Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr10g0107611 Lupinus albus HOM05D005691 ORTHO05D007096 0.0e+00 2644.8 1318 100.0
Glyma.14G008200 Glycine max HOM05D005691 ORTHO05D007096 0.0e+00 2099.3 1325 80.6
Glyma.02G305200 Glycine max HOM05D005691 ORTHO05D007096 0.0e+00 2097.4 1325 80.3
LjContig00081g0016683 Lotus japonicus HOM05D005691 ORTHO05D007096 0.0e+00 2063.9 1324 79.2
arahy.Tifrunner.gnm1.ann1.2CK2M8 Arachis hypogaea HOM05D005691 ORTHO05D007096 0.0e+00 2055.0 1337 77.9
arahy.Tifrunner.gnm1.ann1.5BD1HA Arachis hypogaea HOM05D005691 ORTHO05D007096 0.0e+00 2051.6 1337 77.9
Phvul.008G284900 Phaseolus vulgaris HOM05D005691 ORTHO05D007096 0.0e+00 2050.0 1327 78.7
Ca_06452_v3 Cicer arietinum L. HOM05D005691 ORTHO05D007096 0.0e+00 2035.4 1325 78.8
Medtr5g097260 Medicago truncatula HOM05D005691 ORTHO05D007096 0.0e+00 2014.6 1325 78.1
Psat2g005000 Pisum sativum HOM05D005691 ORTHO05D007096 0.0e+00 2007.3 1329 77.3
TPR.G1235 Trifolium pratense HOM05D005691 ORTHO05D007096 0.0e+00 2006.1 1333 78.1
VMungo0647G0393 Vigna mungo HOM05D005691 ORTHO05D007096 0.0e+00 2005.7 1327 77.4
QL08p028494 Quercus lobata HOM05D005691 ORTHO05D007096 0.0e+00 1755.0 1330 66.9
Haze_12684 Corylus avellana HOM05D005691 ORTHO05D007096 0.0e+00 1729.1 1302 66.9
CiPaw.03G279200 Carya illinoinensis HOM05D005691 ORTHO05D007096 0.0e+00 1696.0 1330 64.2
Prupe.3G200800 Prunus persica HOM05D005691 ORTHO05D007096 0.0e+00 1688.3 1325 65.5
FvH4_6g40930 Fragaria vesca HOM05D005691 ORTHO05D007096 0.0e+00 1657.5 1325 64.1
FAN14G0170 Fragaria x ananassa HOM05D005691 ORTHO05D007096 0.0e+00 1653.6 1325 63.9
RcHm_v2.0_Chr2g0156551 Rosa chinensis HOM05D005691 ORTHO05D007096 0.0e+00 1649.0 1322 63.8
FAN05G1189 Fragaria x ananassa HOM05D005691 ORTHO05D007096 0.0e+00 1644.4 1325 63.5
MD17G1113600 Malus domestica HOM05D005691 ORTHO05D007096 0.0e+00 1642.1 1321 64.0
Thecc.01G191500 Theobroma cacao HOM05D005691 ORTHO05D007096 0.0e+00 1640.2 1334 63.8
FAN09G3499 Fragaria x ananassa HOM05D005691 ORTHO05D007096 0.0e+00 1634.0 1325 63.5
Manes.12G061100 Manihot esculenta HOM05D005691 ORTHO05D007096 0.0e+00 1631.3 1333 62.9
FAN02G1659 Fragaria x ananassa HOM05D005691 ORTHO05D007096 0.0e+00 1629.8 1340 62.9
CSS0040753 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 0.0e+00 1625.9 1336 62.3
CANSAT64G0049 Cannabis sativa HOM05D005691 ORTHO05D007096 0.0e+00 1624.8 1329 62.9
Atru.chr6.3368 Acer truncatum HOM05D005691 ORTHO05D007096 0.0e+00 1620.9 1340 63.4
Ciclev10014054m.g Citrus clementina HOM05D005691 ORTHO05D007096 0.0e+00 1617.4 1332 63.3
Gohir.A07G191000 Gossypium hirsutum HOM05D005691 ORTHO05D007096 0.0e+00 1614.7 1332 62.5
Actinidia21444 Actinidia chinensis HOM05D005691 ORTHO05D007096 0.0e+00 1603.6 1340 62.0
Lj8A134T75 Lonicera japonica HOM05D005691 ORTHO05D007096 0.0e+00 1590.9 1339 60.4
vmacro09398 Vaccinium macrocarpon HOM05D005691 ORTHO05D007096 0.0e+00 1588.2 1400 58.8
TWI18G1215 Tripterygium wilfordii HOM05D005691 ORTHO05D007096 0.0e+00 1573.1 1333 61.4
Eucgr.A01048 Eucalyptus grandis HOM05D005691 ORTHO05D007096 0.0e+00 1554.3 1331 60.1
CSS0009966 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 0.0e+00 1550.0 1291 61.6
Cc00_g04460 Coffea canephora HOM05D005691 ORTHO05D007096 0.0e+00 1549.3 1311 60.0
GSVIVG01030051001 Vitis vinifera HOM05D005691 ORTHO05D007096 0.0e+00 1541.2 1339 62.0
Sabra02G0169100 Salix brachista HOM05D005691 ORTHO05D007096 0.0e+00 1534.2 1370 59.3
PGSC0003DMG400006150 Solanum tuberosum HOM05D005691 ORTHO05D007096 0.0e+00 1534.2 1337 59.4
Peaxi162Scf00776g00233 Petunia axillaris HOM05D005691 ORTHO05D007096 0.0e+00 1531.5 1346 59.2
Potri.002G221300 Populus trichocarpa HOM05D005691 ORTHO05D007096 0.0e+00 1530.4 1297 61.1
Rhsim04G0038700 Rhododendron simsii HOM05D005691 ORTHO05D007096 0.0e+00 1526.1 1478 55.1
MELO3C024202.2 Cucumis melo HOM05D005691 ORTHO05D007096 0.0e+00 1523.5 1334 59.6
Gohir.D07G197400 Gossypium hirsutum HOM05D005691 ORTHO05D007096 0.0e+00 1523.5 1218 64.4
Sopen07g024300 Solanum pennellii HOM05D005691 ORTHO05D007096 0.0e+00 1519.6 1337 58.8
Gorai.001G221100 Gossypium raimondii HOM05D005691 ORTHO05D007096 0.0e+00 1518.8 1220 64.5
CsaV3_7G002600 Cucumis sativus L. HOM05D005691 ORTHO05D007096 0.0e+00 1516.1 1337 59.6
Nitab4.5_0009877g0010 Nicotiana tabacum HOM05D005691 ORTHO05D007096 0.0e+00 1516.1 1337 58.6
ClCG02G002780 Citrullus lanatus HOM05D005691 ORTHO05D007096 0.0e+00 1513.8 1336 59.1
Hma1.2p1_0133F.1_g061380 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 0.0e+00 1513.0 1245 61.4
PGR042G3586 Punica granatum HOM05D005691 ORTHO05D007096 0.0e+00 1509.2 1330 60.1
Sed0003649 Sechium edule HOM05D005691 ORTHO05D007096 0.0e+00 1501.9 1336 58.9
CAN.G854.9 Capsicum annuum HOM05D005691 ORTHO05D007096 0.0e+00 1500.3 1341 58.2
Nitab4.5_0000441g0080 Nicotiana tabacum HOM05D005691 ORTHO05D007096 0.0e+00 1499.6 1337 57.8
Nn1g07449 Nelumbo nucifera HOM05D005691 ORTHO05D007096 0.0e+00 1473.4 1317 58.6
Sc21g0000790 Simmondsia chinensis HOM05D005691 ORTHO05D007096 0.0e+00 1470.3 1341 57.6
Hund01594 Selenicereus undatus HOM05D005691 ORTHO05D007096 0.0e+00 1464.9 1334 57.2
EL10Ac9g22718 Beta vulgaris HOM05D005691 ORTHO05D007096 0.0e+00 1460.3 1340 56.6
ECA240G2675 Erigeron canadensis HOM05D005691 ORTHO05D007096 0.0e+00 1460.3 1335 57.5
AUR62015058 Chenopodium quinoa HOM05D005691 ORTHO05D007096 0.0e+00 1458.4 1341 56.5
AUR62017514 Chenopodium quinoa HOM05D005691 ORTHO05D007096 0.0e+00 1453.0 1341 56.2
DCAR_019708 Daucus carota HOM05D005691 ORTHO05D007096 0.0e+00 1450.6 1327 56.9
Migut.M00032 Erythranthe guttata HOM05D005691 ORTHO05D007096 0.0e+00 1448.3 1314 57.2
HanXRQChr03g0075241 Helianthus annuus HOM05D005691 ORTHO05D007096 0.0e+00 1448.3 1333 57.1
PSO675G5893 Papaver somniferum HOM05D005691 ORTHO05D007096 0.0e+00 1446.0 1341 57.0
Aqoxy4G02218 Aquilegia oxysepala HOM05D005691 ORTHO05D007096 0.0e+00 1445.6 1335 57.9
MSTRG.6644 Avicennia marina HOM05D005691 ORTHO05D007096 0.0e+00 1436.0 1332 56.4
MBI16_g26390_MAGBIO Magnolia biondii HOM05D005691 ORTHO05D007096 0.0e+00 1434.9 1324 57.1
Oeu029977.1 Olea europaea HOM05D005691 ORTHO05D007096 0.0e+00 1427.5 1331 56.3
THA.LOC104815358 Tarenaya hassleriana HOM05D005691 ORTHO05D007096 0.0e+00 1420.6 1326 56.9
Dinv07866 Davidia involucrata HOM05D005691 ORTHO05D007096 0.0e+00 1414.8 1334 56.8
Thhalv10003521m.g Eutrema salsugineum HOM05D005691 ORTHO05D007096 0.0e+00 1368.2 1312 56.2
AL3G42730 Arabidopsis lyrata HOM05D005691 ORTHO05D007096 0.0e+00 1364.4 1327 55.2
Carub.0003s2665 Capsella rubella HOM05D005691 ORTHO05D007096 0.0e+00 1358.2 1332 54.5
Lsat_1_v5_gn_9_104801 Lactuca sativa HOM05D005691 ORTHO05D007096 0.0e+00 1343.2 1318 54.6
ATR1149G135 Amborella trichopoda HOM05D005691 ORTHO05D007096 0.0e+00 1339.3 1292 54.6
Sp3g23610 Schrenkiella parvula HOM05D005691 ORTHO05D007096 0.0e+00 1337.4 1337 54.5
SGA_v2.0_scaffold73G24511 Striga asiatica HOM05D005691 ORTHO05D007096 0.0e+00 1327.8 1254 55.4
BcaB08g34496 Brassica carinata HOM05D005691 ORTHO05D007096 0.0e+00 1327.4 1332 54.7
BcaB06g26838 Brassica carinata HOM05D005691 ORTHO05D007096 0.0e+00 1317.0 1335 53.6
C03p55370 Brassica napus HOM05D005691 ORTHO05D007096 0.0e+00 1313.5 1329 53.9
BcaC01g03178 Brassica carinata HOM05D005691 ORTHO05D007096 0.0e+00 1310.8 1329 53.8
BolC3t17809H Brassica oleracea HOM05D005691 ORTHO05D007096 0.0e+00 1310.8 1329 53.8
BraA03t13590Z Brassica rapa HOM05D005691 ORTHO05D007096 0.0e+00 1309.7 1329 54.2
A03p44570 Brassica napus HOM05D005691 ORTHO05D007096 0.0e+00 1305.8 1329 54.0
SalBow7G1588 Salvia bowleyana HOM05D005691 ORTHO05D007096 0.0e+00 1297.0 1320 53.0
SGA_v2.0_scaffold292G47401 Striga asiatica HOM05D005691 ORTHO05D007096 0.0e+00 1217.6 1322 50.5
CARHR103010 Cardamine hirsuta HOM05D005691 ORTHO05D007096 0.0e+00 1189.1 1100 57.5
Os03g0225500 Oryza sativa ssp. japonica HOM05D005691 ORTHO05D007096 0.0e+00 1186.4 1320 48.8
Zm00001eb399630 Zea mays HOM05D005691 ORTHO05D007096 0.0e+00 1184.1 1298 49.8
SGA_v2.0_scaffold292G47412 Striga asiatica HOM05D005691 ORTHO05D007096 0.0e+00 1169.5 1318 48.9
SEGI_38606 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 0.0e+00 1152.1 1329 47.5
Hma1.2p1_0133F.1_g061370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 0.0e+00 1137.5 900 62.8
AT2G05120 Arabidopsis thaliana HOM05D005691 ORTHO05D007096 0.0e+00 1129.8 988 60.0
TAR626G1898 Trochodendron aralioides HOM05D005691 ORTHO05D007096 0.0e+00 1115.9 988 60.2
SHI10144 Sapria himalayana HOM05D005691 ORTHO05D007096 5.2e-310 1068.1 1249 48.9
Solyc07g047860.4 Solanum lycopersicum HOM05D005691 ORTHO05D007096 1.2e-309 1067.0 863 63.5
Mapoly0061s0124 Marchantia polymorpha HOM05D005691 ORTHO05D007096 1.9e-272 943.3 1320 41.7
BcaC06g35896 Brassica carinata HOM05D005691 ORTHO05D007096 2.2e-268 929.9 1306 44.2
SMO351G0158 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 6.3e-239 832.0 1270 40.1
unitig_746.g26642 Utricularia gibba HOM05D005691 ORTHO05D007096 6.5e-236 822.0 1298 39.7
AagrBONN_evm.TU.Sc2ySwM_362.2878 Anthoceros agrestis HOM05D005691 ORTHO05D007096 3.5e-229 799.7 1132 40.9
Pp3c21_14430 Physcomitrium patens HOM05D005691 ORTHO05D007096 2.6e-224 783.5 1278 36.2
CDE04G3337 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 2.8e-215 753.4 949 44.5
COL.COLO4_09229 Corchorus olitorius HOM05D005691 ORTHO05D007096 3.4e-160 570.5 483 61.7
HPP92_000880 Vanilla planifolia HOM05D005691 ORTHO05D007096 5.8e-160 569.7 592 50.0
COL.COLO4_09230 Corchorus olitorius HOM05D005691 ORTHO05D007096 3.8e-151 540.4 583 52.5
CBR_g39814 Chara braunii HOM05D005691 ORTHO05D007096 3.5e-120 437.6 1142 29.2
Cpa.g.sc211.12 Carica papaya HOM05D005691 ORTHO05D007096 8.8e-108 396.4 294 65.3
Cpa.g.sc211.9 Carica papaya HOM05D005691 ORTHO05D007096 1.4e-97 362.5 326 59.5
CDE04G1592 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 3.0e-87 328.2 337 51.0
HPP92_000881 Vanilla planifolia HOM05D005691 ORTHO05D007096 1.9e-86 325.5 359 50.1
SMO351G0109 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 3.5e-80 304.7 1055 27.9
C07p09910 Brassica napus HOM05D005691 ORTHO05D007096 3.6e-77 294.7 290 58.3
C07p09950 Brassica napus HOM05D005691 ORTHO05D007096 1.9e-57 229.2 312 43.6
Hma1.2p1_1825F.1_g304370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 5.6e-54 217.6 194 58.2
TAR626G0169 Trochodendron aralioides HOM05D005691 ORTHO05D007096 1.7e-50 206.1 213 48.8
BolC7t41441H Brassica oleracea HOM05D005691 ORTHO05D007096 3.5e-48 198.4 303 41.6
Hma1.2p1_0133F.1_g061390 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 7.9e-48 197.2 179 56.4
Hma1.2p1_1825F.1_g304360 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 1.3e-39 169.9 150 55.3
C07p09940 Brassica napus HOM05D005691 ORTHO05D007096 2.5e-38 165.6 119 68.1
PGR042G0477 Punica granatum HOM05D005691 ORTHO05D007096 8.2e-29 134.0 129 58.1
PGR042G0061 Punica granatum HOM05D005691 ORTHO05D007096 3.0e-23 115.5 121 50.4
MCO12G144 Micromonas commoda HOM05D005691 ORTHO05D007096 3.9e-23 115.2 657 24.5
SalBow7G3724 Salvia bowleyana HOM05D005691 ORTHO05D007096 4.7e-16 91.7 103 37.9
CSS0045948 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 1.5e-14 86.7 75 61.3
SHI10145 Sapria himalayana HOM05D005691 ORTHO05D007096 5.5e-09 68.2 101 37.6
SEGI_34592 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 7.4e-06 57.8 47 57.4


User provided reference genes

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