Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19359 Selenicereus undatus HOM05D006401 ORTHO05D007864 2.6e-236 821.6 404 100.0
EL10Ac2g03627 Beta vulgaris HOM05D006401 ORTHO05D007864 2.3e-139 499.6 449 59.0
AUR62020726 Chenopodium quinoa HOM05D006401 ORTHO05D007864 1.6e-132 476.9 393 61.8
Ah.11g043600 Amaranthus hybridus HOM05D006401 ORTHO05D007864 2.1e-129 466.5 411 60.6
AUR62027987 Chenopodium quinoa HOM05D006401 ORTHO05D007864 2.8e-129 466.1 396 60.6
Sc23g0004370 Simmondsia chinensis HOM05D006401 ORTHO05D007864 2.4e-125 453.0 384 61.2
Dinv12612 Davidia involucrata HOM05D006401 ORTHO05D007864 1.1e-114 417.5 428 52.6
Hma1.2p1_0314F.1_g122060 Hydrangea macrophylla HOM05D006401 ORTHO05D007864 8.1e-113 411.4 419 53.0
TAR626G0078 Trochodendron aralioides HOM05D006401 ORTHO05D007864 1.7e-110 403.7 422 52.1
Actinidia02474 Actinidia chinensis HOM05D006401 ORTHO05D007864 4.2e-109 399.1 414 51.4
GSVIVG01013042001 Vitis vinifera HOM05D006401 ORTHO05D007864 4.2e-109 399.1 403 53.1
Cc00_g00110 Coffea canephora HOM05D006401 ORTHO05D007864 7.1e-109 398.3 406 51.7
Phvul.002G302500 Phaseolus vulgaris HOM05D006401 ORTHO05D007864 3.5e-108 396.0 403 53.6
Nn8g41133 Nelumbo nucifera HOM05D006401 ORTHO05D007864 5.1e-107 392.1 428 50.5
Rhsim03G0113000 Rhododendron simsii HOM05D006401 ORTHO05D007864 1.9e-106 390.2 401 54.1
Potri.018G147400 Populus trichocarpa HOM05D006401 ORTHO05D007864 4.3e-106 389.0 453 48.6
Lj4g0001613 Lotus japonicus HOM05D006401 ORTHO05D007864 7.4e-106 388.3 413 52.8
Thecc.09G196700 Theobroma cacao HOM05D006401 ORTHO05D007864 9.6e-106 387.9 418 51.4
Manes.02G221700 Manihot esculenta HOM05D006401 ORTHO05D007864 1.6e-105 387.1 416 51.2
Gorai.012G097600 Gossypium raimondii HOM05D006401 ORTHO05D007864 1.8e-104 383.6 421 50.4
Glyma.08G027300 Glycine max HOM05D006401 ORTHO05D007864 2.4e-104 383.3 396 53.3
Lalb_Chr05g0223791 Lupinus albus HOM05D006401 ORTHO05D007864 2.4e-104 383.3 393 52.7
Aqoxy7G02629 Aquilegia oxysepala HOM05D006401 ORTHO05D007864 6.9e-104 381.7 450 48.4
Ciclev10008288m.g Citrus clementina HOM05D006401 ORTHO05D007864 9.0e-104 381.3 412 51.0
Gohir.A04G052200 Gossypium hirsutum HOM05D006401 ORTHO05D007864 1.5e-103 380.6 419 50.6
PGR044G1973 Punica granatum HOM05D006401 ORTHO05D007864 1.5e-103 380.6 428 50.2
MBI13_g31574_MAGBIO Magnolia biondii HOM05D006401 ORTHO05D007864 2.0e-103 380.2 432 48.8
Nitab4.5_0000899g0070 Nicotiana tabacum HOM05D006401 ORTHO05D007864 2.6e-103 379.8 429 49.7
Sed0005150 Sechium edule HOM05D006401 ORTHO05D007864 2.6e-103 379.8 416 51.7
Sopen07g005990 Solanum pennellii HOM05D006401 ORTHO05D007864 3.4e-103 379.4 435 48.7
Sabra18G0128800 Salix brachista HOM05D006401 ORTHO05D007864 1.0e-102 377.9 464 47.4
CsaV3_1G004580 Cucumis sativus L. HOM05D006401 ORTHO05D007864 1.3e-102 377.5 418 50.7
MD13G1232500 Malus domestica HOM05D006401 ORTHO05D007864 2.2e-102 376.7 415 50.1
Migut.J00842 Erythranthe guttata HOM05D006401 ORTHO05D007864 2.9e-102 376.3 412 50.2
Ca_17430_v3 Cicer arietinum L. HOM05D006401 ORTHO05D007864 4.9e-102 375.6 398 52.5
Ca_17439_v3 Cicer arietinum L. HOM05D006401 ORTHO05D007864 4.9e-102 375.6 398 52.5
VMungo0251G1477 Vigna mungo HOM05D006401 ORTHO05D007864 6.5e-102 375.2 452 48.7
CDE05G1304 Ceratophyllum demersum HOM05D006401 ORTHO05D007864 1.1e-101 374.4 427 48.0
Sabra18G0121600 Salix brachista HOM05D006401 ORTHO05D007864 2.5e-101 373.2 456 46.7
CANSAT80G2545 Cannabis sativa HOM05D006401 ORTHO05D007864 3.2e-101 372.9 406 50.5
HanXRQChr10g0309551 Helianthus annuus HOM05D006401 ORTHO05D007864 3.2e-101 372.9 405 50.6
QL11p008681 Quercus lobata HOM05D006401 ORTHO05D007864 1.2e-100 370.9 453 47.2
THA.LOC104826573 Tarenaya hassleriana HOM05D006401 ORTHO05D007864 1.6e-100 370.5 429 49.4
Lsat_1_v5_gn_5_80461 Lactuca sativa HOM05D006401 ORTHO05D007864 3.5e-100 369.4 397 50.4
Aa31LG8G10590 Aethionema arabicum HOM05D006401 ORTHO05D007864 6.0e-100 368.6 395 51.9
CSS0033991 Camellia sinensis var. sinensis HOM05D006401 ORTHO05D007864 6.0e-100 368.6 413 49.9
RcHm_v2.0_Chr4g0397611 Rosa chinensis HOM05D006401 ORTHO05D007864 1.3e-99 367.5 413 50.4
ECA236G1652 Erigeron canadensis HOM05D006401 ORTHO05D007864 3.0e-99 366.3 410 49.3
PSO170G1271 Papaver somniferum HOM05D006401 ORTHO05D007864 3.0e-99 366.3 421 48.5
Prupe.1G064000 Prunus persica HOM05D006401 ORTHO05D007864 3.0e-99 366.3 410 49.5
PSO063G4133 Papaver somniferum HOM05D006401 ORTHO05D007864 5.1e-99 365.5 426 49.1
MSTRG.5961 Avicennia marina HOM05D006401 ORTHO05D007864 1.5e-98 364.0 411 49.6
Nitab4.5_0008632g0020 Nicotiana tabacum HOM05D006401 ORTHO05D007864 1.9e-98 363.6 447 47.2
FvH4_4g06050 Fragaria vesca HOM05D006401 ORTHO05D007864 2.5e-98 363.2 412 49.3
Medtr8g101250 Medicago truncatula HOM05D006401 ORTHO05D007864 2.5e-98 363.2 404 50.0
FAN22G1023 Fragaria x ananassa HOM05D006401 ORTHO05D007864 2.2e-97 360.1 416 48.3
FAN12G0292 Fragaria x ananassa HOM05D006401 ORTHO05D007864 3.7e-97 359.4 425 47.5
arahy.Tifrunner.gnm1.ann1.Y2X24R Arachis hypogaea HOM05D006401 ORTHO05D007864 1.4e-96 357.5 425 49.2
Cpa.g.sc115.22 Carica papaya HOM05D006401 ORTHO05D007864 2.4e-96 356.7 400 50.5
arahy.Tifrunner.gnm1.ann1.IH6H8X Arachis hypogaea HOM05D006401 ORTHO05D007864 2.6e-95 353.2 422 48.8
SGA_v2.0_scaffold318G48475 Striga asiatica HOM05D006401 ORTHO05D007864 5.9e-95 352.1 438 45.9
AT5G35400 Arabidopsis thaliana HOM05D006401 ORTHO05D007864 2.2e-94 350.1 421 47.7
Zm00001eb274430 Zea mays HOM05D006401 ORTHO05D007864 2.9e-94 349.7 383 49.6
COL.COLO4_23416 Corchorus olitorius HOM05D006401 ORTHO05D007864 3.2e-93 346.3 387 50.1
Thhalv10003453m.g Eutrema salsugineum HOM05D006401 ORTHO05D007864 1.6e-92 344.0 418 46.9
Glyma.05G220800 Glycine max HOM05D006401 ORTHO05D007864 1.6e-92 344.0 371 52.0
AL7G44200 Arabidopsis lyrata HOM05D006401 ORTHO05D007864 4.6e-92 342.4 418 47.6
Sp7g07040 Schrenkiella parvula HOM05D006401 ORTHO05D007864 7.9e-92 341.7 418 47.4
Carub.0007s3123 Capsella rubella HOM05D006401 ORTHO05D007864 1.4e-91 340.9 414 47.3
BcaB04g18045 Brassica carinata HOM05D006401 ORTHO05D007864 1.8e-91 340.5 410 47.8
ATR0626G158 Amborella trichopoda HOM05D006401 ORTHO05D007864 6.3e-89 332.0 355 51.8
A08p09710 Brassica napus HOM05D006401 ORTHO05D007864 6.3e-89 332.0 410 48.5
BcaC07g37665 Brassica carinata HOM05D006401 ORTHO05D007864 1.4e-88 330.9 410 47.3
FAN17G0150 Fragaria x ananassa HOM05D006401 ORTHO05D007864 1.4e-88 330.9 406 46.8
CiPaw.16G104000 Carya illinoinensis HOM05D006401 ORTHO05D007864 4.1e-88 329.3 332 53.0
BraA08t32967Z Brassica rapa HOM05D006401 ORTHO05D007864 7.7e-87 325.1 434 46.1
SalBow6G4903 Salvia bowleyana HOM05D006401 ORTHO05D007864 1.1e-85 321.2 445 42.9
BolC8t48034H Brassica oleracea HOM05D006401 ORTHO05D007864 3.2e-85 319.7 440 44.8
Duzib170G0999 Durio zibethinus HOM05D006401 ORTHO05D007864 7.2e-85 318.5 420 45.0
MELO3C017384.2 Cucumis melo HOM05D006401 ORTHO05D007864 3.8e-78 296.2 466 41.0
TPR.G32971 Trifolium pratense HOM05D006401 ORTHO05D007864 8.0e-76 288.5 343 48.4
SHI03133 Sapria himalayana HOM05D006401 ORTHO05D007864 6.7e-75 285.4 384 45.3
ClCG06G014090 Citrullus lanatus HOM05D006401 ORTHO05D007864 8.2e-73 278.5 373 45.0
Gohir.D04G087600 Gossypium hirsutum HOM05D006401 ORTHO05D007864 2.3e-67 260.4 375 42.4
CARHR217420 Cardamine hirsuta HOM05D006401 ORTHO05D007864 4.1e-64 249.6 287 51.2
Psat7g020960 Pisum sativum HOM05D006401 ORTHO05D007864 1.1e-61 241.5 306 46.4
Atru.chr7.892 Acer truncatum HOM05D006401 ORTHO05D007864 1.5e-58 231.1 301 44.9
Lj9A5T15 Lonicera japonica HOM05D006401 ORTHO05D007864 1.1e-56 224.9 152 71.7
Lju50A23T26 Lonicera japonica HOM05D006401 ORTHO05D007864 1.1e-56 224.9 152 71.7
SMO232G0120 Selaginella moellendorffii HOM05D006401 ORTHO05D007864 7.2e-53 212.2 284 44.4
DCAR_010674 Daucus carota HOM05D006401 ORTHO05D007864 9.5e-53 211.8 301 43.2
Cfa020752 Carpinus fangiana HOM05D006401 ORTHO05D007864 1.4e-48 198.0 307 40.7
PGSC0003DMG401009562 Solanum tuberosum HOM05D006401 ORTHO05D007864 1.6e-47 194.5 186 52.7
Solyc07g017260.2 Solanum lycopersicum HOM05D006401 ORTHO05D007864 8.6e-46 188.7 186 52.2
CBR_g44387 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-44 184.5 495 30.5
Eucgr.C02172 Eucalyptus grandis HOM05D006401 ORTHO05D007864 4.7e-44 183.0 170 54.1
SEGI_34102 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 4.7e-44 183.0 141 67.4
Os06g0663100 Oryza sativa ssp. japonica HOM05D006401 ORTHO05D007864 6.1e-44 182.6 162 56.2
Haze_19099 Corylus avellana HOM05D006401 ORTHO05D007864 1.0e-43 181.8 277 40.8
HPP92_019927 Vanilla planifolia HOM05D006401 ORTHO05D007864 3.2e-40 170.2 165 52.1
SEGI_02756 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 2.0e-39 167.5 169 58.0
SEGI_28851 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 4.3e-37 159.8 121 68.6
FAN07G0669 Fragaria x ananassa HOM05D006401 ORTHO05D007864 1.2e-34 151.8 137 59.9
Oeu021025.1 Olea europaea HOM05D006401 ORTHO05D007864 4.3e-29 133.3 112 56.2
Lju50A23T28 Lonicera japonica HOM05D006401 ORTHO05D007864 7.3e-29 132.5 96 60.4
TPR.G25454 Trifolium pratense HOM05D006401 ORTHO05D007864 2.8e-28 130.6 75 77.3
CAN.G146.3 Capsicum annuum HOM05D006401 ORTHO05D007864 1.4e-27 128.3 82 70.7
PGSC0003DMG402009562 Solanum tuberosum HOM05D006401 ORTHO05D007864 5.2e-27 126.3 75 76.0
SEGI_09852 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 6.4e-25 119.4 179 47.5
CDE05G1402 Ceratophyllum demersum HOM05D000163 ORTHO05D007864 7.3e-21 105.9 276 34.4
Oeu036951.3 Olea europaea HOM05D006401 ORTHO05D007864 7.3e-21 105.9 292 33.2
SEGI_04184 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 7.3e-21 105.9 74 70.3
Solyc07g017250.4 Solanum lycopersicum HOM05D006401 ORTHO05D007864 1.4e-19 101.7 87 59.8
Aa31sc608G30 Aethionema arabicum HOM05D006401 ORTHO05D007864 2.0e-18 97.8 73 67.1
MCO14G313 Micromonas commoda HOM05D006401 ORTHO05D007864 2.0e-18 97.8 161 41.6
Nn8g41111 Nelumbo nucifera HOM05D006401 ORTHO05D007864 2.4e-11 74.3 69 50.7
Oeu021024.1 Olea europaea HOM05D006401 ORTHO05D007864 2.4e-11 74.3 54 61.1
SEGI_39788 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 5.8e-10 69.7 48 75.0
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 3.2e-08 63.9 311 25.4
Cre01.g021900 Chlamydomonas reinhardtii HOM05D006401 ORTHO05D007864 5.4e-08 63.2 70 55.7
MELO3C009013.2 Cucumis melo HOM05D006401 ORTHO05D007864 5.4e-08 63.2 45 66.7
QL06p014362 Quercus lobata HOM05D006708 ORTHO05D008321 1.6e-07 61.6 274 25.9
AL3G18120 Arabidopsis lyrata HOM05D006708 ORTHO05D008321 3.5e-07 60.5 276 26.4
AT3G06950 Arabidopsis thaliana HOM05D006708 ORTHO05D008321 4.6e-07 60.1 276 26.1
BraA03t12678Z Brassica rapa HOM05D006708 ORTHO05D008321 6.0e-07 59.7 275 26.2
Aa31LG5G17510 Aethionema arabicum HOM05D006708 ORTHO05D008321 1.0e-06 58.9 285 26.3
A03p34980 Brassica napus HOM05D006708 ORTHO05D008321 1.3e-06 58.5 275 25.8
Carub.0003s0647 Capsella rubella HOM05D006708 ORTHO05D008321 1.3e-06 58.5 276 25.0
C03p42560 Brassica napus HOM05D006708 ORTHO05D008321 2.3e-06 57.8 275 25.5
BolC3t16526H Brassica oleracea HOM05D006708 ORTHO05D008321 2.3e-06 57.8 275 25.5
SEGI_17053 Sequoiadendron giganteum HOM05D006401 ORTHO05D007864 2.3e-06 57.8 79 38.0
Sp3g05900 Schrenkiella parvula HOM05D006708 ORTHO05D008321 5.1e-06 56.6 275 25.1


User provided reference genes

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