Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03783 Selenicereus undatus HOM05D005263 ORTHO05D006891 1.2e-30 136.0 72 100.0
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 2.5e-20 101.7 60 86.7
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 3.2e-20 101.3 56 91.1
Hund04127 Selenicereus undatus HOM05D005263 ORTHO05D006891 3.2e-20 101.3 56 91.1
Hund08767 Selenicereus undatus HOM05D005263 ORTHO05D006891 3.2e-20 101.3 64 84.4
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 4.2e-20 100.9 60 85.0
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 5.5e-20 100.5 60 85.0
Gohir.A09G000037 Gossypium hirsutum HOM05D005263 ORTHO05D006891 5.5e-20 100.5 60 86.7
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 5.5e-20 100.5 60 86.7
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 5.5e-20 100.5 60 86.7
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 5.5e-20 100.5 60 86.7
Hund08319 Selenicereus undatus HOM05D001382 ORTHO05D018141 5.5e-20 100.5 64 84.4
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 5.5e-20 100.5 60 86.7
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 7.1e-20 100.1 62 82.3
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 7.1e-20 100.1 60 86.7
SalBow4G2620 Salvia bowleyana HOM05D005263 ORTHO05D006891 9.3e-20 99.8 62 80.6
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 1.2e-19 99.4 60 83.3
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 1.2e-19 99.4 60 83.3
CiPaw.03G000200 Carya illinoinensis HOM05D005263 ORTHO05D006891 1.6e-19 99.0 56 87.5
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 1.6e-19 99.0 60 83.3
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 1.6e-19 99.0 56 87.5
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.6e-19 99.0 56 87.5
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.6e-19 99.0 56 87.5
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.6e-19 99.0 56 87.5
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 1.6e-19 99.0 56 87.5
Hma1.2p1_0265F.1_g106770 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 1.6e-19 99.0 56 87.5
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 1.6e-19 99.0 60 83.3
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 1.6e-19 99.0 62 80.6
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 1.6e-19 99.0 56 87.5
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 1.6e-19 99.0 60 83.3
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 1.6e-19 99.0 62 80.6
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 2.1e-19 98.6 56 87.5
vmacro22255 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 2.1e-19 98.6 56 87.5
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 2.7e-19 98.2 56 89.3
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 2.7e-19 98.2 62 80.6
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 2.7e-19 98.2 55 89.1
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
BcaNung05596 Brassica carinata HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 87.5
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
Manes.11G073900 Manihot esculenta HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 87.5
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 87.5
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 3.5e-19 97.8 60 81.7
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 3.5e-19 97.8 56 85.7
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 4.6e-19 97.4 56 85.7
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 4.6e-19 97.4 56 85.7
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 4.6e-19 97.4 56 85.7
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 4.6e-19 97.4 62 79.0
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 6.1e-19 97.1 60 81.7
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 6.1e-19 97.1 56 87.5
CDE02G2322 Ceratophyllum demersum HOM05D005263 ORTHO05D006891 6.1e-19 97.1 60 81.7
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 6.1e-19 97.1 56 85.7
Nitab4.5_0000519g0290 Nicotiana tabacum HOM05D005263 ORTHO05D006891 6.1e-19 97.1 56 83.9
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 6.1e-19 97.1 56 85.7
Sc07g0003930 Simmondsia chinensis HOM05D005263 ORTHO05D006891 6.1e-19 97.1 57 86.0
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 6.1e-19 97.1 56 87.5
Actinidia05377 Actinidia chinensis HOM05D005263 ORTHO05D006891 7.9e-19 96.7 56 87.5
Cc08_g07670 Coffea canephora HOM05D005263 ORTHO05D006891 7.9e-19 96.7 56 85.7
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 7.9e-19 96.7 56 83.9
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 7.9e-19 96.7 56 83.9
Hund17870 Selenicereus undatus HOM05D001382 ORTHO05D001266 7.9e-19 96.7 64 81.2
SGA_v2.0_scaffold274G46524 Striga asiatica HOM05D005263 ORTHO05D006891 7.9e-19 96.7 56 83.9
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 1.0e-18 96.3 60 83.3
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 1.0e-18 96.3 55 89.1
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 1.0e-18 96.3 56 83.9
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 1.0e-18 96.3 56 83.9
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 1.0e-18 96.3 56 83.9
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 1.0e-18 96.3 60 81.7
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 1.3e-18 95.9 56 85.7
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 1.3e-18 95.9 55 85.5
GSVIVG01032955001 Vitis vinifera HOM05D005263 ORTHO05D006891 1.3e-18 95.9 56 85.7
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 1.8e-18 95.5 56 83.9
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 1.8e-18 95.5 56 83.9
Hund12662 Selenicereus undatus HOM05D005263 ORTHO05D006891 1.8e-18 95.5 57 86.0
Cc07_g01440 Coffea canephora HOM05D005263 ORTHO05D006891 2.3e-18 95.1 56 83.9
Rhsim10G0000700 Rhododendron simsii HOM05D005263 ORTHO05D006891 2.3e-18 95.1 56 82.1
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 3.0e-18 94.7 56 83.9
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 3.0e-18 94.7 56 82.1
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 3.0e-18 94.7 60 80.0
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 3.0e-18 94.7 56 83.9
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 3.9e-18 94.4 56 85.7
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 3.9e-18 94.4 56 85.7
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 8.7e-18 93.2 63 74.6
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 8.7e-18 93.2 56 82.1
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 1.1e-17 92.8 57 80.7
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 2.5e-17 91.7 64 76.6
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 3.3e-17 91.3 57 78.9
BcaC01g05768 Brassica carinata HOM05D005263 ORTHO05D006891 4.3e-17 90.9 56 82.1
unitig_52.g17690 Utricularia gibba HOM05D005263 ORTHO05D006891 4.3e-17 90.9 56 80.4
Zm00001eb113530 Zea mays HOM05D005263 ORTHO05D006891 1.3e-16 89.4 60 73.3
SEGI_39668 Sequoiadendron giganteum HOM05D005263 ORTHO05D006891 1.2e-14 82.8 56 71.4
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 1.4e-12 75.9 55 63.6
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 1.9e-12 75.5 55 67.3
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 1.9e-12 75.5 55 60.0
CBR_g56393 Chara braunii HOM05D000409 ORTHO05D000184 5.5e-12 73.9 55 61.8
Hund23148 Selenicereus undatus HOM05D005263 ORTHO05D006891 5.5e-12 73.9 46 87.0
MCO01G164 Micromonas commoda HOM05D005263 ORTHO05D006891 1.4e-10 69.3 54 59.3
Hund01555 Selenicereus undatus HOM05D002432 ORTHO05D000695 1.4e-10 69.3 43 83.7
Hund15255 Selenicereus undatus HOM05D001382 ORTHO05D018141 2.3e-10 68.6 40 90.0
Hund24764 Selenicereus undatus HOM05D001382 ORTHO05D001266 2.3e-10 68.6 40 90.0
Pp3c2_18110 Physcomitrium patens HOM05D005263 ORTHO05D006891 3.9e-10 67.8 53 64.2
Hund25922 Selenicereus undatus HOM05D005263 ORTHO05D006891 2.0e-09 65.5 37 89.2
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 3.3e-09 64.7 56 66.1
Gohir.D04G157300 Gossypium hirsutum HOM05D005263 ORTHO05D013538 1.8e-07 58.9 32 90.6
Gorai.012G144700 Gossypium raimondii HOM05D005263 ORTHO05D013538 1.8e-07 58.9 32 90.6


User provided reference genes

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