Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10323 Selenicereus undatus HOM05D003203 ORTHO05D003526 1.4e-81 306.6 205 100.0
AUR62025015 Chenopodium quinoa HOM05D003203 ORTHO05D003526 2.5e-17 93.2 118 48.3
AUR62006513 Chenopodium quinoa HOM05D003203 ORTHO05D003526 8.0e-16 88.2 131 43.5
Sc15g0001570 Simmondsia chinensis HOM05D003203 ORTHO05D003526 4.9e-13 79.0 147 38.8
TAR633G1300 Trochodendron aralioides HOM05D003203 ORTHO05D003526 1.4e-12 77.4 114 39.5
Manes.11G141000 Manihot esculenta HOM05D003203 ORTHO05D003526 2.4e-12 76.6 113 44.2
Rhsim01G0220300 Rhododendron simsii HOM05D003203 ORTHO05D003526 5.4e-12 75.5 116 39.7
Dinv32789 Davidia involucrata HOM05D003203 ORTHO05D003526 9.2e-12 74.7 88 45.5
TAR636G0568 Trochodendron aralioides HOM05D003203 ORTHO05D003526 3.5e-11 72.8 124 41.9
vmacro14466 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 5.9e-11 72.0 113 36.3
EL10Ac9g22449 Beta vulgaris HOM05D003203 ORTHO05D003526 2.9e-10 69.7 103 42.7
Cpa.g.sc139.65 Carica papaya HOM05D003203 ORTHO05D003526 2.9e-10 69.7 96 41.7
CiPaw.13G106900 Carya illinoinensis HOM05D003203 ORTHO05D003526 5.0e-10 68.9 112 42.0
Ciclev10027702m.g Citrus clementina HOM05D003203 ORTHO05D003526 1.1e-09 67.8 121 35.5
MD03G1112400 Malus domestica HOM05D003203 ORTHO05D003526 2.5e-09 66.6 136 36.8
Sopen11g030070 Solanum pennellii HOM05D003203 ORTHO05D003526 4.3e-09 65.9 117 37.6
CANSAT54G1869 Cannabis sativa HOM05D003203 ORTHO05D003526 5.6e-09 65.5 91 42.9
Migut.D02182 Erythranthe guttata HOM05D003203 ORTHO05D003526 5.6e-09 65.5 145 34.5
Nitab4.5_0001802g0140 Nicotiana tabacum HOM05D003203 ORTHO05D003526 5.6e-09 65.5 118 35.6
Solyc11g072430.3 Solanum lycopersicum HOM05D003203 ORTHO05D003526 5.6e-09 65.5 117 37.6
Peaxi162Scf00389g00943 Petunia axillaris HOM05D003203 ORTHO05D003526 1.2e-08 64.3 97 40.2
MD11G1129800 Malus domestica HOM05D003203 ORTHO05D003526 1.6e-08 63.9 135 36.3
Prupe.6G094700 Prunus persica HOM05D003203 ORTHO05D003526 2.8e-08 63.2 117 37.6
Lj2C1036G7 Lonicera japonica HOM05D003203 ORTHO05D003526 4.7e-08 62.4 78 43.6
Sed0015984 Sechium edule HOM05D003203 ORTHO05D003526 4.7e-08 62.4 122 36.9
Nitab4.5_0002129g0110 Nicotiana tabacum HOM05D003203 ORTHO05D003526 2.3e-07 60.1 118 33.9
PGR102G2647 Punica granatum HOM05D003203 ORTHO05D003526 3.0e-07 59.7 128 32.8
Cc01_g11550 Coffea canephora HOM05D003203 ORTHO05D003526 2.0e-06 57.0 139 32.4
PSO063G4818 Papaver somniferum HOM05D003203 ORTHO05D003526 3.4e-06 56.2 127 35.4
RcHm_v2.0_Chr5g0060751 Rosa chinensis HOM05D003203 ORTHO05D003526 3.4e-06 56.2 124 34.7
CAN.G352.40 Capsicum annuum HOM05D003203 ORTHO05D003526 4.4e-06 55.8 100 36.0
Oeu005910.3 Olea europaea HOM05D003203 ORTHO05D003526 5.7e-06 55.5 74 40.5
CSS0047004 Camellia sinensis var. sinensis HOM05D003203 ORTHO05D003526 9.8e-06 54.7 112 34.8


User provided reference genes

Program Settings