Gene: SGA_v2.0_scaffold90G27664

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold90G27664
  • Transcript Identifier SGA_v2.0_scaffold90T27664
  • Gene Type Coding gene
  • Location scaffold90 : 290917-297718 : positive

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product DNA repair and recombination protein RAD54
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071480
ISO
PLAZA Integrative Orthologycellular response to gamma radiation AT3G19210
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT3G19210
GO:0071248
ISO
PLAZA Integrative Orthologycellular response to metal ion AT3G19210
GO:0045003
ISO
PLAZA Integrative Orthologydouble-strand break repair via synthesis-dependent strand annealing AT3G19210
GO:0010332
ISO
PLAZA Integrative Orthologyresponse to gamma radiation AT3G19210
GO:0051701
ISO
PLAZA Integrative Orthologybiological process involved in interaction with host AT3G19210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G19210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000330 SNF2, N-terminal
IPR038718 SNF2-like, N-terminal domain superfamily
IPR001650 Helicase, C-terminal
Mapman id Description
12.4.8.1.1 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad54-like group.chromatin remodeling factor (RAD54)