D006561 5.8e-80 302.0 330 51.8
QL11p047601 Quercus lobata HOM05D005339 ORTHO05D006561 1.5e-67 260.8 180 73.3
SEGI_00782 Sequoiadendron giganteum HOM05D005339 ORTHO05D006561 1.4e-62 244.2 211 75.8
PRCOL_00006995 Prasinoderma coloniale HOM05D005339 ORTHO05D006561 3.9e-60 236.1 328 46.0
CBR_g47091 Chara braunii HOM05D005339 ORTHO05D006561 1.8e-52 210.7 116 85.3
CARHR112000 Cardamine hirsuta HOM05D005339 ORTHO05D006561 9.3e-46 188.3 165 68.5
CSS0019608 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 1.3e-42 177.9 82 98.8
CSS0027179 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 7.7e-40 168.7 91 91.2
VMungo0251G1261 Vigna mungo HOM05D005339 ORTHO05D006561 3.9e-36 156.4 88 94.3
Actinidia00595 Actinidia chinensis HOM05D005339 ORTHO05D006561 1.7e-34 151.0 88 89.8
Phvul.002G320400 Phaseolus vulgaris HOM05D005339 ORTHO05D006561 7.0e-25 119.0 320 32.2
TPR.G35331 Trifolium pratense HOM05D005339 ORTHO05D006561 8.5e-23 112.1 55 96.4
MCO03G074 Micromonas commoda HOM05D005339 ORTHO05D006561 4.8e-18 96.3 203 29.6
Cfa025584 Carpinus fangiana HOM05D005339 ORTHO05D006561 2.4e-17 94.0 240 28.8
SMO274G0062 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 4.2e-14 83.2 64 64.1
RcHm_v2.0_Chr5g0045021 Rosa chinensis HOM05D005339 ORTHO05D006561 2.3e-12 77.4 39 89.7
CSS0035622 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 5.2e-12 76.3 78 80.8
SMO301G0014 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 4.4e-11 73.2 54 66.7
TPR.G17724 Trifolium pratense HOM05D005339 ORTHO05D006561 4.4e-11 73.2 41 87.8
Migut.O00339 Erythranthe guttata HOM05D005339 ORTHO05D006561 3.7e-10 70.1 30 96.7
Actinidia00596 Actinidia chinensis HOM05D003396 ORTHO05D003646 1.4e-09 68.2 45 73.3


User provided reference genes

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