Gene: Carub.0002s2240

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0002s2240
  • Transcript Identifier Carub.0002s2240.1
  • Gene Type Coding gene
  • Location scaffold_2 : 11993276-11994646 : positive

Gene Family Information

  • ID HOM05D000578
  • #Genes/#Species 962/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0002s2240.v1.1
  • pacid 39245666
  • synonym Carubv10020651m.g

Descriptions

  • Description PF00643 - B-box zinc finger (zf-B_box)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1905157
ISO
PLAZA Integrative Orthologypositive regulation of photosynthesis AT1G75540
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G75540
GO:0009641
ISO
PLAZA Integrative Orthologyshade avoidance AT1G75540
GO:0010117
ISO
PLAZA Integrative Orthologyphotoprotection AT1G75540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G75540
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G75540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000315 B-box-type zinc finger
Mapman id Description
15.5.1.1 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-DBB)