Gene: Solyc02g068560.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g068560.3
  • Transcript Identifier Solyc02g068560.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 36527699-36542581 : negative

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g068560.3.1
  • uniprot A0A3Q7FMC5
  • gene_id Solyc02g068560

Descriptions

  • Description Protein CHROMATIN REMODELING 4 (AHRD V3.3 *** A0A2G2XDA8_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042735
ISO
PLAZA Integrative Orthologyprotein body AT5G44800
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G44800
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G44800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016197 Chromo-like domain superfamily
IPR001965 Zinc finger, PHD-type
IPR001650 Helicase, C-terminal
IPR019787 Zinc finger, PHD-finger
IPR038718 SNF2-like, N-terminal domain superfamily
IPR009463 Domain of unknown function DUF1087
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR009057 Homeobox-like domain superfamily
IPR000330 SNF2, N-terminal
IPR023780 Chromo domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR000953 Chromo/chromo shadow domain
Mapman id Description
12.4.7.2 Chromatin organisation.nucleosome remodeling.CHD chromatin remodeling activities.CHD3-type chromatin remodeling factor (PKL/PKR)