Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0181F.1_g079940 Hydrangea macrophylla HOM05D000104 ORTHO05D028418 4.1e-104 381.3 184 100.0
Dinv09066 Davidia involucrata HOM05D000104 ORTHO05D006385 4.3e-29 132.1 126 61.1
QL11p013542 Quercus lobata HOM05D000104 ORTHO05D006385 9.7e-29 131.0 128 57.0
GSVIVG01012117001 Vitis vinifera HOM05D000104 ORTHO05D006385 2.2e-28 129.8 126 58.7
CANSAT35G1593 Cannabis sativa HOM05D000104 ORTHO05D006385 2.8e-28 129.4 126 59.5
Cfa000689 Carpinus fangiana HOM05D000104 ORTHO05D006385 1.1e-27 127.5 126 57.1
Haze_06104 Corylus avellana HOM05D000104 ORTHO05D006385 9.0e-27 124.4 126 56.3
CSS0049241 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006385 1.5e-26 123.6 129 56.6
Atru.chr10.483 Acer truncatum HOM05D000104 ORTHO05D006385 2.6e-26 122.9 126 57.9
Cpa.g.sc30.142 Carica papaya HOM05D000104 ORTHO05D006385 2.6e-26 122.9 126 59.5
CsaV3_6G052880 Cucumis sativus L. HOM05D000104 ORTHO05D006385 2.6e-26 122.9 126 55.6
CiPaw.09G075000 Carya illinoinensis HOM05D000104 ORTHO05D006385 4.5e-26 122.1 126 55.6
ClCG01G025670 Citrullus lanatus HOM05D000104 ORTHO05D006385 4.5e-26 122.1 126 55.6
Potri.003G110100 Populus trichocarpa HOM05D000104 ORTHO05D006385 4.5e-26 122.1 125 53.6
Sabra03G0076300 Salix brachista HOM05D000104 ORTHO05D006385 5.9e-26 121.7 125 53.6
COL.COLO4_17640 Corchorus olitorius HOM05D000104 ORTHO05D006385 1.3e-25 120.6 126 55.6
Potri.001G123400 Populus trichocarpa HOM05D000104 ORTHO05D006385 1.7e-25 120.2 125 54.4
Manes.16G060500 Manihot esculenta HOM05D000104 ORTHO05D006385 2.9e-25 119.4 126 54.0
Duzib132G0144 Durio zibethinus HOM05D000104 ORTHO05D006385 5.0e-25 118.6 126 54.8
Gorai.008G049300 Gossypium raimondii HOM05D000104 ORTHO05D006385 5.0e-25 118.6 126 55.6
Nn7g38207 Nelumbo nucifera HOM05D000104 ORTHO05D006385 5.0e-25 118.6 125 53.6
TWI15G0050 Tripterygium wilfordii HOM05D000104 ORTHO05D006385 5.0e-25 118.6 126 55.6
MELO3C007018.2 Cucumis melo HOM05D000104 ORTHO05D006385 8.5e-25 117.9 123 54.5
FvH4_3g12610 Fragaria vesca HOM05D000104 ORTHO05D006385 8.5e-25 117.9 126 54.8
FAN16G3696 Fragaria x ananassa HOM05D000104 ORTHO05D006385 8.5e-25 117.9 126 54.8
FAN21G0261 Fragaria x ananassa HOM05D000104 ORTHO05D006385 8.5e-25 117.9 126 54.8
FAN25G1943 Fragaria x ananassa HOM05D000104 ORTHO05D006385 8.5e-25 117.9 126 54.8
Glyma.05G131500 Glycine max HOM05D000104 ORTHO05D006385 8.5e-25 117.9 126 54.8
Phvul.002G191300 Phaseolus vulgaris HOM05D000104 ORTHO05D006385 1.4e-24 117.1 126 54.0
TAR626G0969 Trochodendron aralioides HOM05D000104 ORTHO05D006385 1.9e-24 116.7 126 55.6
Glyma.08G086100 Glycine max HOM05D000104 ORTHO05D006385 2.5e-24 116.3 126 54.8
RcHm_v2.0_Chr5g0020581 Rosa chinensis HOM05D000104 ORTHO05D006385 2.5e-24 116.3 126 54.0
CiPaw.10G063100 Carya illinoinensis HOM05D000104 ORTHO05D006385 3.2e-24 115.9 126 52.4
Sabra01G0095100 Salix brachista HOM05D000104 ORTHO05D006385 3.2e-24 115.9 123 52.8
Cc09_g05810 Coffea canephora HOM05D000104 ORTHO05D006385 4.2e-24 115.5 123 55.3
Gohir.A12G048001 Gossypium hirsutum HOM05D000104 ORTHO05D006385 4.2e-24 115.5 126 54.8
Solyc02g068560.3 Solanum lycopersicum HOM05D000104 ORTHO05D006385 4.2e-24 115.5 126 54.8
Sopen02g017710 Solanum pennellii HOM05D000104 ORTHO05D006385 4.2e-24 115.5 126 54.8
MBI18_g05699_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D006385 5.5e-24 115.2 126 54.0
Duzib248G0971 Durio zibethinus HOM05D000104 ORTHO05D006385 9.4e-24 114.4 126 53.2
Lj2C344G7 Lonicera japonica HOM05D000104 ORTHO05D006385 9.4e-24 114.4 126 56.3
Sed0021696 Sechium edule HOM05D000104 ORTHO05D006385 9.4e-24 114.4 126 54.8
MSTRG.16362 Avicennia marina HOM05D000104 ORTHO05D006385 1.2e-23 114.0 126 54.8
TWI63G1682 Tripterygium wilfordii HOM05D000104 ORTHO05D006385 1.6e-23 113.6 126 53.2
Ca_18254_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006385 2.7e-23 112.8 126 54.0
VMungo0251G0392 Vigna mungo HOM05D000104 ORTHO05D006385 2.7e-23 112.8 126 52.4
Medtr4g096930 Medicago truncatula HOM05D000104 ORTHO05D006385 4.6e-23 112.1 126 52.4
Duzib052G0523 Durio zibethinus HOM05D000104 ORTHO05D006385 6.1e-23 111.7 125 52.8
Peaxi162Scf00199g00049 Petunia axillaris HOM05D000104 ORTHO05D006385 7.9e-23 111.3 126 53.2
Prupe.4G114900 Prunus persica HOM05D000104 ORTHO05D006385 7.9e-23 111.3 126 52.4
TPR.G2937 Trifolium pratense HOM05D000104 ORTHO05D006385 1.0e-22 110.9 121 54.5
Lsat_1_v5_gn_4_139440 Lactuca sativa HOM05D000104 ORTHO05D006385 1.4e-22 110.5 124 55.6
HanXRQChr14g0440251 Helianthus annuus HOM05D000104 ORTHO05D006385 1.8e-22 110.2 124 53.2
THA.LOC104812917 Tarenaya hassleriana HOM05D000104 ORTHO05D006385 2.3e-22 109.8 126 52.4
arahy.Tifrunner.gnm1.ann1.AWTX9V Arachis hypogaea HOM05D000104 ORTHO05D006385 3.9e-22 109.0 124 55.6
arahy.Tifrunner.gnm1.ann1.VH4LBD Arachis hypogaea HOM05D000104 ORTHO05D006385 3.9e-22 109.0 124 55.6
Sc17g0004230 Simmondsia chinensis HOM05D000104 ORTHO05D006385 5.1e-22 108.6 126 53.2
Psat7g089160 Pisum sativum HOM05D000104 ORTHO05D006385 6.7e-22 108.2 121 52.9
vmacro11005 Vaccinium macrocarpon HOM05D000104 ORTHO05D006385 6.7e-22 108.2 127 51.2
MD10G1229800 Malus domestica HOM05D000104 ORTHO05D006385 8.8e-22 107.8 126 52.4
Nitab4.5_0006786g0010 Nicotiana tabacum HOM05D000104 ORTHO05D006385 8.8e-22 107.8 123 55.3
Actinidia33653 Actinidia chinensis HOM05D000104 ORTHO05D006385 1.5e-21 107.1 126 54.0
Lj4g0022521 Lotus japonicus HOM05D000104 ORTHO05D006385 2.5e-21 106.3 125 48.8
HanXRQChr12g0381521 Helianthus annuus HOM05D000104 ORTHO05D006385 3.3e-21 105.9 124 52.4
THA.LOC104806217 Tarenaya hassleriana HOM05D000104 ORTHO05D006385 3.3e-21 105.9 126 50.8
CAN.G149.4 Capsicum annuum HOM05D000104 ORTHO05D006385 4.3e-21 105.5 124 53.2
AUR62042116 Chenopodium quinoa HOM05D000104 ORTHO05D006385 4.3e-21 105.5 126 53.2
Oeu056048.2 Olea europaea HOM05D000104 ORTHO05D006385 5.7e-21 105.1 126 51.6
Rhsim02G0169000 Rhododendron simsii HOM05D000104 ORTHO05D006385 5.7e-21 105.1 158 44.3
Aqoxy1G01408 Aquilegia oxysepala HOM05D000104 ORTHO05D006385 7.4e-21 104.8 125 49.6
Lsat_1_v5_gn_3_107981 Lactuca sativa HOM05D000104 ORTHO05D006385 7.4e-21 104.8 124 51.6
Eucgr.E04303 Eucalyptus grandis HOM05D000104 ORTHO05D006385 9.7e-21 104.4 122 52.5
ECA238G2949 Erigeron canadensis HOM05D000104 ORTHO05D006385 1.3e-20 104.0 124 51.6
Oeu058937.1 Olea europaea HOM05D000104 ORTHO05D006385 1.3e-20 104.0 125 51.2
AL8G14720 Arabidopsis lyrata HOM05D000104 ORTHO05D006385 2.2e-20 103.2 126 50.0
ECA246G5074 Erigeron canadensis HOM05D000104 ORTHO05D006385 2.8e-20 102.8 120 52.5
CARHR178070 Cardamine hirsuta HOM05D000104 ORTHO05D006385 3.7e-20 102.4 121 50.4
Carub.0008s0345 Capsella rubella HOM05D000104 ORTHO05D006385 4.8e-20 102.1 126 49.2
Ciclev10014010m.g Citrus clementina HOM05D000104 ORTHO05D006385 4.8e-20 102.1 126 50.0
DCAR_007783 Daucus carota HOM05D000104 ORTHO05D006385 4.8e-20 102.1 122 51.6
MD05G1249300 Malus domestica HOM05D000104 ORTHO05D006385 4.8e-20 102.1 125 48.0
PGR042G0503 Punica granatum HOM05D000104 ORTHO05D006385 4.8e-20 102.1 126 51.6
Lalb_Chr12g0209031 Lupinus albus HOM05D000104 ORTHO05D006385 6.3e-20 101.7 126 49.2
Actinidia22418 Actinidia chinensis HOM05D000104 ORTHO05D006385 8.2e-20 101.3 132 49.2
AT5G44800 Arabidopsis thaliana HOM05D000104 ORTHO05D006385 8.2e-20 101.3 119 50.4
AUR62040328 Chenopodium quinoa HOM05D000104 ORTHO05D006385 8.2e-20 101.3 126 51.6
Lalb_Chr07g0188451 Lupinus albus HOM05D000104 ORTHO05D006385 8.2e-20 101.3 126 48.4
Gohir.D12G046800 Gossypium hirsutum HOM05D000104 ORTHO05D006385 1.8e-19 100.1 110 55.5
Sp2g09650 Schrenkiella parvula HOM05D000104 ORTHO05D006385 2.4e-19 99.8 126 47.6
Aa31LG9G8370 Aethionema arabicum HOM05D000104 ORTHO05D006385 4.1e-19 99.0 126 48.4
Thhalv10000738m.g Eutrema salsugineum HOM05D000104 ORTHO05D006385 4.1e-19 99.0 126 47.6
THA.LOC104811657 Tarenaya hassleriana HOM05D000104 ORTHO05D006385 5.3e-19 98.6 126 49.2
unitig_748.g8075 Utricularia gibba HOM05D000104 ORTHO05D006385 9.1e-19 97.8 122 52.5
Migut.E00892 Erythranthe guttata HOM05D000104 ORTHO05D006385 1.2e-18 97.4 127 49.6
Migut.E01638 Erythranthe guttata HOM05D000104 ORTHO05D006385 1.2e-18 97.4 127 49.6
PSO541G6099 Papaver somniferum HOM05D000104 ORTHO05D006385 2.6e-18 96.3 126 46.0
PSO675G2846 Papaver somniferum HOM05D000104 ORTHO05D006385 2.6e-18 96.3 126 46.0
EL10Ac7g17247 Beta vulgaris HOM05D000104 ORTHO05D006385 3.4e-18 95.9 126 50.0
BcaB07g30923 Brassica carinata HOM05D000104 ORTHO05D006385 4.5e-18 95.5 126 45.2
BcaC04g21814 Brassica carinata HOM05D000104 ORTHO05D006385 4.5e-18 95.5 126 44.4
A09p21350 Brassica napus HOM05D000104 ORTHO05D006385 4.5e-18 95.5 126 44.4
C09p27190 Brassica napus HOM05D000104 ORTHO05D006385 4.5e-18 95.5 126 44.4
BolC9t55600H Brassica oleracea HOM05D000104 ORTHO05D006385 4.5e-18 95.5 126 44.4
BraA09t37740Z Brassica rapa HOM05D000104 ORTHO05D006385 4.5e-18 95.5 126 44.4
BcaB01g05351 Brassica carinata HOM05D000104 ORTHO05D006385 7.7e-18 94.7 119 47.1
BcaC09g48065 Brassica carinata HOM05D000104 ORTHO05D006385 1.3e-17 94.0 126 45.2
DCAR_003772 Daucus carota HOM05D000104 ORTHO05D006385 1.3e-17 94.0 127 48.0
CDE11G0114 Ceratophyllum demersum HOM05D000104 ORTHO05D006385 2.5e-16 89.7 126 46.8
SGA_v2.0_scaffold341G49372 Striga asiatica HOM05D000104 ORTHO05D006385 2.5e-16 89.7 128 46.9
CDE05G3360 Ceratophyllum demersum HOM05D000104 ORTHO05D006385 5.5e-16 88.6 126 46.8
Os07g0497100 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D006385 5.5e-16 88.6 126 44.4
ATR0697G167 Amborella trichopoda HOM05D000104 ORTHO05D006385 9.4e-16 87.8 127 46.5
Ah.08g212330 Amaranthus hybridus HOM05D000104 ORTHO05D006385 2.7e-15 86.3 126 46.0
Thecc.02G006500 Theobroma cacao HOM05D000104 ORTHO05D006385 2.7e-15 86.3 125 44.0
HPP92_015621 Vanilla planifolia HOM05D000104 ORTHO05D006385 1.1e-11 74.3 130 40.0
SEGI_40217 Sequoiadendron giganteum HOM05D000104 ORTHO05D006385 2.9e-09 66.2 134 37.3
RhsimUnG0143700 Rhododendron simsii HOM05D000104 ORTHO05D028418 1.5e-08 63.9 46 71.7
CSS0030183 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D028418 1.4e-06 57.4 42 69.0
SMO352G0050 Selaginella moellendorffii HOM05D000104 ORTHO05D006385 8.8e-06 54.7 81 39.5


User provided reference genes

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