Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18844 Selenicereus undatus HOM05D001948 ORTHO05D001873 1.3e-93 346.3 166 100.0
Sc12g0000670 Simmondsia chinensis HOM05D001948 ORTHO05D001873 9.9e-49 197.2 166 55.4
EL10Ac7g16171 Beta vulgaris HOM05D001948 ORTHO05D001873 4.2e-39 165.2 167 50.9
AUR62001642 Chenopodium quinoa HOM05D001948 ORTHO05D001873 1.0e-37 160.6 169 48.5
GSVIVG01024737001 Vitis vinifera HOM05D001948 ORTHO05D001873 1.3e-37 160.2 168 50.0
AUR62020135 Chenopodium quinoa HOM05D001948 ORTHO05D001873 3.9e-37 158.7 169 48.5
TAR633G1533 Trochodendron aralioides HOM05D001948 ORTHO05D001873 3.9e-37 158.7 165 47.9
CSS0014491 Camellia sinensis var. sinensis HOM05D001948 ORTHO05D001873 1.3e-35 153.7 166 47.6
Actinidia16096 Actinidia chinensis HOM05D001948 ORTHO05D001873 2.4e-34 149.4 166 45.8
Prupe.6G057100 Prunus persica HOM05D001948 ORTHO05D001873 6.9e-34 147.9 166 44.0
Duzib168G1714 Durio zibethinus HOM05D001948 ORTHO05D001873 1.2e-33 147.1 166 47.0
Eucgr.J01909 Eucalyptus grandis HOM05D001948 ORTHO05D001873 1.5e-33 146.7 197 42.1
Potri.001G251900 Populus trichocarpa HOM05D001948 ORTHO05D001873 3.4e-33 145.6 166 47.6
PGR119G1768 Punica granatum HOM05D001948 ORTHO05D001873 3.4e-33 145.6 167 46.7
Aqoxy4G02557 Aquilegia oxysepala HOM05D001948 ORTHO05D001873 7.6e-33 144.4 166 45.2
vmacro02959 Vaccinium macrocarpon HOM05D001948 ORTHO05D001873 1.0e-32 144.1 166 42.2
MD11G1073800 Malus domestica HOM05D001948 ORTHO05D001873 1.3e-32 143.7 166 44.6
TWI31G0364 Tripterygium wilfordii HOM05D001948 ORTHO05D001873 2.9e-32 142.5 170 45.9
Haze_24330 Corylus avellana HOM05D001948 ORTHO05D001873 4.9e-32 141.7 167 43.7
Dinv28643 Davidia involucrata HOM05D001948 ORTHO05D001873 4.9e-32 141.7 170 44.7
RcHm_v2.0_Chr5g0069661 Rosa chinensis HOM05D001948 ORTHO05D001873 6.5e-32 141.4 166 41.6
Nn2g13714 Nelumbo nucifera HOM05D001948 ORTHO05D001873 8.4e-32 141.0 165 43.0
Hma1.2p1_0962F.1_g241890 Hydrangea macrophylla HOM05D001948 ORTHO05D001873 3.2e-31 139.0 165 43.6
Ciclev10030173m.g Citrus clementina HOM05D001948 ORTHO05D001873 4.2e-31 138.7 164 43.9
Thecc.09G301400 Theobroma cacao HOM05D001948 ORTHO05D001873 4.2e-31 138.7 166 44.6
QL01p038315 Quercus lobata HOM05D001948 ORTHO05D001873 5.5e-31 138.3 166 42.2
CiPaw.13G077200 Carya illinoinensis HOM05D001948 ORTHO05D001873 9.3e-31 137.5 166 44.0
Rhsim04G0128400 Rhododendron simsii HOM05D001948 ORTHO05D001873 1.6e-30 136.7 165 43.6
TAR636G0792 Trochodendron aralioides HOM05D001948 ORTHO05D001873 1.6e-30 136.7 166 43.4
CSS0038822 Camellia sinensis var. sinensis HOM05D001948 ORTHO05D001873 2.1e-30 136.3 165 41.8
COL.COLO4_19162 Corchorus olitorius HOM05D000683 ORTHO05D000507 6.0e-30 134.8 168 44.6
MBI18_g24469_MAGBIO Magnolia biondii HOM05D001948 ORTHO05D001873 1.0e-29 134.0 165 41.8
Actinidia20734 Actinidia chinensis HOM05D001948 ORTHO05D001873 1.3e-29 133.7 165 41.2
Glyma.18G201500 Glycine max HOM05D001948 ORTHO05D001873 1.3e-29 133.7 165 41.8
vmacro08875 Vaccinium macrocarpon HOM05D001948 ORTHO05D001873 1.3e-29 133.7 165 43.0
Dinv01590 Davidia involucrata HOM05D001948 ORTHO05D001873 2.3e-29 132.9 165 43.6
Dinv05133 Davidia involucrata HOM05D001948 ORTHO05D001873 2.3e-29 132.9 165 43.0
Dinv23109 Davidia involucrata HOM05D001948 ORTHO05D001873 2.3e-29 132.9 165 43.6
Duzib170G0625 Durio zibethinus HOM05D001948 ORTHO05D001873 2.3e-29 132.9 166 41.6
Manes.01G161200 Manihot esculenta HOM05D001948 ORTHO05D001873 2.3e-29 132.9 165 42.4
Duzib093G1794 Durio zibethinus HOM05D001948 ORTHO05D001873 3.0e-29 132.5 165 42.4
FAN21G1884 Fragaria x ananassa HOM05D001948 ORTHO05D001873 3.0e-29 132.5 166 39.8
GSVIVG01011154001 Vitis vinifera HOM05D001948 ORTHO05D001873 3.9e-29 132.1 165 41.8
Manes.09G104925 Manihot esculenta HOM05D001948 ORTHO05D001873 5.1e-29 131.7 163 41.7
Phvul.008G103400 Phaseolus vulgaris HOM05D001948 ORTHO05D001873 5.1e-29 131.7 165 42.4
Psat3g129320 Pisum sativum HOM05D001948 ORTHO05D001873 5.1e-29 131.7 165 38.2
Thecc.05G015900 Theobroma cacao HOM05D001948 ORTHO05D001873 5.1e-29 131.7 165 41.8
Eucgr.K02982 Eucalyptus grandis HOM05D001948 ORTHO05D001873 6.7e-29 131.3 166 45.2
Ca_26449_v3 Cicer arietinum L. HOM05D001948 ORTHO05D001873 8.7e-29 131.0 165 39.4
Nn2g11506 Nelumbo nucifera HOM05D001948 ORTHO05D001873 8.7e-29 131.0 166 41.0
Nn2g11508 Nelumbo nucifera HOM05D001948 ORTHO05D001873 8.7e-29 131.0 166 41.0
FvH4_3g38600 Fragaria vesca HOM05D001948 ORTHO05D001873 1.1e-28 130.6 164 41.5
FAN11G1195 Fragaria x ananassa HOM05D000683 ORTHO05D000507 1.9e-28 129.8 164 39.6
FAN25G2787 Fragaria x ananassa HOM05D001948 ORTHO05D001873 7.4e-28 127.9 166 41.6
MD03G1070000 Malus domestica HOM05D001948 ORTHO05D001873 2.8e-27 125.9 166 41.6
Lj1g0003596 Lotus japonicus HOM05D001948 ORTHO05D001873 3.7e-27 125.6 165 38.2
Actinidia05366 Actinidia chinensis HOM05D001948 ORTHO05D001873 4.8e-27 125.2 165 40.0
TWI53G2049 Tripterygium wilfordii HOM05D001948 ORTHO05D001873 4.8e-27 125.2 165 39.4
Glyma.07G150500 Glycine max HOM05D001948 ORTHO05D001873 6.2e-27 124.8 165 39.4
Gohir.A05G088600 Gossypium hirsutum HOM05D001948 ORTHO05D001873 6.2e-27 124.8 169 42.6
Gorai.009G092000 Gossypium raimondii HOM05D001948 ORTHO05D001873 6.2e-27 124.8 169 42.6
Potri.006G100400 Populus trichocarpa HOM05D001948 ORTHO05D001873 8.2e-27 124.4 165 42.4
Gohir.D05G089600 Gossypium hirsutum HOM05D001948 ORTHO05D001873 1.1e-26 124.0 169 42.6
Duzib128G0126 Durio zibethinus HOM05D001948 ORTHO05D001873 1.4e-26 123.6 165 40.0
RcHm_v2.0_Chr3g0463121 Rosa chinensis HOM05D001948 ORTHO05D001873 1.4e-26 123.6 165 41.8
Prupe.6G277400 Prunus persica HOM05D001948 ORTHO05D001873 1.8e-26 123.2 165 42.4
TWI77G0956 Tripterygium wilfordii HOM05D001948 ORTHO05D001873 1.8e-26 123.2 167 41.3
Gohir.D01G217200 Gossypium hirsutum HOM05D001948 ORTHO05D001873 2.4e-26 122.9 165 40.0
PSO339G1414 Papaver somniferum HOM05D001948 ORTHO05D001873 2.4e-26 122.9 166 41.0
Cpa.g.sc112.25 Carica papaya HOM05D001948 ORTHO05D001873 3.1e-26 122.5 166 39.8
Gorai.002G263500 Gossypium raimondii HOM05D001948 ORTHO05D001873 3.1e-26 122.5 168 40.5
MD12G1166600 Malus domestica HOM05D001948 ORTHO05D001873 4.0e-26 122.1 165 43.6
Ciclev10013662m.g Citrus clementina HOM05D001948 ORTHO05D001873 5.3e-26 121.7 165 40.0
PSO801G0214 Papaver somniferum HOM05D001948 ORTHO05D001873 5.3e-26 121.7 166 40.4
Lj2C75T2 Lonicera japonica HOM05D001948 ORTHO05D001873 6.9e-26 121.3 165 38.8
COL.COLO4_14535 Corchorus olitorius HOM05D001948 ORTHO05D001873 9.0e-26 120.9 168 38.7
CiPaw.10G156700 Carya illinoinensis HOM05D001948 ORTHO05D001873 1.2e-25 120.6 165 37.0
FvH4_6g11430 Fragaria vesca HOM05D001948 ORTHO05D001873 2.0e-25 119.8 165 41.8
FAN14G5042 Fragaria x ananassa HOM05D001948 ORTHO05D001873 2.0e-25 119.8 165 41.8
FAN02G2396 Fragaria x ananassa HOM05D001948 ORTHO05D001873 2.6e-25 119.4 165 41.8
Cpa.g.sc11.143 Carica papaya HOM05D001948 ORTHO05D001873 3.4e-25 119.0 165 40.0
TPR.G8411 Trifolium pratense HOM05D001948 ORTHO05D001873 3.4e-25 119.0 193 34.7
CiPaw.09G209300 Carya illinoinensis HOM05D001948 ORTHO05D001873 4.5e-25 118.6 165 38.2
FAN09G4022 Fragaria x ananassa HOM05D001948 ORTHO05D001873 5.8e-25 118.2 165 41.2
Medtr7g068580 Medicago truncatula HOM05D001948 ORTHO05D001873 5.8e-25 118.2 165 35.8
FAN05G5492 Fragaria x ananassa HOM05D001948 ORTHO05D001873 7.6e-25 117.9 165 41.2
FAN14G4049 Fragaria x ananassa HOM05D001948 ORTHO05D001873 7.6e-25 117.9 165 41.2
Gohir.A01G227400 Gossypium hirsutum HOM05D001948 ORTHO05D001873 1.0e-24 117.5 168 38.7
Potri.016G116300 Populus trichocarpa HOM05D001948 ORTHO05D001873 2.9e-24 115.9 165 38.8
PGR004G0061 Punica granatum HOM05D001948 ORTHO05D001873 2.9e-24 115.9 165 38.8
MD04G1153100 Malus domestica HOM05D001948 ORTHO05D001873 6.5e-24 114.8 165 40.6
PSO339G0928 Papaver somniferum HOM05D001948 ORTHO05D001873 6.5e-24 114.8 177 39.0
QL07p019775 Quercus lobata HOM05D001948 ORTHO05D001873 2.5e-23 112.8 165 37.6
Atru.chr8.2243 Acer truncatum HOM05D001948 ORTHO05D001873 3.2e-23 112.5 166 36.7
Sabra06G0077200 Salix brachista HOM05D001948 ORTHO05D001873 3.2e-23 112.5 165 39.4
Cc06_g01340 Coffea canephora HOM05D001948 ORTHO05D001873 4.2e-23 112.1 165 38.2
Sabra16G0111900 Salix brachista HOM05D001948 ORTHO05D001873 4.2e-23 112.1 165 38.8
Sc01g0006430 Simmondsia chinensis HOM05D001948 ORTHO05D001873 1.2e-22 110.5 167 40.1
PSO384G0593 Papaver somniferum HOM05D001948 ORTHO05D001873 1.6e-22 110.2 177 37.9
Cc01_g14240 Coffea canephora HOM05D001948 ORTHO05D001873 2.1e-22 109.8 166 36.1
CANSAT35G0330 Cannabis sativa HOM05D001948 ORTHO05D001873 6.1e-22 108.2 165 38.2
Cfa017204 Carpinus fangiana HOM05D001948 ORTHO05D001873 7.9e-22 107.8 165 35.8
Sabra16G0153200 Salix brachista HOM05D001948 ORTHO05D001873 7.9e-22 107.8 171 43.9
arahy.Tifrunner.gnm1.ann1.VN0MC0 Arachis hypogaea HOM05D001948 ORTHO05D001873 1.0e-21 107.5 166 39.2
arahy.Tifrunner.gnm1.ann1.P8JV7Z Arachis hypogaea HOM05D001948 ORTHO05D001873 1.3e-21 107.1 166 38.6
Haze_21004 Corylus avellana HOM05D001948 ORTHO05D001873 1.8e-21 106.7 157 37.6
Ah.08g221210 Amaranthus hybridus HOM05D001948 ORTHO05D001873 2.3e-21 106.3 153 39.9
ATR0618G095 Amborella trichopoda HOM05D001948 ORTHO05D001873 5.1e-21 105.1 167 37.7
CiPaw.14G059300 Carya illinoinensis HOM05D001948 ORTHO05D001873 1.5e-20 103.6 140 40.0
Nitab4.5_0002624g0040 Nicotiana tabacum HOM05D001948 ORTHO05D001873 3.3e-20 102.4 165 37.6
Psat5g159440 Pisum sativum HOM05D001948 ORTHO05D001873 3.3e-20 102.4 171 38.6
Nitab4.5_0000490g0070 Nicotiana tabacum HOM05D001948 ORTHO05D001873 5.7e-20 101.7 165 37.6
Ah.12g058620 Amaranthus hybridus HOM05D001948 ORTHO05D001873 3.7e-19 99.0 144 36.8
Atru.chr3.4216 Acer truncatum HOM05D001948 ORTHO05D001873 6.3e-19 98.2 143 41.3
Lj6g0010194 Lotus japonicus HOM05D001948 ORTHO05D001873 6.3e-19 98.2 167 34.7
Peaxi162Scf00141g01117 Petunia axillaris HOM05D001948 ORTHO05D001873 8.2e-19 97.8 165 34.5
Sp4g20510 Schrenkiella parvula HOM05D001948 ORTHO05D001873 4.1e-18 95.5 171 33.9
Carub.0006s0038 Capsella rubella HOM05D001948 ORTHO05D001873 1.2e-17 94.0 143 35.7
THA.LOC104816193 Tarenaya hassleriana HOM05D001948 ORTHO05D001873 1.5e-17 93.6 163 34.4
DCAR_028848 Daucus carota HOM05D000768 ORTHO05D001873 2.0e-17 93.2 174 37.4
Oeu063405.1 Olea europaea HOM05D001948 ORTHO05D001873 2.0e-17 93.2 165 33.3
AT5G01450 Arabidopsis thaliana HOM05D001948 ORTHO05D001873 2.6e-17 92.8 143 35.0
BcaC01g05563 Brassica carinata HOM05D001948 ORTHO05D001873 3.4e-17 92.4 166 33.7
A03p21080 Brassica napus HOM05D001948 ORTHO05D001873 3.4e-17 92.4 166 34.9
C03p24900 Brassica napus HOM05D001948 ORTHO05D001873 3.4e-17 92.4 166 33.7
BolC3t14881H Brassica oleracea HOM05D001948 ORTHO05D001873 3.4e-17 92.4 166 33.7
TPR.G21185 Trifolium pratense HOM05D001948 ORTHO05D001873 3.4e-17 92.4 167 33.5
Hund11006 Selenicereus undatus HOM05D001948 ORTHO05D001873 4.5e-17 92.0 154 33.1
Solyc09g005320.3 Solanum lycopersicum HOM05D001948 ORTHO05D001873 4.5e-17 92.0 165 35.2
BcaB01g03724 Brassica carinata HOM05D001948 ORTHO05D001873 5.9e-17 91.7 167 35.3
AUR62030456 Chenopodium quinoa HOM05D001948 ORTHO05D001873 5.9e-17 91.7 144 34.7
Lj2A1082G54 Lonicera japonica HOM05D001948 ORTHO05D001873 5.9e-17 91.7 166 36.1
AT2G38185 Arabidopsis thaliana HOM05D001948 ORTHO05D001873 7.7e-17 91.3 166 31.9
EL10Ac5g12559 Beta vulgaris HOM05D001948 ORTHO05D001873 7.7e-17 91.3 144 34.7
AUR62010456 Chenopodium quinoa HOM05D001948 ORTHO05D001873 7.7e-17 91.3 144 34.7
VMungo1383G2266 Vigna mungo HOM05D001948 ORTHO05D001873 7.7e-17 91.3 114 43.0
AL6G10620 Arabidopsis lyrata HOM05D001948 ORTHO05D001873 1.0e-16 90.9 143 34.3
CARHR211820 Cardamine hirsuta HOM05D001948 ORTHO05D001873 1.0e-16 90.9 143 35.0
Aa31LG1G23080 Aethionema arabicum HOM05D001948 ORTHO05D002297 1.3e-16 90.5 135 34.1
Sp6g40740 Schrenkiella parvula HOM05D001948 ORTHO05D001873 1.3e-16 90.5 163 32.5
SEGI_19639 Sequoiadendron giganteum HOM05D001948 ORTHO05D001873 1.3e-16 90.5 168 33.9
SGA_v2.0_scaffold75G25020 Striga asiatica HOM05D001948 ORTHO05D001873 1.3e-16 90.5 153 34.6
AL4G35210 Arabidopsis lyrata HOM05D001948 ORTHO05D001873 1.7e-16 90.1 166 33.1
Peaxi162Scf00141g01119 Petunia axillaris HOM05D001948 ORTHO05D001873 2.2e-16 89.7 168 33.9
BcaB01g06229 Brassica carinata HOM05D001948 ORTHO05D001873 3.8e-16 89.0 136 33.8
Hund14294 Selenicereus undatus HOM05D001948 ORTHO05D001873 3.8e-16 89.0 207 29.0
A03p00300 Brassica napus HOM05D001948 ORTHO05D001873 5.0e-16 88.6 136 33.8
BraA03t11349Z Brassica rapa HOM05D001948 ORTHO05D001873 6.5e-16 88.2 160 34.4
Medtr3g463920 Medicago truncatula HOM05D001948 ORTHO05D001873 4.2e-15 85.5 145 33.8
CDE02G1590 Ceratophyllum demersum HOM05D001948 ORTHO05D001873 7.2e-15 84.7 171 30.4
Aa31LG5G23750 Aethionema arabicum HOM05D001948 ORTHO05D001873 2.1e-14 83.2 167 31.1
Aa31LG6G9270 Aethionema arabicum HOM05D001948 ORTHO05D001873 2.1e-14 83.2 135 33.3
BraA03t09421Z Brassica rapa HOM05D001948 ORTHO05D001873 2.7e-14 82.8 136 31.6
THA.LOC104807018 Tarenaya hassleriana HOM05D001948 ORTHO05D001873 4.6e-14 82.0 172 32.6
Duzib106G1953 Durio zibethinus HOM05D001948 ORTHO05D001873 1.0e-13 80.9 186 29.0
CSS0005846 Camellia sinensis var. sinensis HOM05D001948 ORTHO05D001873 9.7e-12 74.3 115 39.1
BcaB01g06098 Brassica carinata HOM05D001948 ORTHO05D001873 2.2e-11 73.2 136 28.7
C03p00470 Brassica napus HOM05D001948 ORTHO05D001873 2.2e-11 73.2 136 28.7
BolC3t12612H Brassica oleracea HOM05D001948 ORTHO05D001873 2.2e-11 73.2 136 28.7
AL4G35220 Arabidopsis lyrata HOM05D001948 ORTHO05D001873 1.8e-10 70.1 122 32.0
Thhalv10016735m.g Eutrema salsugineum HOM05D001948 ORTHO05D001873 3.1e-10 69.3 161 29.2
Migut.J00166 Erythranthe guttata HOM05D001948 ORTHO05D001873 1.5e-09 67.0 83 34.9
Carub.0004s2017 Capsella rubella HOM05D001948 ORTHO05D001873 2.0e-09 66.6 169 28.4
Carub.0004s2018 Capsella rubella HOM05D001948 ORTHO05D001873 1.0e-08 64.3 144 26.4
AT2G38220 Arabidopsis thaliana HOM05D001948 ORTHO05D001873 6.5e-08 61.6 91 34.1
Thhalv10017777m.g Eutrema salsugineum HOM05D001948 ORTHO05D001873 6.5e-08 61.6 142 33.1
AT2G38195 Arabidopsis thaliana HOM05D001948 ORTHO05D001873 8.5e-08 61.2 91 34.1
CARHR132810 Cardamine hirsuta HOM05D001948 ORTHO05D001873 8.5e-08 61.2 140 26.4
CDE02G4230 Ceratophyllum demersum HOM05D001948 ORTHO05D001873 8.5e-08 61.2 92 32.6
Actinidia38090 Actinidia chinensis HOM05D001948 ORTHO05D001873 7.2e-07 58.2 144 27.8
Nn1g04652 Nelumbo nucifera HOM05D001948 ORTHO05D001873 1.2e-06 57.4 165 30.9
Nn2g14695 Nelumbo nucifera HOM05D000084 ORTHO05D002966 1.2e-06 57.4 165 30.9
CANSAT25G1733 Cannabis sativa HOM05D001948 ORTHO05D001873 4.7e-06 55.5 140 29.3
Glyma.18G062700 Glycine max HOM05D001948 ORTHO05D001873 4.7e-06 55.5 90 33.3


User provided reference genes

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