Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02745 Selenicereus undatus HOM05D001734 ORTHO05D003483 7.4e-203 710.3 353 100.0
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 9.8e-155 550.4 357 75.4
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 2.3e-140 502.7 357 68.6
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 4.4e-139 498.4 354 69.5
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 2.9e-138 495.7 357 68.9
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 5.4e-137 491.5 354 68.1
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 1.3e-135 486.9 354 67.5
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 8.6e-135 484.2 354 69.2
vmacro19389 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 7.3e-134 481.1 357 66.9
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 3.6e-133 478.8 354 67.8
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 6.2e-133 478.0 357 67.2
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 3.1e-132 475.7 355 66.8
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 6.8e-132 474.6 364 65.9
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 8.9e-132 474.2 354 66.1
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 1.5e-131 473.4 354 66.7
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.6e-131 472.6 356 65.7
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 3.4e-131 472.2 359 66.3
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 5.8e-131 471.5 356 64.9
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 4.9e-130 468.4 354 64.4
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 6.4e-130 468.0 356 63.8
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.1e-129 467.2 352 65.1
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.1e-129 467.2 357 64.4
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 1.1e-129 467.2 356 64.9
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 4.1e-129 465.3 357 64.1
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 9.2e-129 464.2 357 62.7
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.0e-127 460.7 354 64.7
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.0e-127 460.7 357 63.0
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.7e-127 459.9 355 64.2
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.1e-126 457.2 354 61.6
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 2.5e-126 456.1 357 63.3
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 3.3e-126 455.7 354 61.9
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 3.3e-126 455.7 354 61.9
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 4.3e-126 455.3 354 61.6
Ca_16175_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 9.6e-126 454.1 362 62.2
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 2.1e-125 453.0 354 62.4
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 4.7e-125 451.8 354 63.6
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 6.2e-125 451.4 354 63.3
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 8.1e-125 451.1 352 65.1
PSO732G0258 Papaver somniferum HOM05D001734 ORTHO05D003483 1.1e-124 450.7 357 62.5
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 2.4e-124 449.5 357 62.5
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 6.9e-124 448.0 357 61.9
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 4.4e-123 445.3 353 61.5
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 4.4e-123 445.3 354 61.9
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 7.6e-123 444.5 359 61.8
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 9.9e-123 444.1 354 63.0
Lj9A448T39 Lonicera japonica HOM05D001734 ORTHO05D003483 1.3e-122 443.7 385 60.5
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 1.7e-122 443.4 352 59.9
Cpa.g.sc1166.1 Carica papaya HOM05D001734 ORTHO05D003483 6.4e-122 441.4 370 61.9
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 4.2e-121 438.7 357 62.7
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 7.1e-121 438.0 355 60.8
VMungo1309G1926 Vigna mungo HOM05D000002 ORTHO05D000001 2.1e-120 436.4 357 60.8
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 3.5e-120 435.6 351 61.0
Lalb_Chr08g0236521 Lupinus albus HOM05D001734 ORTHO05D003483 8.7e-119 431.0 357 61.9
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 4.3e-118 428.7 354 61.0
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 1.6e-117 426.8 356 60.7
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.1e-116 424.1 354 58.8
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.1e-113 414.1 356 58.4
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.1e-113 414.1 356 58.4
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.4e-113 411.8 356 57.9
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 7.1e-113 411.4 366 56.3
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 2.1e-112 409.8 354 57.3
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 2.1e-112 409.8 354 57.3
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 2.1e-112 409.8 354 56.8
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 8.7e-111 404.4 356 56.2
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.9e-110 403.3 349 56.7
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 4.5e-107 392.1 336 58.6
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 9.9e-107 391.0 357 53.8
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 4.9e-106 388.7 369 54.5
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.1e-105 387.5 305 61.6
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.8e-103 380.2 337 56.4
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 5.1e-103 378.6 333 56.2
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.1e-102 377.5 333 55.9
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.2e-98 363.2 362 53.0
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 2.7e-96 356.3 354 54.2
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 3.0e-95 352.8 352 49.4
CDE07G0247 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 4.3e-94 349.0 283 58.3
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 6.3e-93 345.1 283 60.4
Migut.C00312 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.2e-90 336.7 331 53.8
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 2.5e-89 333.2 247 64.4
ATR0730G017 Amborella trichopoda HOM05D001734 ORTHO05D003483 5.5e-89 332.0 353 51.6
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 4.6e-88 328.9 354 44.6
Nitab4.5_0000984g0080 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.3e-87 327.4 321 54.2
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 4.3e-86 322.4 240 67.1
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 6.3e-85 318.5 279 57.0
TPR.G6095 Trifolium pratense HOM05D001734 ORTHO05D003483 9.4e-81 304.7 268 57.5
Rhsim06G0125200 Rhododendron simsii HOM05D001734 ORTHO05D003483 9.7e-70 268.1 252 56.3
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 7.0e-68 261.9 358 40.8
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 2.9e-66 256.5 210 62.9
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 8.2e-61 238.4 357 37.8
COL.COLO4_30229 Corchorus olitorius HOM05D001734 ORTHO05D003483 2.5e-57 226.9 220 55.5
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 5.5e-57 225.7 354 37.6
SHI17017 Sapria himalayana HOM05D001734 ORTHO05D003483 3.5e-51 206.5 198 55.6
SEGI_17988 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 1.5e-49 201.1 220 50.0
Rhsim02G0151200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.9e-49 200.7 237 48.1
arahy.Tifrunner.gnm1.ann1.1I6Y5K Arachis hypogaea HOM05D001734 ORTHO05D003483 2.3e-34 150.6 114 61.4
Rhsim06G0125100 Rhododendron simsii HOM05D001734 ORTHO05D003483 4.4e-30 136.3 113 61.1
arahy.Tifrunner.gnm1.ann1.BK2P93 Arachis hypogaea HOM05D001734 ORTHO05D003483 2.2e-29 134.0 194 42.8
arahy.Tifrunner.gnm1.ann1.EMU6Q2 Arachis hypogaea HOM05D001734 ORTHO05D003483 9.2e-28 128.6 116 56.9
SHI17018 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-27 128.3 237 36.3
CBR_g286 Chara braunii HOM05D000004 ORTHO05D000002 2.0e-27 127.5 159 43.4
TPR.G5903 Trifolium pratense HOM05D001734 ORTHO05D003483 1.0e-26 125.2 93 64.5
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 1.3e-26 124.8 124 55.6
MD14G1180200 Malus domestica HOM05D001734 ORTHO05D003483 4.4e-22 109.8 94 57.4
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.4e-20 104.8 356 28.9
SEGI_06250 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 4.7e-16 89.7 83 47.0
TPR.G21158 Trifolium pratense HOM05D001734 ORTHO05D003483 2.4e-15 87.4 73 53.4
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 6.9e-07 59.3 65 49.2


User provided reference genes

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