Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.5e-95 352.1 172 100.0
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.8e-94 348.6 172 99.4
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.3e-88 328.9 172 95.9
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.3e-88 328.9 172 95.9
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 6.2e-86 320.9 172 94.2
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 5.8e-84 314.3 182 85.7
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 5.8e-84 314.3 182 85.7
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 2.4e-82 308.9 182 84.1
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 4.1e-82 308.1 182 84.1
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 1.6e-81 306.2 182 83.5
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 2.7e-81 305.4 182 82.4
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 3.5e-81 305.1 182 82.4
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 1.0e-80 303.5 182 83.5
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 1.0e-80 303.5 182 82.4
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.0e-80 303.5 182 82.4
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 1.0e-80 303.5 182 82.4
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 4.3e-79 298.1 182 81.9
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 5.6e-79 297.7 182 83.0
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 2.1e-78 295.8 182 81.3
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 2.1e-78 295.8 182 82.4
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 2.8e-78 295.4 182 80.2
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 1.8e-77 292.7 171 84.2
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 4.0e-77 291.6 182 81.3
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 6.8e-77 290.8 182 80.8
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 8.9e-77 290.4 182 79.1
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 8.9e-77 290.4 182 79.1
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 8.9e-77 290.4 182 79.1
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 8.9e-77 290.4 182 79.1
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 8.9e-77 290.4 182 79.1
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 8.9e-77 290.4 182 79.1
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 2.6e-76 288.9 182 80.2
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 2.6e-76 288.9 182 80.2
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 2.6e-76 288.9 182 80.2
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 2.6e-76 288.9 182 80.2
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 2.6e-76 288.9 182 80.2
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 4.4e-76 288.1 183 79.2
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 5.8e-76 287.7 182 79.1
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 9.8e-76 287.0 182 79.7
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 1.7e-75 286.2 182 79.7
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 1.7e-75 286.2 182 79.7
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 1.7e-75 286.2 182 79.7
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 1.7e-75 286.2 182 78.6
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 7.1e-74 280.8 182 79.7
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.2e-73 280.0 168 82.1
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.2e-73 280.0 168 82.1
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 5.1e-72 274.6 176 79.0
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 1.6e-70 269.6 182 76.9
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.1e-70 269.2 183 78.7
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 6.8e-69 264.2 171 78.4
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 7.6e-68 260.8 167 80.2
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 3.5e-65 251.9 171 74.9
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 3.9e-64 248.4 182 69.8
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.1e-63 246.9 183 72.7
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 3.3e-63 245.4 155 80.6
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 4.7e-62 241.5 182 70.3
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.1e-61 238.8 164 77.4
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 4.4e-60 235.0 162 72.8
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 6.4e-59 231.1 124 90.3
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 6.0e-57 224.6 117 90.6
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 1.0e-56 223.8 117 92.3
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 1.0e-56 223.8 177 66.7
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 5.1e-56 221.5 117 91.5
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 6.6e-56 221.1 133 80.5
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.1e-55 220.3 117 90.6
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 3.3e-55 218.8 141 78.0
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-55 218.4 117 87.2
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-55 218.4 117 87.2
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-55 218.4 117 87.2
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 9.6e-55 217.2 117 87.2
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.8e-54 214.9 182 64.8
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 8.1e-54 214.2 117 85.5
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 4.0e-53 211.8 117 87.2
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 1.5e-52 209.9 172 64.0
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 5.8e-52 208.0 117 84.6
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.3e-51 206.8 172 66.3
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 2.4e-50 202.6 117 83.8
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 2.4e-50 202.6 117 83.8
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 7.1e-50 201.1 121 81.8
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.2e-49 200.3 117 82.9
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 1.6e-49 199.9 117 82.1
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 2.7e-49 199.1 113 82.3
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 4.6e-49 198.4 119 79.0
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 4.8e-46 188.3 190 53.7
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 6.2e-46 188.0 173 61.8
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.5e-44 183.3 127 74.0
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 2.6e-44 182.6 171 57.9
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 1.7e-43 179.9 124 71.8
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 2.9e-43 179.1 112 75.0
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 3.8e-43 178.7 178 46.6
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 3.8e-43 178.7 116 72.4
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 1.1e-42 177.2 188 53.7
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 2.4e-42 176.0 94 88.3
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 4.2e-42 175.3 95 89.5
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 4.2e-42 175.3 95 87.4
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 7.1e-42 174.5 94 88.3
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 9.3e-42 174.1 110 74.5
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.2e-41 173.7 95 86.3
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.2e-41 173.7 93 88.2
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 2.1e-41 172.9 120 74.2
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 2.7e-41 172.6 187 54.0
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 4.6e-41 171.8 94 88.3
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 4.6e-41 171.8 125 70.4
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 7.9e-41 171.0 95 83.2
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 7.9e-41 171.0 95 83.2
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 7.9e-41 171.0 172 57.0
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 1.3e-40 170.2 120 73.3
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.8e-40 169.9 95 86.3
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.8e-40 169.9 95 86.3
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.0e-40 169.1 120 70.8
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 3.0e-40 169.1 126 67.5
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 6.7e-40 167.9 113 74.3
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 8.7e-40 167.5 94 87.2
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.1e-39 167.2 106 78.3
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 1.1e-39 167.2 120 72.5
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 1.1e-39 167.2 120 72.5
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-39 166.8 110 77.3
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 1.5e-39 166.8 93 86.0
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 1.5e-39 166.8 95 82.1
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 5.6e-39 164.9 162 58.6
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 9.6e-39 164.1 92 84.8
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 2.1e-38 162.9 103 73.8
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 2.8e-38 162.5 117 70.9
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 2.8e-38 162.5 90 83.3
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 4.8e-38 161.8 112 75.0
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 1.1e-37 160.6 110 73.6
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 1.4e-37 160.2 183 47.0
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 2.4e-37 159.5 120 68.3
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 6.9e-37 157.9 117 69.2
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.6e-36 156.0 91 78.0
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.8e-35 152.1 84 86.9
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 8.4e-35 151.0 83 84.3
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-34 149.8 71 100.0
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-34 149.8 71 100.0
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-34 149.8 71 100.0
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-34 149.8 71 100.0
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-34 149.8 71 100.0
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-34 148.3 70 100.0
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-34 148.3 70 100.0
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-34 148.3 70 100.0
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-34 148.3 70 100.0
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-34 148.3 70 100.0
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 1.0e-32 144.1 98 75.5
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.9e-32 142.1 89 75.3
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 8.7e-32 141.0 85 80.0
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 7.4e-31 137.9 174 44.8
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.5e-28 130.2 75 81.3
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 2.5e-26 122.9 132 53.8
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 4.2e-26 122.1 78 74.4
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 1.2e-25 120.6 96 66.7
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.3e-24 116.3 118 56.8
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 2.3e-24 116.3 166 45.2
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 7.4e-23 111.3 100 60.0
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.4e-21 107.1 70 68.6
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 1.2e-20 104.0 62 77.4
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 2.0e-20 103.2 61 83.6
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 5.9e-20 101.7 91 62.6
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 1.7e-19 100.1 61 80.3
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 2.9e-19 99.4 59 83.1
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 2.9e-19 99.4 61 75.4
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 8.5e-19 97.8 60 76.7
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 8.5e-19 97.8 78 64.1
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 7.2e-18 94.7 74 62.2
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 1.2e-17 94.0 58 81.0
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.7e-17 92.0 53 84.9
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.7e-17 92.0 53 84.9
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 6.1e-17 91.7 61 73.8
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 7.9e-17 91.3 48 83.3
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 2.0e-15 86.7 52 80.8
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 4.4e-15 85.5 93 51.6
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 4.4e-15 85.5 156 38.5
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 7.4e-15 84.7 53 77.4
BolSC29t60589H Brassica oleracea HOM05D000806 ORTHO05D007429 2.8e-14 82.8 48 81.2
MD15G1388400 Malus domestica HOM05D000806 ORTHO05D007429 3.7e-14 82.4 75 60.0
BolC9t55821H Brassica oleracea HOM05D000806 ORTHO05D007429 4.8e-14 82.0 48 79.2
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 3.1e-13 79.3 49 81.6
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 4.1e-13 79.0 49 77.6
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 5.9e-12 75.1 67 64.2
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 3.2e-10 69.3 34 88.2
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 3.2e-10 69.3 34 88.2
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 5.5e-10 68.6 49 67.3
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 7.2e-10 68.2 107 43.0
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 3.6e-09 65.9 46 71.7
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 8.8e-08 61.2 29 93.1
Migut.H00990 Erythranthe guttata HOM05D000806 ORTHO05D007429 9.7e-07 57.8 33 87.9


User provided reference genes

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