Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 0.0e+00 2390.5 1311 100.0
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 0.0e+00 1865.1 1315 80.6
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 0.0e+00 1744.2 1314 77.0
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 0.0e+00 1560.4 1334 69.3
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 0.0e+00 1559.3 1340 69.9
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 0.0e+00 1518.1 1336 68.3
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 0.0e+00 1494.6 1362 67.6
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 0.0e+00 1487.2 1355 66.2
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 0.0e+00 1483.8 1350 66.2
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 0.0e+00 1476.5 1343 67.7
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 0.0e+00 1469.5 1329 66.9
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 0.0e+00 1441.0 1327 66.0
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 0.0e+00 1420.6 1340 64.0
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 0.0e+00 1388.6 1330 64.8
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 0.0e+00 1215.7 1376 55.8
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 0.0e+00 1202.6 1374 56.3
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 0.0e+00 1156.4 1393 55.1
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 0.0e+00 1156.4 1393 55.3
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 0.0e+00 1155.2 1383 55.5
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 0.0e+00 1141.3 1387 55.3
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 0.0e+00 1140.2 1329 55.8
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 0.0e+00 1140.2 1385 55.9
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 0.0e+00 1125.9 1435 53.5
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 0.0e+00 1108.2 1377 54.0
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 0.0e+00 1108.2 1384 53.6
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 0.0e+00 1107.8 1355 54.2
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 0.0e+00 1101.3 1353 51.8
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 0.0e+00 1099.7 1361 53.9
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 0.0e+00 1097.0 1361 53.6
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 0.0e+00 1096.6 1361 52.7
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 0.0e+00 1095.5 1295 54.6
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 0.0e+00 1081.6 1378 53.6
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 0.0e+00 1075.5 1348 51.8
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 2.7e-311 1072.4 1375 54.2
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 6.8e-310 1067.8 1396 53.3
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 2.9e-308 1062.4 1399 52.9
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 8.3e-308 1060.8 1368 53.1
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.1e-307 1058.5 1418 52.7
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 1.2e-306 1057.0 1347 52.7
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 2.0e-306 1056.2 1348 52.6
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 1.6e-303 1046.6 1364 52.9
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 2.8e-303 1045.8 1380 52.8
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 3.1e-302 1042.3 1361 52.5
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.4e-301 1038.5 1432 52.0
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 2.2e-300 1036.2 1438 50.8
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 1.4e-299 1033.5 1376 51.3
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 4.6e-298 1028.5 1354 51.6
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 2.1e-295 1019.6 1375 51.9
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 2.8e-295 1019.2 1348 51.6
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 6.8e-294 1014.6 1394 51.2
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 2.9e-292 1009.2 1355 51.1
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 9.2e-291 1004.2 1373 50.1
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 9.2e-291 1004.2 1355 51.0
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 1.1e-286 990.7 1369 53.0
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 5.2e-286 988.4 1351 51.4
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 1.2e-285 987.3 992 59.2
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 8.4e-276 954.5 1325 50.7
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 1.2e-274 950.7 1357 49.8
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 2.3e-273 946.4 1385 47.6
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 2.5e-272 943.0 1502 46.5
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 1.1e-270 937.6 1335 49.1
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 4.0e-270 935.6 1216 50.2
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 2.3e-265 919.8 1189 54.3
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 6.4e-260 901.7 1353 46.3
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 1.6e-258 897.1 1416 47.4
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 3.3e-256 889.4 1350 45.9
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 1.4e-254 884.0 1208 52.5
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 2.2e-252 876.7 1422 48.8
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 4.9e-252 875.5 1214 48.7
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.1e-250 870.2 1150 47.4
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 7.9e-250 868.2 1374 47.0
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 3.9e-249 865.9 1151 49.3
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 3.7e-247 859.4 1032 51.1
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 2.4e-246 856.7 1411 45.2
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 7.6e-245 851.7 1374 46.9
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 1.3e-244 850.9 1208 47.2
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 1.3e-244 850.9 1348 44.7
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 1.4e-243 847.4 1341 47.1
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 1.0e-241 841.3 1377 46.0
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 3.3e-240 836.3 1390 45.6
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 5.9e-237 825.5 1363 45.0
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 1.7e-236 823.9 1408 42.8
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 2.9e-236 823.2 1395 45.7
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 9.4e-235 818.1 1399 44.4
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 2.7e-234 816.6 1358 44.7
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 2.7e-234 816.6 1358 44.7
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 1.8e-233 813.9 1360 44.5
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 2.3e-233 813.5 1360 44.3
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 5.1e-233 812.4 1399 44.3
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 1.1e-232 811.2 1366 44.1
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 9.1e-230 801.6 1282 45.6
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 2.1e-226 790.4 1367 42.4
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 3.0e-225 786.6 1492 42.0
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 2.8e-223 780.0 1070 52.2
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 3.7e-223 779.6 950 49.4
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 5.9e-221 772.3 1210 46.0
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 7.2e-219 765.4 1155 43.8
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 2.7e-218 763.5 1415 40.6
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 2.3e-217 760.4 907 49.8
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 6.7e-217 758.8 1327 40.9
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 6.7e-217 758.8 1481 41.9
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 9.1e-214 748.4 1338 45.9
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 2.2e-212 743.8 1353 44.7
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 3.1e-206 723.4 1374 44.5
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 9.1e-206 721.8 1337 45.0
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 1.3e-204 718.0 781 53.5
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 2.8e-199 700.3 1359 42.3
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 1.4e-198 698.0 1336 42.3
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 8.6e-188 662.1 1010 50.5
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 1.5e-187 661.4 1327 38.1
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 1.5e-187 661.4 1286 40.0
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 1.7e-180 637.9 1190 40.7
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.5e-179 634.8 1120 41.6
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 1.9e-179 634.4 1355 40.6
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 2.6e-176 624.0 1370 40.0
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 2.4e-174 617.5 888 45.5
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 1.1e-147 528.9 531 56.7
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.8e-146 524.2 794 44.0
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 2.6e-144 517.7 1205 36.6
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 9.3e-142 509.2 414 66.4
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 5.1e-140 503.4 1263 37.5
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 1.1e-139 502.3 1191 35.9
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 3.7e-138 497.3 1230 39.3
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 1.9e-131 474.9 903 47.0
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 1.4e-129 468.8 1225 35.6
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 2.1e-125 454.9 521 54.7
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 5.1e-116 423.7 1357 33.0
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 1.1e-107 396.0 335 64.2
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 6.3e-106 390.2 1361 31.7
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 1.2e-93 349.4 1375 31.9
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 4.1e-89 334.3 1425 29.2
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 3.2e-86 324.7 306 56.9
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 1.1e-78 299.7 1178 31.0
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.1e-70 273.1 1295 30.2
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 1.5e-70 272.7 226 65.9
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 7.8e-64 250.4 1172 28.8
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 6.2e-61 240.7 1088 28.3
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 3.4e-59 235.0 532 37.6
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 5.8e-59 234.2 952 28.2
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 8.3e-58 230.3 1133 27.4
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 2.7e-48 198.7 360 40.0
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 4.6e-48 198.0 946 26.2
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 6.6e-47 194.1 200 52.0
BcaC03g15372 Brassica carinata HOM05D001849 ORTHO05D004075 1.1e-46 193.4 797 28.2
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 4.3e-46 191.4 207 52.7
SHI29649 Sapria himalayana HOM05D001849 ORTHO05D004075 4.0e-44 184.9 450 38.0
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 2.0e-43 182.6 254 45.7
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 3.4e-43 181.8 1053 26.9
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 4.4e-43 181.4 220 48.6
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 7.6e-43 180.6 916 27.2
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 7.6e-43 180.6 855 26.0
SHI29651 Sapria himalayana HOM05D001849 ORTHO05D004075 2.1e-40 172.6 583 39.6
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 4.6e-40 171.4 206 46.1
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 6.0e-40 171.0 176 53.4
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 3.6e-37 161.8 996 24.5
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 1.8e-36 159.5 1154 24.4
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 3.1e-36 158.7 1077 25.5
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 2.2e-34 152.5 688 27.9
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 1.8e-31 142.9 742 26.4
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 1.3e-29 136.7 843 25.9
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.5e-27 129.8 1348 24.3
Nitab4.5_0006425g0080 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.1e-24 119.4 356 36.2
Oeu011104.1 Olea europaea HOM05D001849 ORTHO05D004075 2.1e-24 119.4 201 58.2
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 2.3e-23 115.9 912 24.7
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 2.3e-23 115.9 83 63.9
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 2.1e-21 109.4 152 41.4
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 8.2e-21 107.5 88 64.8
Oeu013447.1 Olea europaea HOM05D001849 ORTHO05D004075 3.1e-20 105.5 174 43.7
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 7.6e-19 100.9 174 31.0
MBI19_g29884_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 7.9e-16 90.9 119 48.7
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 1.0e-15 90.5 82 52.4
BcaB03g14986 Brassica carinata HOM05D001849 ORTHO05D004075 8.7e-15 87.4 139 41.7
Cpa.g.sc25.149 Carica papaya HOM05D020865 ORTHO05D004075 1.9e-14 86.3 120 46.7
Os10g0391100 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004075 1.9e-14 86.3 256 36.7
MCO11G122 Micromonas commoda HOM05D001849 ORTHO05D004075 8.2e-13 80.9 101 46.5
Medtr3g035000 Medicago truncatula HOM05D000079 ORTHO05D004075 1.4e-12 80.1 52 73.1
Atru.chr11.323 Acer truncatum HOM05D001849 ORTHO05D004075 5.9e-11 74.7 515 26.0
Manes.06G063600 Manihot esculenta HOM05D001849 ORTHO05D004075 2.1e-08 66.2 120 36.7
Glyma.16G010466 Glycine max HOM05D001849 ORTHO05D004075 3.0e-07 62.4 37 78.4
Nitab4.5_0004322g0030 Nicotiana tabacum HOM05D001849 ORTHO05D004075 7.4e-06 57.8 58 44.8


User provided reference genes

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