Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 3.8e-128 461.5 226 100.0
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 2.0e-108 396.0 258 79.1
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 9.8e-108 393.7 258 77.5
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 1.4e-106 389.8 258 77.5
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 4.3e-103 378.3 258 74.4
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 8.1e-102 374.0 259 74.5
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 8.9e-101 370.5 257 73.2
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 8.9e-101 370.5 258 72.5
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 8.9e-101 370.5 258 73.3
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 1.2e-100 370.2 258 72.9
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 1.2e-100 370.2 259 73.7
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 1.5e-100 369.8 258 73.3
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 2.0e-100 369.4 259 74.1
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 3.4e-100 368.6 259 73.4
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 3.4e-100 368.6 258 72.9
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 1.3e-99 366.7 258 73.3
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 1.3e-99 366.7 258 73.3
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 1.7e-99 366.3 258 74.0
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 2.2e-99 365.9 259 73.4
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 2.2e-99 365.9 258 72.5
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 4.9e-99 364.8 258 72.5
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 6.4e-99 364.4 258 72.5
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 8.3e-99 364.0 258 72.1
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.4e-98 363.2 258 72.1
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 2.4e-98 362.5 265 70.6
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 7.1e-98 360.9 258 72.5
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 9.2e-98 360.5 298 64.8
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 1.2e-97 360.1 258 70.9
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 2.1e-97 359.4 258 70.5
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 1.3e-96 356.7 250 71.6
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 2.3e-96 355.9 258 70.9
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 2.3e-96 355.9 258 70.9
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 5.1e-96 354.8 256 71.5
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 5.1e-96 354.8 258 70.5
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 5.1e-96 354.8 258 70.2
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 5.1e-96 354.8 257 70.4
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 5.1e-96 354.8 258 70.9
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 6.6e-96 354.4 256 71.5
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 6.6e-96 354.4 256 70.7
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 6.6e-96 354.4 259 72.2
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 8.6e-96 354.0 258 70.5
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 8.6e-96 354.0 258 68.6
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 8.6e-96 354.0 257 70.8
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 8.6e-96 354.0 258 70.2
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 1.1e-95 353.6 258 69.8
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 1.5e-95 353.2 258 70.2
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 1.5e-95 353.2 258 69.0
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 1.9e-95 352.8 258 70.2
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 4.3e-95 351.7 258 70.5
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 5.6e-95 351.3 258 69.0
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 7.3e-95 350.9 283 66.1
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 9.5e-95 350.5 262 69.5
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 9.5e-95 350.5 259 70.7
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 9.5e-95 350.5 258 69.8
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 1.2e-94 350.1 258 70.5
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 4.7e-94 348.2 259 69.5
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 6.2e-94 347.8 261 69.3
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 6.2e-94 347.8 260 69.6
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 1.1e-93 347.1 260 68.8
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 1.4e-93 346.7 258 67.4
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 4.0e-93 345.1 262 69.1
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 5.2e-93 344.7 259 68.3
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 5.2e-93 344.7 258 68.2
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 6.8e-93 344.4 258 69.4
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 6.8e-93 344.4 260 68.5
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 8.9e-93 344.0 259 68.0
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 1.2e-92 343.6 280 65.7
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 1.2e-92 343.6 250 72.4
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 1.5e-92 343.2 279 65.6
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 1.5e-92 343.2 252 69.8
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 3.4e-92 342.0 259 67.6
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 3.4e-92 342.0 259 67.6
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 5.8e-92 341.3 260 68.1
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 7.6e-92 340.9 245 72.7
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 2.9e-91 339.0 284 64.1
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 3.7e-91 338.6 259 67.2
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 3.7e-91 338.6 258 67.4
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.4e-90 336.7 259 67.6
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 2.4e-90 335.9 259 67.2
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 2.1e-89 332.8 244 70.9
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 6.0e-89 331.3 264 66.3
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 8.6e-88 327.4 236 70.8
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.1e-87 327.0 306 60.5
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 3.6e-86 322.0 258 66.7
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 6.2e-86 321.2 250 68.4
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 8.1e-86 320.9 250 67.6
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 5.2e-85 318.2 260 64.6
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 6.8e-85 317.8 258 62.8
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 8.9e-85 317.4 259 62.9
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 4.2e-82 308.5 259 61.8
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 2.3e-80 302.8 268 62.3
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 6.6e-80 301.2 222 68.5
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 3.3e-79 298.9 223 70.0
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 3.3e-79 298.9 247 64.4
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.5e-76 290.0 260 58.8
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.5e-76 290.0 260 58.8
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 1.5e-76 290.0 259 57.9
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 7.6e-76 287.7 260 58.5
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 9.9e-76 287.3 261 56.7
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 1.2e-73 280.4 220 67.3
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 4.6e-73 278.5 276 57.2
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 1.9e-71 273.1 226 64.2
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 7.1e-66 254.6 167 74.9
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 1.1e-63 247.3 167 74.3
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 1.6e-62 243.4 167 73.1
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 3.8e-51 205.7 246 46.3
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 5.5e-50 201.8 140 71.4
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 1.5e-39 167.2 102 77.5
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 2.8e-38 162.9 103 75.7
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 1.2e-28 131.0 71 84.5
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 2.6e-28 129.8 246 32.9
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 3.6e-25 119.4 70 81.4
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 7.5e-15 85.1 102 44.1
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 9.4e-10 68.2 195 26.2
vmacro23293 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 3.7e-06 56.2 39 66.7


User provided reference genes

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