Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18879 Selenicereus undatus HOM05D005584 ORTHO05D006809 8.8e-75 283.5 139 100.0
Hund25366 Selenicereus undatus HOM05D005584 ORTHO05D003410 3.7e-41 171.8 221 51.1
AUR62014068 Chenopodium quinoa HOM05D005584 ORTHO05D006809 7.5e-34 147.5 178 53.4
Oeu056410.1 Olea europaea HOM05D005584 ORTHO05D006809 4.4e-26 121.7 150 50.0
Solyc08g067820.3 Solanum lycopersicum HOM05D005584 ORTHO05D006809 5.8e-26 121.3 128 53.9
Sopen08g021760 Solanum pennellii HOM05D005584 ORTHO05D006809 5.8e-26 121.3 128 53.9
Gorai.009G374800 Gossypium raimondii HOM05D005584 ORTHO05D006809 7.6e-26 120.9 105 60.0
PGSC0003DMG400033619 Solanum tuberosum HOM05D005584 ORTHO05D006809 7.6e-26 120.9 128 53.1
vmacro01156 Vaccinium macrocarpon HOM05D005584 ORTHO05D006809 2.2e-25 119.4 135 50.4
CiPaw.05G185800 Carya illinoinensis HOM05D005584 ORTHO05D006809 3.7e-25 118.6 131 51.9
Nitab4.5_0000125g0200 Nicotiana tabacum HOM05D005584 ORTHO05D006809 3.7e-25 118.6 158 46.8
Duzib251G0376 Durio zibethinus HOM05D005584 ORTHO05D006809 4.9e-25 118.2 171 43.9
PGR142G0158 Punica granatum HOM05D005584 ORTHO05D006809 4.9e-25 118.2 176 44.3
FAN25G2737 Fragaria x ananassa HOM05D005584 ORTHO05D006809 8.4e-25 117.5 182 44.0
ECA233G2638 Erigeron canadensis HOM05D005584 ORTHO05D006809 1.1e-24 117.1 169 45.0
Gohir.D01G149500 Gossypium hirsutum HOM05D005584 ORTHO05D006809 1.9e-24 116.3 132 48.5
Lj3g0022996 Lotus japonicus HOM05D005584 ORTHO05D006809 1.9e-24 116.3 127 51.2
FAN16G0047 Fragaria x ananassa HOM05D005584 ORTHO05D006809 2.4e-24 115.9 182 42.3
Nitab4.5_0006579g0040 Nicotiana tabacum HOM05D005584 ORTHO05D006809 2.4e-24 115.9 128 51.6
FvH4_3g23340 Fragaria vesca HOM05D005584 ORTHO05D006809 3.2e-24 115.5 182 43.4
FAN11G0752 Fragaria x ananassa HOM05D005584 ORTHO05D006809 3.2e-24 115.5 182 43.4
FAN21G3548 Fragaria x ananassa HOM05D005584 ORTHO05D006809 3.2e-24 115.5 182 42.9
TAR374G1289 Trochodendron aralioides HOM05D005584 ORTHO05D006809 4.1e-24 115.2 180 45.0
Hma1.2p1_0587F.1_g184080 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 5.4e-24 114.8 180 42.8
Actinidia08155 Actinidia chinensis HOM05D005584 ORTHO05D006809 7.1e-24 114.4 181 43.6
Dinv15274 Davidia involucrata HOM05D001482 ORTHO05D001499 7.1e-24 114.4 180 41.7
MD11G1211500 Malus domestica HOM05D005584 ORTHO05D006809 7.1e-24 114.4 171 44.4
MBI10_g28000_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 9.2e-24 114.0 130 50.8
Psat2g045680 Pisum sativum HOM05D005584 ORTHO05D006809 1.2e-23 113.6 127 52.0
Migut.E00177 Erythranthe guttata HOM05D005584 ORTHO05D006809 2.1e-23 112.8 180 43.3
Eucgr.D00612 Eucalyptus grandis HOM05D005584 ORTHO05D006809 2.1e-23 112.8 113 55.8
Eucgr.K03598 Eucalyptus grandis HOM05D005584 ORTHO05D006809 2.1e-23 112.8 128 52.3
SGA_v2.0_scaffold57G20112 Striga asiatica HOM05D005584 ORTHO05D006809 2.1e-23 112.8 174 43.7
TWI18G1102 Tripterygium wilfordii HOM05D005584 ORTHO05D006809 3.5e-23 112.1 146 47.9
GSVIVG01013774001 Vitis vinifera HOM05D005584 ORTHO05D006809 3.5e-23 112.1 180 41.1
CANSAT56G2850 Cannabis sativa HOM05D005584 ORTHO05D006809 6.0e-23 111.3 150 44.0
RcHm_v2.0_Chr5g0041131 Rosa chinensis HOM05D005584 ORTHO05D006809 6.0e-23 111.3 183 41.5
arahy.Tifrunner.gnm1.ann1.0L0HR0 Arachis hypogaea HOM05D005584 ORTHO05D006809 1.0e-22 110.5 127 49.6
arahy.Tifrunner.gnm1.ann1.5FW2L6 Arachis hypogaea HOM05D005584 ORTHO05D006809 1.0e-22 110.5 127 49.6
Manes.12G026800 Manihot esculenta HOM05D005584 ORTHO05D006809 1.0e-22 110.5 176 43.2
Thecc.02G253500 Theobroma cacao HOM05D005584 ORTHO05D006809 1.0e-22 110.5 133 48.1
Glyma.12G050500 Glycine max HOM05D005584 ORTHO05D006809 1.7e-22 109.8 127 51.2
HanXRQChr12g0371541 Helianthus annuus HOM05D005584 ORTHO05D006809 1.7e-22 109.8 130 50.8
Cfa009174 Carpinus fangiana HOM05D005584 ORTHO05D006809 2.3e-22 109.4 164 42.1
Ciclev10032655m.g Citrus clementina HOM05D005584 ORTHO05D006809 2.3e-22 109.4 183 41.0
Haze_12208 Corylus avellana HOM05D005584 ORTHO05D006809 2.3e-22 109.4 130 48.5
CSS0030415 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 3.0e-22 109.0 175 42.9
Ca_28318_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 3.0e-22 109.0 127 51.2
Gohir.D08G021700 Gossypium hirsutum HOM05D005584 ORTHO05D006809 3.0e-22 109.0 132 47.0
VMungo1127G1231 Vigna mungo HOM05D005584 ORTHO05D006809 3.0e-22 109.0 127 50.4
Medtr5g077780 Medicago truncatula HOM05D005584 ORTHO05D006809 3.9e-22 108.6 127 51.2
COL.COLO4_24203 Corchorus olitorius HOM05D005584 ORTHO05D006809 5.1e-22 108.2 178 39.9
Lj1g0002439 Lotus japonicus HOM05D005584 ORTHO05D006809 8.6e-22 107.5 127 48.8
Peaxi162Scf00105g01417 Petunia axillaris HOM05D005584 ORTHO05D006809 8.6e-22 107.5 170 41.2
Gohir.A01G162200 Gossypium hirsutum HOM05D005584 ORTHO05D006809 1.1e-21 107.1 128 48.4
QL03p059496 Quercus lobata HOM05D005584 ORTHO05D006809 1.1e-21 107.1 136 47.1
Prupe.4G221000 Prunus persica HOM05D005584 ORTHO05D006809 1.9e-21 106.3 132 48.5
Atru.chr11.2060 Acer truncatum HOM05D005584 ORTHO05D006809 2.5e-21 105.9 129 46.5
Phvul.011G052800 Phaseolus vulgaris HOM05D005584 ORTHO05D006809 2.5e-21 105.9 127 48.8
Gohir.D05G347832 Gossypium hirsutum HOM05D005584 ORTHO05D006809 3.3e-21 105.5 132 46.2
Sed0009924 Sechium edule HOM05D005584 ORTHO05D006809 3.3e-21 105.5 128 48.4
AL4G22490 Arabidopsis lyrata HOM05D005584 ORTHO05D006809 4.3e-21 105.1 169 40.8
MSTRG.2403 Avicennia marina HOM05D005584 ORTHO05D006809 5.6e-21 104.8 128 49.2
CSS0021029 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 7.3e-21 104.4 132 48.5
Lsat_1_v5_gn_9_120260 Lactuca sativa HOM05D005584 ORTHO05D006809 9.6e-21 104.0 152 44.7
Carub.0004s0855 Capsella rubella HOM05D005584 ORTHO05D006809 1.2e-20 103.6 127 48.0
Lalb_Chr12g0210051 Lupinus albus HOM05D005584 ORTHO05D006809 1.6e-20 103.2 127 48.8
EL10Ac6g13701 Beta vulgaris HOM05D005584 ORTHO05D006809 3.6e-20 102.1 161 42.9
Cc08_g15830 Coffea canephora HOM05D005584 ORTHO05D006809 4.7e-20 101.7 126 47.6
BcaB02g10116 Brassica carinata HOM05D005584 ORTHO05D006809 6.2e-20 101.3 173 38.2
Nn4g22723 Nelumbo nucifera HOM05D005584 ORTHO05D006809 6.2e-20 101.3 184 38.6
Cpa.g.sc69.68 Carica papaya HOM05D005584 ORTHO05D006809 8.1e-20 100.9 130 46.9
Sp4g10620 Schrenkiella parvula HOM05D005584 ORTHO05D006809 1.4e-19 100.1 171 39.2
Potri.009G167600 Populus trichocarpa HOM05D005584 ORTHO05D006809 1.8e-19 99.8 177 40.1
Rhsim12G0043700 Rhododendron simsii HOM05D005584 ORTHO05D006809 2.4e-19 99.4 129 47.3
A07p18380 Brassica napus HOM05D005584 ORTHO05D006809 4.0e-19 98.6 128 46.1
BraA07t29554Z Brassica rapa HOM05D005584 ORTHO05D006809 4.0e-19 98.6 128 46.1
Nn2g14080 Nelumbo nucifera HOM05D005584 ORTHO05D006809 5.2e-19 98.2 159 41.5
AUR62005408 Chenopodium quinoa HOM05D005584 ORTHO05D006809 6.8e-19 97.8 161 44.1
Thhalv10017205m.g Eutrema salsugineum HOM05D005584 ORTHO05D006809 6.8e-19 97.8 170 38.8
PSO017G5970 Papaver somniferum HOM05D005584 ORTHO05D006809 6.8e-19 97.8 150 42.7
Sabra09G0130200 Salix brachista HOM05D005584 ORTHO05D006809 8.9e-19 97.4 175 37.7
CARHR120490 Cardamine hirsuta HOM05D005584 ORTHO05D006809 2.6e-18 95.9 171 39.2
unitig_62.g23668 Utricularia gibba HOM05D005584 ORTHO05D006809 2.6e-18 95.9 123 47.2
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 3.4e-18 95.5 156 41.0
BcaC02g10906 Brassica carinata HOM05D005584 ORTHO05D006809 3.4e-18 95.5 127 45.7
CsaV3_2G024710 Cucumis sativus L. HOM05D005584 ORTHO05D006809 3.4e-18 95.5 128 46.1
TPR.G25316 Trifolium pratense HOM05D005584 ORTHO05D006809 4.4e-18 95.1 121 47.9
C04p23810 Brassica napus HOM05D005584 ORTHO05D006809 9.9e-18 94.0 127 44.9
Aqoxy3G01083 Aquilegia oxysepala HOM05D005584 ORTHO05D006809 2.9e-17 92.4 126 45.2
Gorai.002G185600 Gossypium raimondii HOM05D005584 ORTHO05D006809 2.9e-17 92.4 106 48.1
ATR1091G072 Amborella trichopoda HOM05D005584 ORTHO05D006809 4.9e-17 91.7 123 45.5
BolC4t23879H Brassica oleracea HOM05D005584 ORTHO05D006809 4.9e-17 91.7 127 44.1
PSO478G2901 Papaver somniferum HOM05D005584 ORTHO05D006809 1.1e-16 90.5 149 40.9
AT5G27300 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 1.2e-15 87.0 157 38.2
SalBow8G4058 Salvia bowleyana HOM05D005584 ORTHO05D006809 1.6e-15 86.7 142 42.3
CAN.G414.8 Capsicum annuum HOM05D000928 ORTHO05D001186 4.6e-15 85.1 49 73.5
SEGI_24248 Sequoiadendron giganteum HOM05D005584 ORTHO05D006809 7.8e-15 84.3 146 40.4
Zm00001eb209860 Zea mays HOM05D005584 ORTHO05D006809 1.0e-14 84.0 161 37.3
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 2.3e-14 82.8 49 73.5
Ca_05838_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 1.1e-13 80.5 49 77.6
Potri.006G221301 Populus trichocarpa HOM05D005584 ORTHO05D006809 7.3e-13 77.8 135 41.5
HPP92_004538 Vanilla planifolia HOM05D005584 ORTHO05D006809 9.6e-13 77.4 118 41.5
SGA_v2.0_scaffold74G24685 Striga asiatica HOM05D005584 ORTHO05D006809 2.1e-12 76.3 113 43.4
Mapoly0029s0094 Marchantia polymorpha HOM05D005584 ORTHO05D006809 4.8e-12 75.1 150 35.3
CDE06G1284 Ceratophyllum demersum HOM05D005584 ORTHO05D006809 1.1e-11 73.9 49 69.4
Lsat_1_v5_gn_8_155560 Lactuca sativa HOM05D005584 ORTHO05D006809 1.1e-11 73.9 104 45.2
ClCG08G017930 Citrullus lanatus HOM05D005584 ORTHO05D006809 1.4e-11 73.6 141 37.6
MELO3C010671.2 Cucumis melo HOM05D005584 ORTHO05D006809 1.8e-11 73.2 49 67.3
Gorai.001G098200 Gossypium raimondii HOM05D005584 ORTHO05D006809 3.4e-10 68.9 49 67.3
BcaB06g28170 Brassica carinata HOM05D005584 ORTHO05D006809 5.8e-10 68.2 119 37.0
Lj6A807T86 Lonicera japonica HOM05D005584 ORTHO05D006809 9.9e-10 67.4 157 35.0
Pp3c16_13430 Physcomitrium patens HOM05D005584 ORTHO05D006809 9.9e-10 67.4 115 40.9
Dinv24830 Davidia involucrata HOM05D005584 ORTHO05D006809 1.1e-08 63.9 87 46.0
Hma1.2p1_0223F.1_g094390 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 4.2e-08 62.0 87 47.1
CAN.G21.11 Capsicum annuum HOM05D005584 ORTHO05D006809 3.5e-07 58.9 51 58.8
Glyma.11G125900 Glycine max HOM05D005584 ORTHO05D006809 6.0e-07 58.2 54 57.4
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 7.9e-07 57.8 109 37.6
Sc11g0001080 Simmondsia chinensis HOM05D005584 ORTHO05D006809 1.3e-06 57.0 82 47.6
SMO361G0752 Selaginella moellendorffii HOM05D005584 ORTHO05D006809 2.3e-06 56.2 40 60.0


User provided reference genes

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