Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17610 Selenicereus undatus HOM05D003283 ORTHO05D018541 1.7e-73 279.3 146 100.0
Ah.05g177110 Amaranthus hybridus HOM05D003283 ORTHO05D004037 1.1e-38 163.7 137 64.2
AUR62014508 Chenopodium quinoa HOM05D003283 ORTHO05D004037 3.8e-36 155.2 137 62.8
EL10Ac1g00662 Beta vulgaris HOM05D003283 ORTHO05D004037 2.1e-34 149.4 137 62.0
AUR62038027 Chenopodium quinoa HOM05D003283 ORTHO05D004037 2.5e-32 142.5 137 59.9
Sc06g0000940 Simmondsia chinensis HOM05D003283 ORTHO05D004037 3.0e-25 119.0 135 52.6
Dinv19938 Davidia involucrata HOM05D003283 ORTHO05D004037 2.4e-22 109.4 139 47.5
Hma1.2p1_0735F.1_g210410 Hydrangea macrophylla HOM05D003283 ORTHO05D004037 2.0e-21 106.3 144 45.8
CiPaw.11G042000 Carya illinoinensis HOM05D003283 ORTHO05D004037 8.5e-20 100.9 144 45.1
Cfa018966 Carpinus fangiana HOM05D003283 ORTHO05D004037 1.9e-19 99.8 144 43.8
Haze_07348 Corylus avellana HOM05D003283 ORTHO05D004037 1.9e-19 99.8 144 43.1
Rhsim08G0157300 Rhododendron simsii HOM05D003283 ORTHO05D004037 2.5e-19 99.4 137 46.7
CSS0033711 Camellia sinensis var. sinensis HOM05D003283 ORTHO05D004037 3.2e-19 99.0 137 46.7
Peaxi162Scf00009g00230 Petunia axillaris HOM05D003283 ORTHO05D004037 5.5e-19 98.2 137 46.0
Nitab4.5_0010552g0010 Nicotiana tabacum HOM05D003283 ORTHO05D004037 7.2e-19 97.8 130 47.7
TWI60G1478 Tripterygium wilfordii HOM05D003283 ORTHO05D004037 1.2e-18 97.1 137 46.0
Actinidia04908 Actinidia chinensis HOM05D003283 ORTHO05D004037 2.7e-18 95.9 144 42.4
MD06G1190600 Malus domestica HOM05D003283 ORTHO05D004037 4.7e-18 95.1 141 44.0
PSO063G5465 Papaver somniferum HOM05D003283 ORTHO05D004037 4.7e-18 95.1 144 43.1
HanXRQChr05g0158061 Helianthus annuus HOM05D003283 ORTHO05D004037 6.1e-18 94.7 133 40.6
QL10p016258 Quercus lobata HOM05D003283 ORTHO05D004037 6.1e-18 94.7 143 46.9
ECA246G5347 Erigeron canadensis HOM05D003283 ORTHO05D004037 8.0e-18 94.4 133 43.6
AT3G47700 Arabidopsis thaliana HOM05D003283 ORTHO05D004037 1.0e-17 94.0 135 44.4
TAR371G0980 Trochodendron aralioides HOM05D003283 ORTHO05D004037 1.0e-17 94.0 138 44.2
PSO017G6266 Papaver somniferum HOM05D003283 ORTHO05D004037 1.4e-17 93.6 138 42.8
Nitab4.5_0000785g0040 Nicotiana tabacum HOM05D003283 ORTHO05D004037 1.8e-17 93.2 137 44.5
AL5G26980 Arabidopsis lyrata HOM05D003283 ORTHO05D004037 3.0e-17 92.4 135 44.4
A06p19900 Brassica napus HOM05D003283 ORTHO05D004037 3.9e-17 92.0 131 45.8
FAN08G3069 Fragaria x ananassa HOM05D003283 ORTHO05D004037 3.9e-17 92.0 124 45.2
FAN13G0270 Fragaria x ananassa HOM05D003283 ORTHO05D004037 3.9e-17 92.0 124 45.2
PSO782G0417 Papaver somniferum HOM05D003283 ORTHO05D004037 3.9e-17 92.0 132 43.2
Prupe.5G189500 Prunus persica HOM05D003283 ORTHO05D004037 3.9e-17 92.0 141 45.4
Hma1.2p1_3455F.1_g336090 Hydrangea macrophylla HOM05D003283 ORTHO05D018541 6.7e-17 91.3 112 47.3
Nn4g23104 Nelumbo nucifera HOM05D003283 ORTHO05D004037 6.7e-17 91.3 141 43.3
FAN18G1573 Fragaria x ananassa HOM05D003283 ORTHO05D004037 8.8e-17 90.9 124 45.2
EL10Ac8g20213 Beta vulgaris HOM05D003283 ORTHO05D018541 1.1e-16 90.5 79 63.3
FAN04G0644 Fragaria x ananassa HOM05D003283 ORTHO05D004037 1.1e-16 90.5 130 43.8
MD14G1197500 Malus domestica HOM05D003283 ORTHO05D004037 1.1e-16 90.5 141 43.3
BraA06t25074Z Brassica rapa HOM05D003283 ORTHO05D004037 1.5e-16 90.1 131 45.0
PGR044G0877 Punica granatum HOM05D003283 ORTHO05D004037 1.5e-16 90.1 130 43.8
Duzib084G0529 Durio zibethinus HOM05D003283 ORTHO05D004037 2.0e-16 89.7 141 44.0
Carub.0005s1383 Capsella rubella HOM05D003283 ORTHO05D004037 2.6e-16 89.4 142 45.1
Lsat_1_v5_gn_5_18780 Lactuca sativa HOM05D003283 ORTHO05D004037 2.6e-16 89.4 138 41.3
Lalb_Chr19g0125481 Lupinus albus HOM05D003283 ORTHO05D004037 3.3e-16 89.0 132 44.7
Thecc.03G083200 Theobroma cacao HOM05D003283 ORTHO05D004037 3.3e-16 89.0 141 44.7
GSVIVG01008031001 Vitis vinifera HOM05D003283 ORTHO05D004037 3.3e-16 89.0 138 42.0
BolC3t19490H Brassica oleracea HOM05D003283 ORTHO05D004037 4.4e-16 88.6 135 44.4
FvH4_5g15230 Fragaria vesca HOM05D003283 ORTHO05D004037 5.7e-16 88.2 126 45.2
Gohir.D12G179160 Gossypium hirsutum HOM05D000610 ORTHO05D001284 5.7e-16 88.2 141 43.3
Sp5g14220 Schrenkiella parvula HOM05D003283 ORTHO05D004037 5.7e-16 88.2 135 42.2
Aa31LG4G16410 Aethionema arabicum HOM05D003283 ORTHO05D004037 7.4e-16 87.8 135 43.7
Ca_22682_v3 Cicer arietinum L. HOM05D003283 ORTHO05D004037 7.4e-16 87.8 138 42.8
CARHR156380 Cardamine hirsuta HOM05D003283 ORTHO05D004037 1.3e-15 87.0 136 41.2
Medtr7g059230 Medicago truncatula HOM05D003283 ORTHO05D004037 1.3e-15 87.0 138 41.3
Ciclev10018904m.g Citrus clementina HOM05D003283 ORTHO05D004037 1.7e-15 86.7 136 41.9
Gohir.D12G179120 Gossypium hirsutum HOM05D003283 ORTHO05D018541 1.7e-15 86.7 131 43.5
MBI05_g00384_MAGBIO Magnolia biondii HOM05D003283 ORTHO05D004037 1.7e-15 86.7 144 42.4
BcaC01g01781 Brassica carinata HOM05D003283 ORTHO05D004037 2.2e-15 86.3 135 43.7
C03p71930 Brassica napus HOM05D003283 ORTHO05D004037 2.2e-15 86.3 135 43.7
CANSAT80G1070 Cannabis sativa HOM05D003283 ORTHO05D004037 2.2e-15 86.3 145 41.4
Gohir.D12G179200 Gossypium hirsutum HOM05D003283 ORTHO05D004037 2.2e-15 86.3 141 43.3
Potri.015G063100 Populus trichocarpa HOM05D003283 ORTHO05D004037 2.2e-15 86.3 137 44.5
TAR629G1579 Trochodendron aralioides HOM05D003283 ORTHO05D018541 2.2e-15 86.3 132 43.2
Gohir.A12G176200 Gossypium hirsutum HOM05D003283 ORTHO05D004037 3.7e-15 85.5 141 43.3
RcHm_v2.0_Chr7g0180931 Rosa chinensis HOM05D003283 ORTHO05D004037 3.7e-15 85.5 130 42.3
Thhalv10011079m.g Eutrema salsugineum HOM05D003283 ORTHO05D004037 8.2e-15 84.3 135 41.5
Psat3g142840 Pisum sativum HOM05D003283 ORTHO05D004037 8.2e-15 84.3 138 42.0
Sabra15G0088300 Salix brachista HOM05D003283 ORTHO05D004037 8.2e-15 84.3 137 43.1
Solyc03g113000.3 Solanum lycopersicum HOM05D003283 ORTHO05D004037 1.1e-14 84.0 139 42.4
VMungo1383G2254 Vigna mungo HOM05D003283 ORTHO05D004037 1.1e-14 84.0 134 43.3
arahy.Tifrunner.gnm1.ann1.N5P3C8 Arachis hypogaea HOM05D003283 ORTHO05D004037 1.4e-14 83.6 136 43.4
arahy.Tifrunner.gnm1.ann1.Q5PT82 Arachis hypogaea HOM05D003283 ORTHO05D004037 1.4e-14 83.6 136 43.4
Sopen03g032070 Solanum pennellii HOM05D003283 ORTHO05D004037 1.8e-14 83.2 139 42.4
CAN.G1305.11 Capsicum annuum HOM05D003283 ORTHO05D004037 3.1e-14 82.4 137 41.6
PGSC0003DMG400018089 Solanum tuberosum HOM05D003283 ORTHO05D004037 3.1e-14 82.4 139 42.4
TPR.G23258 Trifolium pratense HOM05D003283 ORTHO05D004037 3.1e-14 82.4 138 42.0
Glyma.18G175500 Glycine max HOM05D003283 ORTHO05D004037 4.1e-14 82.0 132 40.9
Phvul.008G122500 Phaseolus vulgaris HOM05D003283 ORTHO05D004037 5.3e-14 81.6 137 42.3
Glyma.08G357000 Glycine max HOM05D003283 ORTHO05D004037 7.0e-14 81.3 132 41.7
SalBow5G1222 Salvia bowleyana HOM05D003283 ORTHO05D004037 7.0e-14 81.3 124 42.7
Aqoxy3G03338 Aquilegia oxysepala HOM05D003283 ORTHO05D004037 9.1e-14 80.9 139 41.7
COL.COLO4_08427 Corchorus olitorius HOM05D003283 ORTHO05D004037 9.1e-14 80.9 131 45.8
SalBow5G0915 Salvia bowleyana HOM05D003283 ORTHO05D004037 9.1e-14 80.9 124 42.7
COL.COLO4_35507 Corchorus olitorius HOM05D003283 ORTHO05D018541 1.2e-13 80.5 130 45.4
DCAR_002380 Daucus carota HOM05D003283 ORTHO05D004037 2.0e-13 79.7 127 45.7
Atru.chr9.2284 Acer truncatum HOM05D003283 ORTHO05D004037 2.6e-13 79.3 136 38.2
Cc04_g17070 Coffea canephora HOM05D003283 ORTHO05D004037 2.6e-13 79.3 131 39.7
arahy.Tifrunner.gnm1.ann1.I6X9WR Arachis hypogaea HOM05D003283 ORTHO05D004037 3.5e-13 79.0 136 42.6
vmacro17559 Vaccinium macrocarpon HOM05D003283 ORTHO05D018541 3.5e-13 79.0 127 41.7
DCAR_009634 Daucus carota HOM05D003283 ORTHO05D004037 7.7e-13 77.8 130 41.5
Sed0015377 Sechium edule HOM05D003283 ORTHO05D004037 7.7e-13 77.8 134 40.3
SGA_v2.0_scaffold56G20036 Striga asiatica HOM05D003283 ORTHO05D004037 7.7e-13 77.8 130 41.5
THA.LOC104821426 Tarenaya hassleriana HOM05D003283 ORTHO05D004037 7.7e-13 77.8 135 41.5
ClCG02G006810 Citrullus lanatus HOM05D003283 ORTHO05D004037 1.0e-12 77.4 131 40.5
Migut.I00154 Erythranthe guttata HOM05D003283 ORTHO05D004037 1.3e-12 77.0 130 42.3
Eucgr.K02465 Eucalyptus grandis HOM05D003283 ORTHO05D004037 1.3e-12 77.0 131 38.9
arahy.Tifrunner.gnm1.ann1.TFBQ7Q Arachis hypogaea HOM05D003283 ORTHO05D004037 1.7e-12 76.6 132 40.2
BcaB01g00886 Brassica carinata HOM05D003283 ORTHO05D004037 3.8e-12 75.5 131 40.5
MELO3C018518.2 Cucumis melo HOM05D003283 ORTHO05D004037 8.5e-12 74.3 131 38.9
CsaV3_7G007830 Cucumis sativus L. HOM05D003283 ORTHO05D004037 1.1e-11 73.9 138 37.7
Lj1g0007970 Lotus japonicus HOM05D003283 ORTHO05D004037 1.9e-11 73.2 138 39.1
CDE04G2066 Ceratophyllum demersum HOM05D003283 ORTHO05D004037 1.6e-10 70.1 131 37.4
Lj9A461G45 Lonicera japonica HOM05D003283 ORTHO05D004037 1.6e-10 70.1 97 45.4
unitig_46.g18384 Utricularia gibba HOM05D003283 ORTHO05D004037 6.1e-10 68.2 130 38.5
MSTRG.11392 Avicennia marina HOM05D003283 ORTHO05D004037 1.0e-09 67.4 130 37.7
Gorai.008G191900 Gossypium raimondii HOM05D003283 ORTHO05D004037 1.4e-09 67.0 185 33.0
Os02g0748100 Oryza sativa ssp. japonica HOM05D003283 ORTHO05D004037 1.2e-08 63.9 132 34.1
Oeu037298.1 Olea europaea HOM05D003283 ORTHO05D004037 2.6e-08 62.8 131 35.9
ATR0564G097 Amborella trichopoda HOM05D003283 ORTHO05D004037 3.3e-08 62.4 136 34.6
HPP92_016453 Vanilla planifolia HOM05D003283 ORTHO05D004037 5.7e-08 61.6 130 35.4
Zm00001eb254910 Zea mays HOM05D003283 ORTHO05D004037 1.3e-07 60.5 141 34.0
HPP92_016261 Vanilla planifolia HOM05D003283 ORTHO05D004037 1.7e-07 60.1 130 35.4
ECA234G4349 Erigeron canadensis HOM05D003283 ORTHO05D004037 3.7e-07 58.9 89 42.7
CDE06G0848 Ceratophyllum demersum HOM05D003283 ORTHO05D004037 1.1e-06 57.4 131 35.1
Dinv02248 Davidia involucrata HOM05D003283 ORTHO05D004037 4.1e-06 55.5 133 30.1
SEGI_31827 Sequoiadendron giganteum HOM05D003283 ORTHO05D004037 4.1e-06 55.5 133 32.3
FAN25G1825 Fragaria x ananassa HOM05D003283 ORTHO05D018541 5.3e-06 55.1 74 41.9
CSS0046395 Camellia sinensis var. sinensis HOM05D003283 ORTHO05D004037 7.0e-06 54.7 144 30.6
Lj6g0003806 Lotus japonicus HOM05D003283 ORTHO05D004037 7.0e-06 54.7 128 33.6
Prupe.5G020200 Prunus persica HOM05D003283 ORTHO05D004037 7.0e-06 54.7 128 28.9
AUR62006591 Chenopodium quinoa HOM05D003283 ORTHO05D004037 9.1e-06 54.3 137 29.2


User provided reference genes

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