Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10642 Selenicereus undatus HOM05D005507 ORTHO05D007316 1.5e-195 686.0 355 100.0
AUR62038110 Chenopodium quinoa HOM05D005507 ORTHO05D007316 1.2e-123 447.2 299 75.3
AUR62025794 Chenopodium quinoa HOM05D005507 ORTHO05D007316 2.5e-121 439.5 299 74.9
Hma1.2p1_0936F.1_g238770 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 1.4e-116 423.7 301 72.1
GSVIVG01034161001 Vitis vinifera HOM05D005507 ORTHO05D007316 5.3e-116 421.8 301 72.8
Manes.08G080700 Manihot esculenta HOM05D005507 ORTHO05D007316 7.6e-115 417.9 299 71.6
CiPaw.09G193400 Carya illinoinensis HOM05D005507 ORTHO05D007316 1.3e-114 417.2 301 70.8
Gorai.006G172300 Gossypium raimondii HOM05D005507 ORTHO05D007316 3.8e-114 415.6 299 71.2
CSS0025531 Camellia sinensis var. sinensis HOM05D005507 ORTHO05D007316 4.9e-114 415.2 301 69.8
Cfa017367 Carpinus fangiana HOM05D005507 ORTHO05D007316 6.5e-114 414.8 301 70.4
Thecc.05G038400 Theobroma cacao HOM05D005507 ORTHO05D007316 6.5e-114 414.8 299 70.6
MD12G1143000 Malus domestica HOM05D005507 ORTHO05D007316 8.4e-114 414.5 299 72.2
Gohir.A09G155500 Gossypium hirsutum HOM05D005507 ORTHO05D007316 1.1e-113 414.1 299 70.6
Actinidia11260 Actinidia chinensis HOM05D005507 ORTHO05D007316 1.4e-113 413.7 301 68.8
THA.LOC104816267 Tarenaya hassleriana HOM05D005507 ORTHO05D007316 2.5e-113 412.9 299 69.9
Ah.08g210340 Amaranthus hybridus HOM05D005507 ORTHO05D007316 3.2e-113 412.5 296 71.3
MD04G1129900 Malus domestica HOM05D005507 ORTHO05D007316 3.2e-113 412.5 294 72.1
QL07p048577 Quercus lobata HOM05D005507 ORTHO05D007316 1.2e-112 410.6 313 69.0
Atru.chr8.1984 Acer truncatum HOM05D005507 ORTHO05D007316 1.6e-112 410.2 296 68.6
Gohir.D09G151000 Gossypium hirsutum HOM05D005507 ORTHO05D007316 2.7e-112 409.5 299 70.6
TAR623G0024 Trochodendron aralioides HOM05D005507 ORTHO05D007316 2.7e-112 409.5 301 68.4
Ciclev10011102m.g Citrus clementina HOM05D005507 ORTHO05D007316 3.5e-112 409.1 297 70.0
Potri.006G086200 Populus trichocarpa HOM05D005507 ORTHO05D007316 3.9e-111 405.6 299 70.6
Eucgr.A01270 Eucalyptus grandis HOM05D005507 ORTHO05D007316 5.1e-111 405.2 301 68.4
FvH4_6g13600 Fragaria vesca HOM05D005507 ORTHO05D007316 5.1e-111 405.2 299 69.6
PGR004G0811 Punica granatum HOM05D005507 ORTHO05D007316 5.7e-110 401.7 301 67.4
CANSAT35G1404 Cannabis sativa HOM05D005507 ORTHO05D007316 1.3e-109 400.6 299 67.6
FAN14G4006 Fragaria x ananassa HOM05D005507 ORTHO05D007316 1.3e-109 400.6 299 68.9
TWI53G1275 Tripterygium wilfordii HOM05D005507 ORTHO05D007316 2.2e-109 399.8 300 69.3
Cpa.g.sc188.6 Carica papaya HOM05D005507 ORTHO05D007316 8.2e-109 397.9 299 67.6
ClCG04G008130 Citrullus lanatus HOM05D005507 ORTHO05D007316 1.4e-108 397.1 298 68.1
Lj2A93G83 Lonicera japonica HOM05D005507 ORTHO05D007316 1.4e-108 397.1 301 67.4
TAR633G0577 Trochodendron aralioides HOM05D005507 ORTHO05D007316 1.4e-108 397.1 301 67.1
Carub.0006s0109 Capsella rubella HOM05D005507 ORTHO05D007316 9.0e-108 394.4 299 68.6
FAN09G0180 Fragaria x ananassa HOM05D005507 ORTHO05D007316 1.2e-107 394.0 299 67.6
MELO3C003135.2 Cucumis melo HOM05D005507 ORTHO05D007316 3.4e-107 392.5 298 67.1
Sabra06G0065800 Salix brachista HOM05D005507 ORTHO05D007316 7.7e-107 391.3 312 66.7
CsaV3_4G025060 Cucumis sativus L. HOM05D005507 ORTHO05D007316 1.0e-106 391.0 300 66.7
vmacro20162 Vaccinium macrocarpon HOM05D005507 ORTHO05D007316 1.0e-106 391.0 296 66.9
Sopen09g005610 Solanum pennellii HOM05D005507 ORTHO05D007316 1.3e-106 390.6 297 67.0
Lalb_Chr12g0209571 Lupinus albus HOM05D005507 ORTHO05D007316 1.7e-106 390.2 301 67.4
Rhsim05G0193600 Rhododendron simsii HOM05D005507 ORTHO05D007316 1.7e-106 390.2 301 67.4
Sp6g40200 Schrenkiella parvula HOM05D005507 ORTHO05D007316 1.7e-106 390.2 299 66.9
Sed0014596 Sechium edule HOM05D005507 ORTHO05D007316 1.7e-106 390.2 300 66.3
Aqoxy2G02218 Aquilegia oxysepala HOM05D005507 ORTHO05D007316 2.9e-106 389.4 296 66.6
PGSC0003DMG400008832 Solanum tuberosum HOM05D005507 ORTHO05D007316 2.9e-106 389.4 299 66.9
CAN.G499.3 Capsicum annuum HOM05D005507 ORTHO05D007316 3.8e-106 389.0 299 66.9
Nn2g11133 Nelumbo nucifera HOM05D005507 ORTHO05D007316 5.0e-106 388.7 301 65.8
Lj3g0017176 Lotus japonicus HOM05D005507 ORTHO05D007316 6.5e-106 388.3 292 69.2
MBI14_g36928_MAGBIO Magnolia biondii HOM05D005507 ORTHO05D007316 6.5e-106 388.3 301 64.8
Solyc09g010870.4 Solanum lycopersicum HOM05D005507 ORTHO05D007316 6.5e-106 388.3 297 67.3
C09p74280 Brassica napus HOM05D005507 ORTHO05D007316 8.5e-106 387.9 299 66.6
BolC9t60161H Brassica oleracea HOM05D005507 ORTHO05D007316 8.5e-106 387.9 299 66.6
Thhalv10012718m.g Eutrema salsugineum HOM05D005507 ORTHO05D007316 8.5e-106 387.9 299 67.2
CARHR211120 Cardamine hirsuta HOM05D005507 ORTHO05D007316 1.1e-105 387.5 299 66.6
ATR0559G008 Amborella trichopoda HOM05D005507 ORTHO05D007316 1.9e-105 386.7 300 64.0
AL6G11510 Arabidopsis lyrata HOM05D005507 ORTHO05D007316 1.9e-105 386.7 299 67.2
AT5G02250 Arabidopsis thaliana HOM05D005507 ORTHO05D007316 1.9e-105 386.7 299 66.6
A10p33370 Brassica napus HOM05D005507 ORTHO05D007316 4.2e-105 385.6 299 66.2
Aa31LG1G22500 Aethionema arabicum HOM05D005507 ORTHO05D007316 7.2e-105 384.8 299 64.9
Ca_19991_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 2.7e-104 382.9 283 70.0
HanXRQChr04g0125471 Helianthus annuus HOM05D005507 ORTHO05D007316 2.7e-104 382.9 299 64.9
FAN02G3281 Fragaria x ananassa HOM05D005507 ORTHO05D007316 7.9e-104 381.3 327 62.1
ECA236G2467 Erigeron canadensis HOM05D005507 ORTHO05D007316 2.3e-103 379.8 299 64.2
SalBow3G2672 Salvia bowleyana HOM05D005507 ORTHO05D007316 2.3e-103 379.8 299 64.5
MSTRG.19080 Avicennia marina HOM05D005507 ORTHO05D007316 5.1e-103 378.6 297 66.7
Cc06_g02560 Coffea canephora HOM05D005507 ORTHO05D007316 8.8e-103 377.9 291 66.0
Dinv37165 Davidia involucrata HOM05D005507 ORTHO05D007316 2.5e-102 376.3 297 66.3
BraA10t45368Z Brassica rapa HOM05D005507 ORTHO05D007316 1.3e-101 374.0 299 64.9
Medtr4g021750 Medicago truncatula HOM05D005507 ORTHO05D007316 2.2e-101 373.2 291 67.0
Lsat_1_v5_gn_8_85360 Lactuca sativa HOM05D005507 ORTHO05D007316 6.3e-101 371.7 299 63.5
Glyma.18G153300 Glycine max HOM05D005507 ORTHO05D007316 1.4e-100 370.5 296 64.9
PSO151G0160 Papaver somniferum HOM05D005507 ORTHO05D007316 6.9e-100 368.2 298 64.4
PSO339G2235 Papaver somniferum HOM05D005507 ORTHO05D007316 9.1e-100 367.9 298 63.8
Phvul.010G010050 Phaseolus vulgaris HOM05D005507 ORTHO05D007316 3.4e-99 365.9 296 64.9
TPR.G5632 Trifolium pratense HOM05D005507 ORTHO05D007316 1.0e-98 364.4 290 65.9
arahy.Tifrunner.gnm1.ann1.CQ4D9K Arachis hypogaea HOM05D005507 ORTHO05D007316 1.7e-98 363.6 296 62.5
arahy.Tifrunner.gnm1.ann1.128L9Z Arachis hypogaea HOM05D005507 ORTHO05D007316 3.8e-98 362.5 301 61.8
Migut.J00324 Erythranthe guttata HOM05D005507 ORTHO05D007316 5.0e-98 362.1 294 62.6
SGA_v2.0_scaffold75G24953 Striga asiatica HOM05D005507 ORTHO05D007316 6.5e-98 361.7 294 63.3
VMungo0331G0190 Vigna mungo HOM05D005507 ORTHO05D007316 1.1e-97 360.9 297 64.0
DCAR_028747 Daucus carota HOM05D005507 ORTHO05D007316 4.7e-96 355.5 299 61.9
Oeu024341.2 Olea europaea HOM05D005507 ORTHO05D007316 2.3e-95 353.2 359 54.9
Os01g0841800 Oryza sativa ssp. japonica HOM05D005507 ORTHO05D007316 2.3e-95 353.2 296 62.2
RcHm_v2.0_Chr3g0466451 Rosa chinensis HOM05D005507 ORTHO05D007316 3.0e-95 352.8 299 63.2
Nitab4.5_0011443g0010 Nicotiana tabacum HOM05D005507 ORTHO05D007316 5.7e-94 348.6 301 62.1
CDE04G1833 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 7.4e-94 348.2 301 59.1
Haze_20804 Corylus avellana HOM05D005507 ORTHO05D007316 2.2e-93 346.7 259 69.1
HPP92_018140 Vanilla planifolia HOM05D005507 ORTHO05D007316 2.8e-93 346.3 297 59.6
CDE07G0172 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 3.7e-93 345.9 301 59.5
Nitab4.5_0000705g0210 Nicotiana tabacum HOM05D005507 ORTHO05D007316 4.8e-93 345.5 299 61.5
Peaxi162Scf00165g01015 Petunia axillaris HOM05D005507 ORTHO05D007316 1.3e-90 337.4 299 60.2
Sc07g0007070 Simmondsia chinensis HOM05D005507 ORTHO05D007316 1.7e-90 337.0 254 66.5
Lj3C966G5 Lonicera japonica HOM05D005507 ORTHO05D007316 5.5e-89 332.0 302 60.3
Zm00001eb148300 Zea mays HOM05D005507 ORTHO05D007316 6.1e-88 328.6 301 57.8
Lalb_Chr07g0193881 Lupinus albus HOM05D005507 ORTHO05D007316 3.2e-81 306.2 245 66.1
Prupe.6G256600 Prunus persica HOM05D005507 ORTHO05D007316 5.0e-74 282.3 219 68.5
unitig_578.g15691 Utricularia gibba HOM05D005507 ORTHO05D007316 2.6e-70 270.0 290 51.4
Psat5g035720 Pisum sativum HOM05D005507 ORTHO05D007316 3.1e-68 263.1 220 65.5
EL10As1g23037 Beta vulgaris HOM05D005507 ORTHO05D007316 2.0e-67 260.4 158 76.6
COL.COLO4_14788 Corchorus olitorius HOM05D005507 ORTHO05D007316 4.5e-67 259.2 296 51.7
Psat7g235360 Pisum sativum HOM05D005507 ORTHO05D007316 5.2e-63 245.7 211 63.5
Pp3c14_20610 Physcomitrium patens HOM05D005507 ORTHO05D007316 4.3e-49 199.5 274 40.9
AagrBONN_evm.TU.Sc2ySwM_362.2750 Anthoceros agrestis HOM05D005507 ORTHO05D007316 2.8e-48 196.8 285 38.9
Mapoly0006s0179 Marchantia polymorpha HOM05D005507 ORTHO05D007316 8.1e-48 195.3 275 38.5
Psat6g176160 Pisum sativum HOM05D005507 ORTHO05D007316 6.8e-47 192.2 182 59.3
SMO119G0389 Selaginella moellendorffii HOM05D005507 ORTHO05D007316 3.5e-43 179.9 281 37.4
EL10As1g23036 Beta vulgaris HOM05D005507 ORTHO05D007316 2.3e-42 177.2 139 66.9
CBR_g72631 Chara braunii HOM05D005507 ORTHO05D007316 4.4e-38 162.9 288 34.4
Ca_19986_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 3.0e-34 150.2 108 68.5
PSO170G4202 Papaver somniferum HOM05D005507 ORTHO05D007316 9.6e-33 145.2 176 46.6
SEGI_35618 Sequoiadendron giganteum HOM05D005507 ORTHO05D007316 3.1e-31 140.2 141 55.3
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 2.2e-21 107.5 115 53.0
Cre12.g500650 Chlamydomonas reinhardtii HOM05D005507 ORTHO05D007316 1.3e-16 91.7 305 28.2
Ah.13g075900 Amaranthus hybridus HOM05D005507 ORTHO05D007316 4.0e-15 86.7 62 71.0
Ca_27727_v3 Cicer arietinum L. HOM05D005507 ORTHO05D025048 6.4e-13 79.3 95 49.5
Hma1.2p1_0046F.1_g027310 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 1.9e-12 77.8 57 68.4
Hma1.2p1_0003F.1_g003530 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 2.7e-11 73.9 57 66.7
Atru.chr1.1878 Acer truncatum HOM05D000626 ORTHO05D000824 3.5e-11 73.6 90 46.7
SGA_v2.0_scaffold268G46231 Striga asiatica HOM05D005507 ORTHO05D399677 1.1e-09 68.6 69 52.2
Lalb_Chr07g0193871 Lupinus albus HOM05D005507 ORTHO05D025048 2.1e-08 64.3 53 58.5
Psat0s9259g0040 Pisum sativum HOM05D005507 ORTHO05D007316 1.8e-07 61.2 59 49.2


User provided reference genes

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