Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 7.9e-147 523.9 284 100.0
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 1.1e-116 423.7 282 74.5
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 4.8e-112 408.3 282 73.0
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 7.2e-108 394.4 284 70.8
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 9.4e-108 394.0 284 70.8
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 3.0e-106 389.0 284 70.4
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 8.8e-106 387.5 252 75.4
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 5.7e-105 384.8 251 75.3
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 7.5e-105 384.4 252 74.6
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 9.8e-105 384.0 282 71.6
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 1.3e-104 383.6 252 76.2
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 1.7e-104 383.3 252 75.4
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 8.3e-104 380.9 282 71.3
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 1.4e-103 380.2 284 68.0
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 1.4e-103 380.2 252 75.0
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 7.0e-103 377.9 267 72.7
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 9.1e-103 377.5 260 73.8
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 1.2e-102 377.1 284 66.2
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.2e-102 377.1 391 52.7
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 1.2e-102 377.1 250 74.0
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 1.6e-102 376.7 283 66.4
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 2.0e-102 376.3 252 73.8
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 3.5e-102 375.6 252 71.8
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 2.9e-101 372.5 284 66.5
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 3.8e-101 372.1 252 73.4
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 5.0e-101 371.7 275 68.7
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 8.6e-101 370.9 252 73.0
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 8.6e-101 370.9 284 66.2
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 2.5e-100 369.4 252 73.0
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 2.5e-100 369.4 284 67.6
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 2.5e-100 369.4 284 67.6
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 4.3e-100 368.6 250 72.4
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 3.6e-99 365.5 282 65.6
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 6.1e-99 364.8 282 67.7
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 1.0e-98 364.0 284 66.5
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 1.8e-98 363.2 230 77.8
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 2.3e-98 362.8 311 65.0
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 5.2e-98 361.7 282 64.2
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 8.9e-98 360.9 251 71.3
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 1.5e-97 360.1 282 63.8
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 4.4e-97 358.6 252 70.6
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 7.5e-97 357.8 241 71.8
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 1.3e-96 357.1 284 64.8
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 1.7e-96 356.7 258 69.8
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 1.7e-96 356.7 252 70.2
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.7e-96 356.7 252 70.2
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 2.2e-96 356.3 250 70.0
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 3.7e-96 355.5 251 69.3
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 6.4e-96 354.8 252 70.2
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 1.8e-95 353.2 252 71.4
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 5.4e-95 351.7 280 64.3
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 1.6e-94 350.1 280 63.9
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 1.6e-94 350.1 284 64.8
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 2.0e-94 349.7 257 67.7
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 2.0e-94 349.7 252 70.6
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 2.7e-94 349.4 246 72.0
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 7.8e-94 347.8 246 71.5
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 1.0e-93 347.4 251 68.9
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 1.3e-93 347.1 252 70.2
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 2.3e-93 346.3 254 68.1
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 3.0e-93 345.9 250 68.0
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 6.6e-93 344.7 245 71.8
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 6.6e-93 344.7 252 68.7
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 1.9e-92 343.2 251 68.9
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 3.3e-92 342.4 251 68.5
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 1.2e-91 340.5 216 75.9
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 1.2e-91 340.5 216 75.9
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 1.6e-91 340.1 251 66.5
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 3.6e-91 339.0 216 75.9
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 3.1e-90 335.9 208 76.4
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 3.1e-90 335.9 339 54.0
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 4.0e-90 335.5 252 68.3
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 1.2e-89 334.0 197 79.7
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 2.6e-89 332.8 206 77.7
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 4.4e-89 332.0 206 77.7
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 1.3e-88 330.5 251 65.7
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 1.3e-88 330.5 210 75.7
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 3.7e-88 328.9 193 79.8
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 6.4e-88 328.2 216 73.6
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 9.2e-87 324.3 250 66.4
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 9.2e-87 324.3 246 65.4
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 1.6e-86 323.6 246 66.3
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 1.6e-86 323.6 246 65.4
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 1.3e-85 320.5 253 65.6
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 1.3e-85 320.5 253 65.6
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 3.0e-85 319.3 253 65.6
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 1.1e-84 317.4 253 65.2
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 1.1e-84 317.4 253 65.2
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 9.5e-84 314.3 243 63.4
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 1.2e-83 313.9 213 70.0
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 7.5e-81 304.7 186 76.9
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 2.1e-78 296.6 214 66.8
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 4.3e-76 288.9 201 69.2
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 8.4e-72 274.6 246 58.5
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.9e-71 273.5 250 58.0
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 3.2e-71 272.7 202 68.8
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 4.1e-71 272.3 245 58.4
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 2.7e-70 269.6 291 52.9
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 4.6e-70 268.9 245 56.3
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 1.7e-69 266.9 184 73.4
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 2.3e-69 266.5 177 75.1
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 4.3e-68 262.3 251 58.6
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 8.1e-67 258.1 176 71.6
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 1.2e-65 254.2 236 55.9
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 3.4e-57 226.1 130 78.5
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 1.9e-55 220.3 130 77.7
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 3.6e-51 206.1 108 85.2
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.6e-49 199.9 163 63.2
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 3.7e-43 179.5 202 49.0
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 3.9e-37 159.5 124 70.2
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.5e-31 140.2 89 70.8
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 7.9e-30 135.2 186 46.8
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 2.2e-27 127.1 169 45.6
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 2.0e-25 120.6 190 43.7
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 4.3e-20 102.8 66 71.2
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 3.1e-18 96.7 167 34.7


User provided reference genes

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