Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0062071 Lupinus albus HOM05D000578 ORTHO05D000422 8.2e-34 146.4 68 100.0
AL7G11000 Arabidopsis lyrata HOM05D000578 ORTHO05D000422 9.1e-09 63.2 67 44.8
BcaC01g00276 Brassica carinata HOM05D000578 ORTHO05D000422 9.1e-09 63.2 67 44.8
C03p77560 Brassica napus HOM05D000578 ORTHO05D000422 9.1e-09 63.2 67 44.8
BolC3t20012H Brassica oleracea HOM05D000578 ORTHO05D000422 9.1e-09 63.2 67 44.8
AT4G39070 Arabidopsis thaliana HOM05D000578 ORTHO05D000422 1.2e-08 62.8 67 44.8
Prupe.1G371100 Prunus persica HOM05D000578 ORTHO05D000422 1.6e-08 62.4 52 53.8
Sp7g36770 Schrenkiella parvula HOM05D000578 ORTHO05D000422 2.0e-08 62.0 67 43.3
BraA08t34339Z Brassica rapa HOM05D000578 ORTHO05D000422 3.5e-08 61.2 67 43.3
Migut.N03131 Erythranthe guttata HOM05D000578 ORTHO05D000422 3.5e-08 61.2 55 58.2
Ciclev10001914m.g Citrus clementina HOM05D000578 ORTHO05D000422 4.5e-08 60.8 52 53.8
arahy.Tifrunner.gnm1.ann1.W2V9C7 Arachis hypogaea HOM05D000578 ORTHO05D000422 5.9e-08 60.5 70 45.7
CARHR247690 Cardamine hirsuta HOM05D000578 ORTHO05D000422 5.9e-08 60.5 66 42.4
Cpa.g.sc150.42 Carica papaya HOM05D000578 ORTHO05D000422 5.9e-08 60.5 52 53.8
CiPaw.07G154500 Carya illinoinensis HOM05D000578 ORTHO05D000422 5.9e-08 60.5 53 56.6
HanXRQChr16g0506391 Helianthus annuus HOM05D000578 ORTHO05D000422 5.9e-08 60.5 51 52.9
TAR625G1199 Trochodendron aralioides HOM05D000578 ORTHO05D000422 5.9e-08 60.5 72 47.2
Lsat_1_v5_gn_7_92040 Lactuca sativa HOM05D000578 ORTHO05D000422 7.7e-08 60.1 51 52.9
PGR083G2656 Punica granatum HOM05D000578 ORTHO05D000422 1.0e-07 59.7 43 58.1
A08p23870 Brassica napus HOM05D000578 ORTHO05D000422 1.3e-07 59.3 67 43.3
Dinv39482 Davidia involucrata HOM05D000578 ORTHO05D000422 1.3e-07 59.3 59 45.8
Hund00226 Selenicereus undatus HOM05D000578 ORTHO05D000422 1.3e-07 59.3 58 50.0
Dinv42016 Davidia involucrata HOM05D000578 ORTHO05D000422 1.7e-07 58.9 50 54.0
ECA236G1807 Erigeron canadensis HOM05D000578 ORTHO05D000422 1.7e-07 58.9 54 53.7
Oeu030396.1 Olea europaea HOM05D000578 ORTHO05D000422 1.7e-07 58.9 40 62.5
TAR628G1437 Trochodendron aralioides HOM05D000578 ORTHO05D000422 1.7e-07 58.9 67 43.3
GSVIVG01009821001 Vitis vinifera HOM05D000578 ORTHO05D000422 1.7e-07 58.9 52 53.8
Atru.chr13.363 Acer truncatum HOM05D000578 ORTHO05D000422 2.3e-07 58.5 40 62.5
Cfa013901 Carpinus fangiana HOM05D002790 ORTHO05D003033 2.3e-07 58.5 38 60.5
Haze_22580 Corylus avellana HOM05D000578 ORTHO05D000422 2.3e-07 58.5 38 60.5
Duzib093G1942 Durio zibethinus HOM05D000578 ORTHO05D000422 2.3e-07 58.5 42 59.5
Migut.C00787 Erythranthe guttata HOM05D000578 ORTHO05D000422 2.3e-07 58.5 46 56.5
Oeu004810.1 Olea europaea HOM05D000578 ORTHO05D000422 2.3e-07 58.5 52 53.8
Actinidia02239 Actinidia chinensis HOM05D000578 ORTHO05D000422 2.9e-07 58.2 59 49.2
Aa31LG4G5770 Aethionema arabicum HOM05D000578 ORTHO05D000422 2.9e-07 58.2 61 47.5
Hma1.2p1_1386F.1_g279820 Hydrangea macrophylla HOM05D000578 ORTHO05D000422 2.9e-07 58.2 59 52.5
Medtr3g117320 Medicago truncatula HOM05D000578 ORTHO05D000422 2.9e-07 58.2 67 44.8
Potri.004G161000 Populus trichocarpa HOM05D000578 ORTHO05D000422 2.9e-07 58.2 62 41.9
Carub.0007s0093 Capsella rubella HOM05D000578 ORTHO05D000422 3.8e-07 57.8 67 41.8
Duzib116G0709 Durio zibethinus HOM05D000578 ORTHO05D000422 3.8e-07 57.8 51 54.9
Migut.B00192 Erythranthe guttata HOM05D000578 ORTHO05D000422 3.8e-07 57.8 70 44.3
Oeu018120.1 Olea europaea HOM05D000578 ORTHO05D000422 3.8e-07 57.8 47 55.3
VMungo1309G1761 Vigna mungo HOM05D000578 ORTHO05D000422 3.8e-07 57.8 67 41.8
BcaB02g07031 Brassica carinata HOM05D000578 ORTHO05D000422 5.0e-07 57.4 56 50.0
BcaNung01283 Brassica carinata HOM05D000578 ORTHO05D000422 5.0e-07 57.4 67 43.3
BcaNung01284 Brassica carinata HOM05D000578 ORTHO05D000422 5.0e-07 57.4 67 43.3
BolC1t00035H Brassica oleracea HOM05D000578 ORTHO05D000422 5.0e-07 57.4 67 43.3
BraA01t00025Z Brassica rapa HOM05D000578 ORTHO05D000422 5.0e-07 57.4 67 43.3
CANSAT25G1578 Cannabis sativa HOM05D000578 ORTHO05D000422 5.0e-07 57.4 55 50.9
Eucgr.F01617 Eucalyptus grandis HOM05D000578 ORTHO05D000422 5.0e-07 57.4 42 59.5
FvH4_2g38990 Fragaria vesca HOM05D000578 ORTHO05D000422 5.0e-07 57.4 56 48.2
FAN15G1202 Fragaria x ananassa HOM05D000578 ORTHO05D000422 5.0e-07 57.4 42 57.1
QL02p010676 Quercus lobata HOM05D000578 ORTHO05D000422 5.0e-07 57.4 57 47.4
Rhsim06G0026900 Rhododendron simsii HOM05D000578 ORTHO05D000422 5.0e-07 57.4 38 63.2
GSVIVG01024204001 Vitis vinifera HOM05D000578 ORTHO05D000422 5.0e-07 57.4 42 57.1
EL10Ac9g21668 Beta vulgaris HOM05D000578 ORTHO05D000422 6.6e-07 57.0 67 41.8
COL.COLO4_26201 Corchorus olitorius HOM05D000578 ORTHO05D000422 6.6e-07 57.0 51 52.9
Gohir.A05G188600 Gossypium hirsutum HOM05D000578 ORTHO05D000422 6.6e-07 57.0 50 52.0
Gohir.D05G191700 Gossypium hirsutum HOM05D000578 ORTHO05D000422 6.6e-07 57.0 50 52.0
Gorai.009G197000 Gossypium raimondii HOM05D000578 ORTHO05D000422 6.6e-07 57.0 50 52.0
Lj4C30T2 Lonicera japonica HOM05D000578 ORTHO05D000422 6.6e-07 57.0 61 47.5
MD15G1018700 Malus domestica HOM05D000578 ORTHO05D000422 6.6e-07 57.0 52 53.8
MD15G1019000 Malus domestica HOM05D000578 ORTHO05D000422 6.6e-07 57.0 52 53.8
Nitab4.5_0002723g0100 Nicotiana tabacum HOM05D000578 ORTHO05D000422 6.6e-07 57.0 62 50.0
vmacro04320 Vaccinium macrocarpon HOM05D000578 ORTHO05D000422 6.6e-07 57.0 60 48.3
Thecc.02G078000 Theobroma cacao HOM05D000578 ORTHO05D000422 8.6e-07 56.6 52 50.0
TAR381G1412 Trochodendron aralioides HOM05D000578 ORTHO05D000422 8.6e-07 56.6 36 63.9
vmacro21697 Vaccinium macrocarpon HOM05D000578 ORTHO05D000422 8.6e-07 56.6 58 50.0
Actinidia27861 Actinidia chinensis HOM05D000578 ORTHO05D000422 1.1e-06 56.2 64 50.0
arahy.Tifrunner.gnm1.ann1.IJP2R9 Arachis hypogaea HOM05D000578 ORTHO05D000422 1.1e-06 56.2 38 63.2
C01p00290 Brassica napus HOM05D000578 ORTHO05D000422 1.1e-06 56.2 71 43.7
Manes.04G085300 Manihot esculenta HOM05D000578 ORTHO05D000422 1.1e-06 56.2 62 43.5
Nn5g29192 Nelumbo nucifera HOM05D000578 ORTHO05D000422 1.1e-06 56.2 58 46.6
Phvul.009G004200 Phaseolus vulgaris HOM05D000578 ORTHO05D000422 1.1e-06 56.2 58 48.3
QL11p045630 Quercus lobata HOM05D000578 ORTHO05D000422 1.1e-06 56.2 49 53.1
Thecc.08G037200 Theobroma cacao HOM05D000578 ORTHO05D000422 1.1e-06 56.2 57 49.1
CAN.G847.9 Capsicum annuum HOM05D000578 ORTHO05D000422 1.5e-06 55.8 52 53.8
COL.COLO4_26015 Corchorus olitorius HOM05D000578 ORTHO05D000422 1.5e-06 55.8 49 55.1
Duzib132G0058 Durio zibethinus HOM05D000578 ORTHO05D000422 1.5e-06 55.8 49 59.2
Thhalv10026133m.g Eutrema salsugineum HOM05D000578 ORTHO05D000422 1.5e-06 55.8 67 41.8
FAN27G1259 Fragaria x ananassa HOM05D000578 ORTHO05D000422 1.5e-06 55.8 56 46.4
Nn6g32208 Nelumbo nucifera HOM05D000578 ORTHO05D000422 1.5e-06 55.8 57 49.1
THA.LOC104811400 Tarenaya hassleriana HOM05D000578 ORTHO05D000422 1.5e-06 55.8 53 47.2
MSTRG.22322 Avicennia marina HOM05D000578 ORTHO05D000422 1.9e-06 55.5 59 49.2
BcaB05g24919 Brassica carinata HOM05D000578 ORTHO05D000422 1.9e-06 55.5 49 53.1
CANSAT11G1530 Cannabis sativa HOM05D000578 ORTHO05D000422 1.9e-06 55.5 31 71.0
CiPaw.06G130800 Carya illinoinensis HOM05D000578 ORTHO05D000422 1.9e-06 55.5 55 52.7
Potri.002G028200 Populus trichocarpa HOM05D000578 ORTHO05D000422 1.9e-06 55.5 42 59.5
Potri.005G234500 Populus trichocarpa HOM05D000578 ORTHO05D000422 1.9e-06 55.5 49 51.0
Sabra05G0180800 Salix brachista HOM05D000578 ORTHO05D000422 1.9e-06 55.5 61 44.3
Sc18g0005280 Simmondsia chinensis HOM05D000578 ORTHO05D000422 1.9e-06 55.5 67 41.8
TPR.G32196 Trifolium pratense HOM05D000578 ORTHO05D000422 1.9e-06 55.5 68 44.1
BcaB03g12239 Brassica carinata HOM05D000578 ORTHO05D000422 2.5e-06 55.1 56 44.6
BcaC08g45568 Brassica carinata HOM05D000578 ORTHO05D000422 2.5e-06 55.1 61 47.5
C06p32530 Brassica napus HOM05D000578 ORTHO05D000422 2.5e-06 55.1 61 47.5
BolC6t38375H Brassica oleracea HOM05D000578 ORTHO05D000422 2.5e-06 55.1 61 47.5
Duzib248G0852 Durio zibethinus HOM05D000578 ORTHO05D000422 2.5e-06 55.1 47 53.2
Nitab4.5_0000587g0070 Nicotiana tabacum HOM05D000578 ORTHO05D000422 2.5e-06 55.1 58 48.3
Rhsim07G0244400 Rhododendron simsii HOM05D000578 ORTHO05D000422 2.5e-06 55.1 38 60.5
Sp5g30670 Schrenkiella parvula HOM05D000578 ORTHO05D000422 2.5e-06 55.1 55 49.1
Sed0001238 Sechium edule HOM05D000578 ORTHO05D000422 2.5e-06 55.1 64 45.3
SGA_v2.0_scaffold201G41316 Striga asiatica HOM05D000578 ORTHO05D000422 2.5e-06 55.1 42 61.9
Gohir.A01G003800 Gossypium hirsutum HOM05D000578 ORTHO05D000422 3.3e-06 54.7 52 51.9
Gohir.A06G006200 Gossypium hirsutum HOM05D000578 ORTHO05D000422 3.3e-06 54.7 42 52.4
Sabra02G0022200 Salix brachista HOM05D000578 ORTHO05D000422 3.3e-06 54.7 42 57.1
Atru.chr5.3111 Acer truncatum HOM05D000578 ORTHO05D000422 4.2e-06 54.3 42 57.1
CAN.G851.14 Capsicum annuum HOM05D000578 ORTHO05D000422 4.2e-06 54.3 66 42.4
CiPaw.08G062500 Carya illinoinensis HOM05D000578 ORTHO05D000422 4.2e-06 54.3 50 50.0
MBI05_g10538_MAGBIO Magnolia biondii HOM05D000578 ORTHO05D000422 4.2e-06 54.3 52 55.8
Peaxi162Scf00287g00115 Petunia axillaris HOM05D000578 ORTHO05D000422 4.2e-06 54.3 58 48.3
SalBow8G2268 Salvia bowleyana HOM05D000578 ORTHO05D000422 4.2e-06 54.3 40 57.5
Sopen01g052340 Solanum pennellii HOM05D000578 ORTHO05D000422 4.2e-06 54.3 60 50.0
AT1G75540 Arabidopsis thaliana HOM05D000578 ORTHO05D000422 5.5e-06 53.9 64 46.9
BraA07t30518Z Brassica rapa HOM05D000578 ORTHO05D000422 5.5e-06 53.9 56 48.2
Cc10_g02140 Coffea canephora HOM05D000578 ORTHO05D000422 5.5e-06 53.9 51 47.1
Thhalv10018860m.g Eutrema salsugineum HOM05D000578 ORTHO05D000422 5.5e-06 53.9 53 50.9
Glyma.04G009200 Glycine max HOM05D000578 ORTHO05D000422 5.5e-06 53.9 49 53.1
Gohir.D02G097100 Gossypium hirsutum HOM05D000578 ORTHO05D000422 5.5e-06 53.9 37 59.5
Gorai.005G110700 Gossypium raimondii HOM05D000578 ORTHO05D000422 5.5e-06 53.9 37 59.5
Nitab4.5_0000192g0010 Nicotiana tabacum HOM05D000578 ORTHO05D000422 5.5e-06 53.9 42 54.8
Solyc01g110180.4 Solanum lycopersicum HOM05D000578 ORTHO05D000422 5.5e-06 53.9 60 48.3
Solyc12g089240.2 Solanum lycopersicum HOM05D000578 ORTHO05D000422 5.5e-06 53.9 38 55.3
VMungo0647G0588 Vigna mungo HOM05D000578 ORTHO05D000422 5.5e-06 53.9 59 52.5
CAN.G170.84 Capsicum annuum HOM05D000578 ORTHO05D000422 7.2e-06 53.5 62 46.8
Ciclev10029294m.g Citrus clementina HOM05D000578 ORTHO05D000422 7.2e-06 53.5 48 47.9
Glyma.04G027000 Glycine max HOM05D000578 ORTHO05D000422 7.2e-06 53.5 40 60.0
Gohir.D06G002100 Gossypium hirsutum HOM05D000578 ORTHO05D000422 7.2e-06 53.5 51 49.0
Gorai.010G006600 Gossypium raimondii HOM05D000578 ORTHO05D000422 7.2e-06 53.5 51 49.0
Lsat_1_v5_gn_5_26000 Lactuca sativa HOM05D000578 ORTHO05D000422 7.2e-06 53.5 51 49.0
Lj4C792T3 Lonicera japonica HOM05D000578 ORTHO05D000422 7.2e-06 53.5 66 42.4
Hund06266 Selenicereus undatus HOM05D000578 ORTHO05D000422 7.2e-06 53.5 64 43.8
PGSC0003DMG400029426 Solanum tuberosum HOM05D000578 ORTHO05D000422 7.2e-06 53.5 52 50.0
SGA_v2.0_scaffold32G13201 Striga asiatica HOM05D000578 ORTHO05D000422 7.2e-06 53.5 42 54.8
BcaC08g47036 Brassica carinata HOM05D000578 ORTHO05D000422 9.5e-06 53.1 52 51.9
BcaC08g47342 Brassica carinata HOM05D000578 ORTHO05D000422 9.5e-06 53.1 52 51.9
Carub.0002s2240 Capsella rubella HOM05D000578 ORTHO05D000422 9.5e-06 53.1 53 49.1
Duzib041G0183 Durio zibethinus HOM05D000578 ORTHO05D000422 9.5e-06 53.1 57 45.6
Glyma.14G216500 Glycine max HOM05D000578 ORTHO05D000422 9.5e-06 53.1 59 50.8
Manes.11G087900 Manihot esculenta HOM05D000578 ORTHO05D000422 9.5e-06 53.1 52 50.0
PGR042G3210 Punica granatum HOM05D000578 ORTHO05D000422 9.5e-06 53.1 64 42.2
RcHm_v2.0_Chr6g0267001 Rosa chinensis HOM05D000578 ORTHO05D000422 9.5e-06 53.1 59 45.8
RcHm_v2.0_Chr6g0302091 Rosa chinensis HOM05D000578 ORTHO05D000422 9.5e-06 53.1 42 57.1
PGSC0003DMG400030958 Solanum tuberosum HOM05D000578 ORTHO05D000422 9.5e-06 53.1 52 51.9
THA.LOC104824799 Tarenaya hassleriana HOM05D000578 ORTHO05D000422 9.5e-06 53.1 70 40.0


User provided reference genes

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