Gene: THA.LOC104811657
General Information
Structural Information
- Species Tarenaya hassleriana
- Gene Identifier THA.LOC104811657
- Transcript Identifier THA.XM_019201777.1
- Gene Type Coding gene
- Location NW_010960187.1 : 4839623-4848450 : positive
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D006385
- #Genes/#Species 143/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- GeneID 104811657
- RefSeq XM_019201777.1
- RefSeq XP_019057322.1
- tid rna1547
- id gene1020
Descriptions
- Description protein CHROMATIN REMODELING 4-like isoform X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G44800 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042735 | ISO | PLAZA Integrative Orthology | protein body | AT5G44800 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G44800 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G44800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001965 | Zinc finger, PHD-type |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR000953 | Chromo/chromo shadow domain |
| IPR001650 | Helicase, C-terminal |
| IPR000330 | SNF2, N-terminal |
| IPR009463 | Domain of unknown function DUF1087 |
| IPR023780 | Chromo domain |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR019787 | Zinc finger, PHD-finger |
| IPR016197 | Chromo-like domain superfamily |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR009057 | Homeobox-like domain superfamily |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 12.4.7.2 | Chromatin organisation.nucleosome remodeling.CHD chromatin remodeling activities.CHD3-type chromatin remodeling factor (PKL/PKR) |