Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06178 Selenicereus undatus HOM05D000104 ORTHO05D006311 1.3e-90 336.3 164 100.0
Hund00332 Selenicereus undatus HOM05D000104 ORTHO05D006311 3.0e-42 175.6 127 67.7
EL10Ac9g21836 Beta vulgaris HOM05D000104 ORTHO05D006311 5.8e-41 171.4 148 58.1
Haze_10067 Corylus avellana HOM05D000104 ORTHO05D006311 4.6e-38 161.8 136 58.8
CSS0031251 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006311 6.0e-38 161.4 143 55.9
CSS0034041 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006311 1.7e-37 159.8 143 55.2
CiPaw.05G006100 Carya illinoinensis HOM05D000104 ORTHO05D006311 6.6e-37 157.9 152 54.6
MBI06_g36644_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D006311 6.6e-37 157.9 130 60.8
Cfa004510 Carpinus fangiana HOM05D000104 ORTHO05D006311 3.3e-36 155.6 129 61.2
DCAR_029033 Daucus carota HOM05D000590 ORTHO05D006311 7.3e-36 154.5 139 56.1
Dinv23617 Davidia involucrata HOM05D000104 ORTHO05D006311 7.3e-36 154.5 143 56.6
Sc18g0004040 Simmondsia chinensis HOM05D000104 ORTHO05D006311 1.2e-35 153.7 126 60.3
RcHm_v2.0_Chr6g0256991 Rosa chinensis HOM05D000104 ORTHO05D006311 3.6e-35 152.1 143 53.8
Actinidia27954 Actinidia chinensis HOM05D000104 ORTHO05D006311 4.7e-35 151.8 129 57.4
AUR62011445 Chenopodium quinoa HOM05D000104 ORTHO05D006311 4.7e-35 151.8 136 59.6
QL11p036019 Quercus lobata HOM05D000104 ORTHO05D006311 6.2e-35 151.4 144 55.6
CsaV3_3G018560 Cucumis sativus L. HOM05D000104 ORTHO05D006311 8.0e-35 151.0 146 52.7
AUR62016616 Chenopodium quinoa HOM05D000104 ORTHO05D006311 1.8e-34 149.8 135 58.5
FvH4_2g06200 Fragaria vesca HOM05D000104 ORTHO05D006311 3.1e-34 149.1 144 53.5
FAN24G2290 Fragaria x ananassa HOM05D000104 ORTHO05D006311 3.1e-34 149.1 144 53.5
Prupe.8G123600 Prunus persica HOM05D000104 ORTHO05D006311 6.8e-34 147.9 130 56.9
MD05G1079700 Malus domestica HOM05D000104 ORTHO05D006311 8.9e-34 147.5 130 57.7
Sed0008150 Sechium edule HOM05D000104 ORTHO05D006311 8.9e-34 147.5 146 52.1
FAN15G0367 Fragaria x ananassa HOM05D000104 ORTHO05D006311 2.6e-33 146.0 144 52.8
Gorai.013G043100 Gossypium raimondii HOM05D000104 ORTHO05D006311 3.4e-33 145.6 130 57.7
Rhsim05G0083600 Rhododendron simsii HOM05D000104 ORTHO05D006311 3.4e-33 145.6 128 56.2
Gohir.D13G038400 Gossypium hirsutum HOM05D000104 ORTHO05D006311 5.8e-33 144.8 130 57.7
PGR042G0253 Punica granatum HOM05D000104 ORTHO05D006311 1.3e-32 143.7 132 55.3
GSVIVG01031756001 Vitis vinifera HOM05D000104 ORTHO05D006311 1.3e-32 143.7 136 57.4
Eucgr.G01447 Eucalyptus grandis HOM05D000104 ORTHO05D006311 1.7e-32 143.3 120 56.7
Nn5g30246 Nelumbo nucifera HOM05D000104 ORTHO05D006311 1.7e-32 143.3 120 58.3
MELO3C019510.2 Cucumis melo HOM05D000104 ORTHO05D006311 2.2e-32 142.9 161 47.2
DCAR_029051 Daucus carota HOM05D000104 ORTHO05D006311 2.2e-32 142.9 115 60.0
Gohir.A13G039700 Gossypium hirsutum HOM05D000104 ORTHO05D006311 2.9e-32 142.5 130 57.7
vmacro19498 Vaccinium macrocarpon HOM05D000104 ORTHO05D006311 2.9e-32 142.5 129 55.8
Thecc.02G099700 Theobroma cacao HOM05D000104 ORTHO05D006311 6.4e-32 141.4 133 54.9
ECA234G1929 Erigeron canadensis HOM05D000104 ORTHO05D006311 1.1e-31 140.6 119 57.1
A05p30430 Brassica napus HOM05D000104 ORTHO05D006311 1.4e-31 140.2 123 61.0
Lj5A209G69 Lonicera japonica HOM05D000104 ORTHO05D006311 1.9e-31 139.8 139 54.0
Medtr5g004720 Medicago truncatula HOM05D000104 ORTHO05D006311 2.4e-31 139.4 124 54.8
BraA05t21881Z Brassica rapa HOM05D000104 ORTHO05D006311 3.2e-31 139.0 122 61.5
Oeu013703.1 Olea europaea HOM05D000104 ORTHO05D006311 3.2e-31 139.0 128 54.7
Aa31LG8G6000 Aethionema arabicum HOM05D000104 ORTHO05D006311 4.1e-31 138.7 129 56.6
BcaC05g28523 Brassica carinata HOM05D000104 ORTHO05D006311 4.1e-31 138.7 123 61.0
C05p46030 Brassica napus HOM05D000104 ORTHO05D006311 4.1e-31 138.7 123 61.0
BolC5t33330H Brassica oleracea HOM05D000104 ORTHO05D006311 4.1e-31 138.7 123 61.0
COL.COLO4_32665 Corchorus olitorius HOM05D000104 ORTHO05D006311 7.0e-31 137.9 130 55.4
Manes.07G082400 Manihot esculenta HOM05D000104 ORTHO05D006311 9.2e-31 137.5 130 53.8
Duzib052G0677 Durio zibethinus HOM05D000104 ORTHO05D006311 1.6e-30 136.7 133 55.6
Thhalv10020013m.g Eutrema salsugineum HOM05D000104 ORTHO05D006311 1.6e-30 136.7 147 51.7
Sabra04G0093400 Salix brachista HOM05D000104 ORTHO05D006311 1.6e-30 136.7 135 55.6
Lj1g0013867 Lotus japonicus HOM05D000104 ORTHO05D006311 2.7e-30 136.0 119 57.1
Glyma.01G244700 Glycine max HOM05D000104 ORTHO05D006311 4.6e-30 135.2 125 54.4
Potri.004G141500 Populus trichocarpa HOM05D000104 ORTHO05D006311 4.6e-30 135.2 133 54.1
THA.LOC104809900 Tarenaya hassleriana HOM05D000104 ORTHO05D006311 4.6e-30 135.2 121 57.0
CARHR094620 Cardamine hirsuta HOM05D000104 ORTHO05D006311 6.0e-30 134.8 136 52.9
ATR0100G059 Amborella trichopoda HOM05D000104 ORTHO05D006311 7.8e-30 134.4 151 47.7
CDE08G1277 Ceratophyllum demersum HOM05D000104 ORTHO05D006311 1.0e-29 134.0 118 52.5
PSO170G2386 Papaver somniferum HOM05D000104 ORTHO05D006311 1.0e-29 134.0 145 50.3
PSO210G6827 Papaver somniferum HOM05D000104 ORTHO05D006311 1.0e-29 134.0 145 50.3
Phvul.002G054300 Phaseolus vulgaris HOM05D000104 ORTHO05D006311 1.0e-29 134.0 125 56.0
TWI31G1026 Tripterygium wilfordii HOM05D000104 ORTHO05D006311 1.0e-29 134.0 128 56.2
Aqoxy5G01249 Aquilegia oxysepala HOM05D000104 ORTHO05D006311 1.3e-29 133.7 137 50.4
AT3G19210 Arabidopsis thaliana HOM05D000104 ORTHO05D006311 1.7e-29 133.3 123 57.7
Carub.0003s1904 Capsella rubella HOM05D000104 ORTHO05D006311 2.3e-29 132.9 124 55.6
Ca_24337_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006311 2.3e-29 132.9 125 52.8
Psat4g228280 Pisum sativum HOM05D000104 ORTHO05D006311 2.3e-29 132.9 124 54.0
Sp3g17280 Schrenkiella parvula HOM05D000104 ORTHO05D006311 2.3e-29 132.9 118 58.5
BcaB06g25977 Brassica carinata HOM05D000104 ORTHO05D006311 3.0e-29 132.5 118 57.6
arahy.Tifrunner.gnm1.ann1.1287G1 Arachis hypogaea HOM05D000104 ORTHO05D006311 3.9e-29 132.1 121 56.2
AL3G32590 Arabidopsis lyrata HOM05D000104 ORTHO05D006311 5.0e-29 131.7 124 56.5
TPR.G21597 Trifolium pratense HOM05D000104 ORTHO05D006311 5.0e-29 131.7 125 52.8
VMungo1215G3211 Vigna mungo HOM05D000104 ORTHO05D006311 1.1e-28 130.6 125 54.4
Cc02_g18720 Coffea canephora HOM05D000104 ORTHO05D006311 1.5e-28 130.2 118 52.5
Lalb_Chr05g0210731 Lupinus albus HOM05D000104 ORTHO05D006311 4.3e-28 128.6 127 54.3
HanXRQChr16g0497611 Helianthus annuus HOM05D000104 ORTHO05D006311 7.3e-28 127.9 124 53.2
HPP92_016725 Vanilla planifolia HOM05D000104 ORTHO05D006311 7.3e-28 127.9 118 52.5
TAR628G1742 Trochodendron aralioides HOM05D000104 ORTHO05D006311 9.5e-28 127.5 112 58.0
Ciclev10027772m.g Citrus clementina HOM05D000104 ORTHO05D006311 1.2e-27 127.1 130 52.3
Solyc04g056410.3 Solanum lycopersicum HOM05D000104 ORTHO05D006311 2.8e-27 125.9 127 48.0
Nitab4.5_0004804g0040 Nicotiana tabacum HOM05D000104 ORTHO05D006311 3.6e-27 125.6 127 47.2
SGA_v2.0_scaffold90G27664 Striga asiatica HOM05D000104 ORTHO05D006311 4.7e-27 125.2 117 52.1
SalBow6G5855 Salvia bowleyana HOM05D000104 ORTHO05D006311 6.2e-27 124.8 127 51.2
Peaxi162Scf00152g00027 Petunia axillaris HOM05D000104 ORTHO05D006311 1.1e-26 124.0 126 46.8
MSTRG.20152 Avicennia marina HOM05D000104 ORTHO05D006311 2.3e-26 122.9 126 49.2
Nitab4.5_0000292g0040 Nicotiana tabacum HOM05D000104 ORTHO05D006311 3.1e-26 122.5 127 46.5
unitig_0.g82 Utricularia gibba HOM05D004246 ORTHO05D006311 4.0e-26 122.1 120 49.2
Migut.B00341 Erythranthe guttata HOM05D000104 ORTHO05D006311 5.2e-26 121.7 126 50.0
Sopen04g025310 Solanum pennellii HOM05D000104 ORTHO05D006311 2.0e-25 119.8 127 46.5
AagrBONN_evm.TU.Sc2ySwM_228.1653 Anthoceros agrestis HOM05D000104 ORTHO05D006311 7.5e-25 117.9 122 45.9
CAN.G46.36 Capsicum annuum HOM05D000104 ORTHO05D006311 9.9e-25 117.5 126 46.0
Lsat_1_v5_gn_5_112800 Lactuca sativa HOM05D000104 ORTHO05D006311 1.3e-24 117.1 144 47.9
SEGI_21756 Sequoiadendron giganteum HOM05D000104 ORTHO05D006311 1.7e-24 116.7 143 42.7
Os02g0762800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D006311 2.2e-24 116.3 120 46.7
ClCG05G010010 Citrullus lanatus HOM05D000104 ORTHO05D006311 3.7e-24 115.5 130 47.7
SHI30983 Sapria himalayana HOM05D000104 ORTHO05D006311 3.7e-24 115.5 129 48.8
QL09p040364 Quercus lobata HOM05D000370 ORTHO05D001335 8.3e-24 114.4 105 54.3
Pp3c16_6690 Physcomitrium patens HOM05D000104 ORTHO05D006311 3.0e-21 105.9 120 44.2
Pp3c5_12730 Physcomitrium patens HOM05D000104 ORTHO05D006311 5.1e-21 105.1 137 40.1
CDE06G0834 Ceratophyllum demersum HOM05D000104 ORTHO05D006311 8.6e-21 104.4 86 53.5
SMO137G0183 Selaginella moellendorffii HOM05D000104 ORTHO05D006311 7.3e-20 101.3 120 43.3
CBR_g70715 Chara braunii HOM05D000104 ORTHO05D006311 3.8e-16 89.0 133 35.3
Atru.chr5.2727 Acer truncatum HOM05D000104 ORTHO05D006311 7.6e-09 64.7 68 50.0
SHI05368 Sapria himalayana HOM05D000104 ORTHO05D006311 5.4e-07 58.5 100 36.0
PRCOL_00002118 Prasinoderma coloniale HOM05D000104 ORTHO05D006311 1.2e-06 57.4 55 41.8


User provided reference genes

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