Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 0.0e+00 1366.3 697 100.0
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 9.3e-258 893.6 710 67.0
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.3e-256 889.0 711 66.8
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 1.2e-241 840.1 690 65.7
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 4.1e-237 825.1 694 64.3
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 8.0e-217 757.7 720 57.2
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 4.1e-213 745.3 723 55.6
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 5.0e-211 738.4 716 54.9
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 8.5e-211 737.6 722 55.3
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 7.2e-210 734.6 722 55.0
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 1.8e-208 729.9 676 58.1
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 2.3e-208 729.6 689 57.8
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 8.3e-206 721.1 708 56.2
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 1.1e-205 720.7 721 53.3
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 1.4e-205 720.3 709 55.7
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 1.6e-204 716.8 719 52.9
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 5.9e-204 714.9 726 54.1
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 4.3e-202 708.8 714 53.9
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 1.6e-201 706.8 728 54.1
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 2.8e-201 706.1 708 53.8
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 2.3e-200 703.0 721 54.0
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 8.9e-200 701.0 664 56.5
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 7.5e-199 698.0 702 53.8
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 9.8e-199 697.6 739 54.1
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 1.3e-195 687.2 579 63.6
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 3.3e-194 682.6 720 51.7
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 9.5e-194 681.0 634 54.6
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 9.5e-194 681.0 716 51.3
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 1.0e-192 677.6 705 52.9
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 1.0e-192 677.6 718 51.8
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 5.2e-192 675.2 845 46.9
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 1.5e-191 673.7 702 50.6
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 9.8e-191 671.0 724 51.8
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.3e-190 670.6 689 54.3
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 1.7e-190 670.2 662 54.4
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 1.7e-190 670.2 689 54.3
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 2.2e-190 669.8 697 52.4
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 8.3e-190 667.9 689 54.1
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 1.6e-188 663.7 632 54.4
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 2.7e-188 662.9 707 51.5
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 2.7e-188 662.9 705 51.6
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 6.0e-188 661.8 724 51.7
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 2.3e-187 659.8 677 53.2
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.3e-187 659.8 701 51.5
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 3.0e-187 659.4 653 53.6
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 1.1e-186 657.5 731 51.6
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 1.9e-186 656.8 703 51.5
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 5.6e-186 655.2 706 50.7
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 7.3e-186 654.8 707 50.8
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 9.5e-186 654.4 718 51.0
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 1.8e-184 650.2 676 53.0
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 4.0e-184 649.0 702 51.3
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 4.0e-184 649.0 682 52.1
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.5e-183 647.1 489 69.3
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 1.5e-183 647.1 724 50.4
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 2.0e-183 646.7 713 49.9
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 5.8e-183 645.2 702 50.7
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 7.5e-183 644.8 691 52.5
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 1.7e-182 643.7 723 50.1
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.7e-182 643.7 720 50.3
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 2.2e-182 643.3 713 49.9
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 6.4e-182 641.7 686 52.0
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 7.1e-181 638.3 720 50.0
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 1.2e-180 637.5 672 51.5
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.6e-180 637.1 745 48.6
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.1e-180 636.7 691 51.5
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 2.3e-179 633.3 680 50.9
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 9.5e-178 627.9 703 48.9
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 3.1e-176 622.9 702 49.3
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 1.2e-175 620.9 673 49.6
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 2.6e-175 619.8 672 49.7
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 4.4e-175 619.0 702 49.9
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 5.8e-175 618.6 644 52.0
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 1.7e-174 617.1 612 54.2
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 2.2e-174 616.7 702 48.9
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 2.9e-174 616.3 676 50.4
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 4.9e-174 615.5 674 49.6
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 4.9e-174 615.5 638 51.9
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 6.4e-174 615.1 674 49.6
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 4.1e-173 612.5 629 52.8
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 9.2e-173 611.3 623 52.3
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 1.0e-171 607.8 674 49.0
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 5.1e-171 605.5 712 50.1
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 1.9e-170 603.6 702 47.6
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 1.9e-170 603.6 704 47.4
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 4.7e-169 599.0 675 49.5
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 1.1e-168 597.8 725 47.2
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 1.5e-167 594.0 721 46.3
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 9.9e-167 591.3 705 47.4
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.4e-165 587.4 666 48.8
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 2.4e-165 586.6 646 47.4
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 3.2e-165 586.3 1056 37.2
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 1.3e-158 564.3 642 48.9
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 1.3e-155 554.3 700 45.0
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 3.5e-148 529.6 580 50.2
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 8.2e-145 518.5 684 45.9
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 4.9e-142 509.2 698 42.7
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.1e-136 491.5 628 44.4
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.5e-125 453.8 691 42.7
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 2.6e-114 417.2 712 39.0
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 3.8e-102 376.7 345 58.3
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 6.1e-92 342.8 624 36.1
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 3.0e-91 340.5 615 36.1
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 3.4e-90 337.0 338 51.2
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 4.4e-90 336.7 618 35.8
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 1.8e-88 331.3 283 59.7
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 2.3e-75 287.7 252 58.7
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 3.0e-70 270.8 623 34.0
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 4.3e-69 266.9 662 32.5
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 6.2e-68 263.1 591 32.3
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 6.2e-68 263.1 347 43.8
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 1.5e-53 215.3 613 29.9
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 8.4e-49 199.5 219 46.6
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 9.0e-35 152.9 650 24.8
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 3.3e-29 134.4 150 50.7
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 3.3e-29 134.4 194 43.3
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 3.1e-27 127.9 176 42.6
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 6.9e-27 126.7 613 26.1
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 4.5e-26 124.0 400 26.8
PRCOL_00005763 Prasinoderma coloniale HOM05D005942 ORTHO05D007209 3.5e-23 114.4 467 24.0
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 2.2e-20 105.1 160 38.8
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 2.9e-17 94.7 122 45.9
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 2.5e-13 81.6 102 47.1
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 7.4e-13 80.1 523 22.6
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 4.8e-12 77.4 85 51.8
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 4.8e-12 77.4 112 42.0
MBI15_g00935_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D016670 6.3e-12 77.0 78 48.7
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 4.5e-10 70.9 74 48.6
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 1.9e-08 65.5 117 38.5
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 1.0e-06 59.7 85 45.9


User provided reference genes

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