Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26994 Corylus avellana HOM05D003658 ORTHO05D004457 1.4e-309 1065.4 545 100.0
PSO782G2702 Papaver somniferum HOM05D003658 ORTHO05D004457 1.0e-171 607.4 535 60.0
Migut.N03234 Erythranthe guttata HOM05D003658 ORTHO05D004457 9.8e-170 600.9 535 59.6
MSTRG.22380 Avicennia marina HOM05D003658 ORTHO05D004457 8.3e-169 597.8 527 59.6
PGR031G3879 Punica granatum HOM05D003658 ORTHO05D004457 1.1e-168 597.4 537 58.3
PGSC0003DMG400007504 Solanum tuberosum HOM05D003658 ORTHO05D004457 1.1e-168 597.4 535 59.1
Hund30148 Selenicereus undatus HOM05D003658 ORTHO05D004457 1.8e-168 596.7 527 59.6
Hund30149 Selenicereus undatus HOM05D003658 ORTHO05D004457 1.8e-168 596.7 527 59.6
SGA_v2.0_scaffold19G08651 Striga asiatica HOM05D003658 ORTHO05D004457 1.8e-168 596.7 527 59.6
CiPaw.13G106400 Carya illinoinensis HOM05D003658 ORTHO05D004457 2.4e-168 596.3 528 59.1
Sp1g25780 Schrenkiella parvula HOM05D003658 ORTHO05D004457 2.4e-168 596.3 527 59.6
Thhalv10006598m.g Eutrema salsugineum HOM05D003658 ORTHO05D004457 3.1e-168 595.9 527 59.6
Solyc06g075340.4 Solanum lycopersicum HOM05D003658 ORTHO05D004457 3.1e-168 595.9 535 58.7
Cc10_g16400 Coffea canephora HOM05D003658 ORTHO05D004457 4.1e-168 595.5 527 59.8
THA.LOC104826356 Tarenaya hassleriana HOM05D003658 ORTHO05D004457 4.1e-168 595.5 531 59.3
Nn2g13001 Nelumbo nucifera HOM05D003658 ORTHO05D004457 5.4e-168 595.1 535 58.5
BcaC05g27003 Brassica carinata HOM05D003658 ORTHO05D004457 7.0e-168 594.7 527 59.4
A09p36600 Brassica napus HOM05D003658 ORTHO05D004457 7.0e-168 594.7 527 59.4
C05p28660 Brassica napus HOM05D003658 ORTHO05D004457 7.0e-168 594.7 527 59.4
BolC5t31587H Brassica oleracea HOM05D003658 ORTHO05D004457 7.0e-168 594.7 527 59.4
BraA09t39180Z Brassica rapa HOM05D003658 ORTHO05D004457 7.0e-168 594.7 527 59.4
Phvul.005G137400 Phaseolus vulgaris HOM05D003658 ORTHO05D004457 7.0e-168 594.7 535 58.7
THA.LOC104800615 Tarenaya hassleriana HOM05D003658 ORTHO05D004457 7.0e-168 594.7 535 58.7
EL10Ac1g00972 Beta vulgaris HOM05D003658 ORTHO05D004457 9.1e-168 594.3 536 59.1
Lalb_Chr14g0374811 Lupinus albus HOM05D003658 ORTHO05D004457 9.1e-168 594.3 535 58.7
Lalb_Chr22g0350161 Lupinus albus HOM05D003658 ORTHO05D004457 9.1e-168 594.3 535 58.7
CANSAT35G1266 Cannabis sativa HOM05D003658 ORTHO05D004457 1.2e-167 594.0 527 60.2
Sopen06g031760 Solanum pennellii HOM05D003658 ORTHO05D004457 1.2e-167 594.0 535 58.7
Gohir.A01G060300 Gossypium hirsutum HOM05D003658 ORTHO05D004457 1.6e-167 593.6 535 57.9
Atru.chr3.3712 Acer truncatum HOM05D003658 ORTHO05D004457 2.0e-167 593.2 527 59.0
arahy.Tifrunner.gnm1.ann1.F0P9EH Arachis hypogaea HOM05D003658 ORTHO05D004457 2.0e-167 593.2 535 59.1
Sed0019661 Sechium edule HOM05D003658 ORTHO05D004457 2.0e-167 593.2 535 58.3
ECA234G0865 Erigeron canadensis HOM05D003658 ORTHO05D004457 2.7e-167 592.8 535 59.4
RcHm_v2.0_Chr7g0219181 Rosa chinensis HOM05D003658 ORTHO05D004457 2.7e-167 592.8 527 59.4
BcaB07g32573 Brassica carinata HOM05D003658 ORTHO05D004457 3.5e-167 592.4 527 59.0
CSS0031195 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 3.5e-167 592.4 535 58.3
MBI17_g43655_MAGBIO Magnolia biondii HOM05D003658 ORTHO05D004457 3.5e-167 592.4 527 58.8
VMungo1080G1458 Vigna mungo HOM05D003658 ORTHO05D004457 3.5e-167 592.4 535 58.5
Lalb_Chr24g0394441 Lupinus albus HOM05D003658 ORTHO05D004457 4.5e-167 592.0 535 58.3
QL01p036935 Quercus lobata HOM05D003658 ORTHO05D004457 4.5e-167 592.0 537 58.7
RcHm_v2.0_Chr2g0124141 Rosa chinensis HOM05D003658 ORTHO05D004457 4.5e-167 592.0 527 59.4
Sed0011385 Sechium edule HOM05D003658 ORTHO05D004457 4.5e-167 592.0 536 58.2
TAR623G0185 Trochodendron aralioides HOM05D003658 ORTHO05D004457 4.5e-167 592.0 527 58.8
Aa31LG4G17270 Aethionema arabicum HOM05D003658 ORTHO05D004457 5.9e-167 591.7 527 59.2
AagrBONN_evm.TU.Sc2ySwM_228.578 Anthoceros agrestis HOM05D003658 ORTHO05D004457 5.9e-167 591.7 539 59.0
Nn3g19734 Nelumbo nucifera HOM05D003658 ORTHO05D004457 5.9e-167 591.7 535 58.3
Prupe.6G093800 Prunus persica HOM05D003658 ORTHO05D004457 5.9e-167 591.7 527 59.6
AL1G43750 Arabidopsis lyrata HOM05D003658 ORTHO05D004457 7.7e-167 591.3 527 59.2
AUR62033373 Chenopodium quinoa HOM05D003658 ORTHO05D004457 7.7e-167 591.3 531 59.3
Gohir.D01G046800 Gossypium hirsutum HOM05D003658 ORTHO05D004457 7.7e-167 591.3 535 57.6
Gorai.002G066300 Gossypium raimondii HOM05D003658 ORTHO05D004457 7.7e-167 591.3 535 57.6
TAR369G0890 Trochodendron aralioides HOM05D003658 ORTHO05D004457 1.0e-166 590.9 527 58.6
CSS0000103 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 1.3e-166 590.5 535 59.1
CSS0002392 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 1.3e-166 590.5 535 59.1
MELO3C013218.2 Cucumis melo HOM05D003658 ORTHO05D004457 1.3e-166 590.5 535 57.9
CsaV3_7G021350 Cucumis sativus L. HOM05D003658 ORTHO05D004457 1.3e-166 590.5 534 58.1
Oeu046772.1 Olea europaea HOM05D003658 ORTHO05D004457 1.3e-166 590.5 535 58.3
unitig_8.g4304 Utricularia gibba HOM05D003658 ORTHO05D004457 1.3e-166 590.5 528 59.5
ATR0561G124 Amborella trichopoda HOM05D003658 ORTHO05D004457 1.7e-166 590.1 527 59.2
arahy.Tifrunner.gnm1.ann1.Z66RMF Arachis hypogaea HOM05D003658 ORTHO05D004457 1.7e-166 590.1 535 58.5
AUR62004284 Chenopodium quinoa HOM05D003658 ORTHO05D004457 1.7e-166 590.1 527 59.6
MD11G1125100 Malus domestica HOM05D003658 ORTHO05D004457 1.7e-166 590.1 535 58.1
CSS0048503 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 2.3e-166 589.7 535 58.1
Glyma.15G045100 Glycine max HOM05D003658 ORTHO05D004457 2.3e-166 589.7 542 57.6
Aqoxy7G00983 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 2.9e-166 589.3 527 59.4
AT1G29900 Arabidopsis thaliana HOM05D003658 ORTHO05D004457 2.9e-166 589.3 527 58.8
MSTRG.24196 Avicennia marina HOM05D003658 ORTHO05D004457 2.9e-166 589.3 535 58.3
CDE02G3705 Ceratophyllum demersum HOM05D003658 ORTHO05D004457 2.9e-166 589.3 535 58.1
COL.COLO4_32786 Corchorus olitorius HOM05D003658 ORTHO05D004457 3.8e-166 589.0 535 57.6
TWI31G0613 Tripterygium wilfordii HOM05D003658 ORTHO05D004457 3.8e-166 589.0 535 58.5
TWI75G0848 Tripterygium wilfordii HOM05D003658 ORTHO05D004457 3.8e-166 589.0 535 58.3
Ciclev10027703m.g Citrus clementina HOM05D003658 ORTHO05D004457 5.0e-166 588.6 527 59.0
Manes.04G025400 Manihot esculenta HOM05D003658 ORTHO05D004457 5.0e-166 588.6 535 58.3
CARHR029540 Cardamine hirsuta HOM05D003658 ORTHO05D004457 6.5e-166 588.2 527 58.8
CBR_g16075 Chara braunii HOM05D003658 ORTHO05D004457 6.5e-166 588.2 527 59.6
Sc12g0008310 Simmondsia chinensis HOM05D003658 ORTHO05D004457 6.5e-166 588.2 527 58.8
FvH4_1g25660 Fragaria vesca HOM05D003658 ORTHO05D004457 8.6e-166 587.8 527 58.6
Glyma.13G328600 Glycine max HOM05D003658 ORTHO05D004457 8.6e-166 587.8 546 57.5
HanXRQChr09g0251621 Helianthus annuus HOM05D003658 ORTHO05D004457 8.6e-166 587.8 535 59.1
SMO116G0226 Selaginella moellendorffii HOM05D003658 ORTHO05D004457 8.6e-166 587.8 531 58.9
arahy.Tifrunner.gnm1.ann1.HT4L1Y Arachis hypogaea HOM05D003658 ORTHO05D004457 1.9e-165 586.6 535 58.3
CDE08G0949 Ceratophyllum demersum HOM05D003658 ORTHO05D004457 1.9e-165 586.6 535 57.4
Potri.010G023100 Populus trichocarpa HOM05D003658 ORTHO05D004457 1.9e-165 586.6 535 57.9
Thecc.07G099900 Theobroma cacao HOM05D003658 ORTHO05D004457 1.9e-165 586.6 527 57.9
Carub.0001s2812 Capsella rubella HOM05D003658 ORTHO05D004457 3.3e-165 585.9 527 58.6
Cre08.g358580 Chlamydomonas reinhardtii HOM05D003658 ORTHO05D004457 3.3e-165 585.9 539 58.3
Lj4A607T48 Lonicera japonica HOM05D003658 ORTHO05D004457 3.3e-165 585.9 545 58.5
HanXRQChr15g0493841 Helianthus annuus HOM05D003658 ORTHO05D004457 4.2e-165 585.5 535 58.7
Duzib213G0488 Durio zibethinus HOM05D003658 ORTHO05D004457 5.5e-165 585.1 535 57.0
arahy.Tifrunner.gnm1.ann1.SY27G3 Arachis hypogaea HOM05D003658 ORTHO05D004457 7.2e-165 584.7 535 58.1
Duzib170G0243 Durio zibethinus HOM05D003658 ORTHO05D004457 7.2e-165 584.7 535 57.6
Actinidia03749 Actinidia chinensis HOM05D003658 ORTHO05D004457 9.5e-165 584.3 527 58.3
Ca_01436_v3 Cicer arietinum L. HOM05D003658 ORTHO05D004457 9.5e-165 584.3 542 57.2
Ah.05g175890 Amaranthus hybridus HOM05D003658 ORTHO05D004457 1.2e-164 583.9 535 58.9
Lj3g0017853 Lotus japonicus HOM05D003658 ORTHO05D004457 1.2e-164 583.9 541 57.5
HPP92_005503 Vanilla planifolia HOM05D003658 ORTHO05D004457 1.6e-164 583.6 529 59.2
Pp3c1_18250 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.1e-164 583.2 527 58.8
Psat5g277200 Pisum sativum HOM05D003658 ORTHO05D004457 2.1e-164 583.2 539 57.7
arahy.Tifrunner.gnm1.ann1.1XIG7Z Arachis hypogaea HOM05D003658 ORTHO05D004457 3.6e-164 582.4 528 58.3
Peaxi162Scf00072g00510 Petunia axillaris HOM05D003658 ORTHO05D004457 4.7e-164 582.0 532 58.3
Pp3c2_19430 Physcomitrium patens HOM05D003658 ORTHO05D004457 4.7e-164 582.0 527 58.4
Nitab4.5_0000106g0020 Nicotiana tabacum HOM05D003658 ORTHO05D004457 8.0e-164 581.3 545 57.6
Nitab4.5_0010960g0010 Nicotiana tabacum HOM05D003658 ORTHO05D004457 8.0e-164 581.3 527 59.0
MD03G1111400 Malus domestica HOM05D003658 ORTHO05D004457 1.0e-163 580.9 535 58.1
PRCOL_00001523 Prasinoderma coloniale HOM05D003658 ORTHO05D004457 1.4e-163 580.5 547 56.5
Eucgr.F04457 Eucalyptus grandis HOM05D003658 ORTHO05D004457 1.8e-163 580.1 527 58.3
Lsat_1_v5_gn_9_7920 Lactuca sativa HOM05D003658 ORTHO05D004457 1.8e-163 580.1 530 58.9
ClCG09G021680 Citrullus lanatus HOM05D003658 ORTHO05D004457 3.0e-163 579.3 535 57.2
DCAR_016522 Daucus carota HOM05D003658 ORTHO05D004457 3.0e-163 579.3 537 57.4
Haze_23933 Corylus avellana HOM05D003658 ORTHO05D004457 5.2e-163 578.6 537 57.2
Mapoly0126s0034 Marchantia polymorpha HOM05D003658 ORTHO05D004457 5.2e-163 578.6 527 58.1
Medtr2g093280 Medicago truncatula HOM05D003658 ORTHO05D004457 1.2e-162 577.4 542 57.0
Cfa011371 Carpinus fangiana HOM05D003658 ORTHO05D004457 1.5e-162 577.0 527 57.3
Zm00001eb160030 Zea mays HOM05D003658 ORTHO05D004457 2.0e-162 576.6 531 58.8
Zm00001eb356970 Zea mays HOM05D003658 ORTHO05D004457 2.0e-162 576.6 523 59.5
FAN28G2851 Fragaria x ananassa HOM05D003658 ORTHO05D004457 2.6e-162 576.2 527 57.9
FAN26G3193 Fragaria x ananassa HOM05D003658 ORTHO05D004457 4.4e-162 575.5 527 57.9
Sabra10G0015500 Salix brachista HOM05D003658 ORTHO05D004457 2.2e-161 573.2 535 57.2
MCO07G210 Micromonas commoda HOM05D003658 ORTHO05D004457 2.3e-158 563.1 533 56.7
DCAR_026092 Daucus carota HOM05D003658 ORTHO05D004457 2.9e-158 562.8 527 57.1
SHI06033 Sapria himalayana HOM05D003658 ORTHO05D004457 1.5e-157 560.5 528 57.0
vmacro14471 Vaccinium macrocarpon HOM05D003658 ORTHO05D004457 2.5e-157 559.7 599 52.3
arahy.Tifrunner.gnm1.ann1.YNZQ4S Arachis hypogaea HOM05D003658 ORTHO05D004457 4.3e-157 558.9 535 56.8
Rhsim01G0220800 Rhododendron simsii HOM05D003658 ORTHO05D004457 7.3e-157 558.1 593 52.3
Dinv32798 Davidia involucrata HOM05D003658 ORTHO05D004457 2.4e-144 516.5 460 59.6
CAN.G1001.10 Capsicum annuum HOM05D003658 ORTHO05D004457 2.9e-137 493.0 410 62.9
Nn2g10669 Nelumbo nucifera HOM05D003658 ORTHO05D004457 7.1e-136 488.4 414 61.1
Nitab4.5_0000816g0110 Nicotiana tabacum HOM05D003658 ORTHO05D004457 2.1e-135 486.9 501 54.3
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.2e-132 477.6 541 47.5
TPR.G11612 Trifolium pratense HOM05D003658 ORTHO05D004457 1.2e-132 477.6 542 50.7
Cfa011369 Carpinus fangiana HOM05D003658 ORTHO05D004457 1.6e-132 477.2 410 60.5
MBI17_g19523_MAGBIO Magnolia biondii HOM05D003658 ORTHO05D004457 3.8e-129 466.1 461 55.1
Oeu047812.2 Olea europaea HOM05D003658 ORTHO05D004457 1.9e-128 463.8 535 49.5
GSVIVG01025125001 Vitis vinifera HOM05D003658 ORTHO05D004457 1.6e-127 460.7 527 49.9
SalBow6G4004 Salvia bowleyana HOM05D003658 ORTHO05D004457 4.9e-121 439.1 535 46.9
Actinidia07110 Actinidia chinensis HOM05D003658 ORTHO05D004457 1.2e-114 417.9 373 60.1
Zm00001eb440860 Zea mays HOM05D003658 ORTHO05D004457 2.7e-111 406.8 325 64.9
Nitab4.5_0010336g0040 Nicotiana tabacum HOM05D003658 ORTHO05D004457 2.1e-108 397.1 527 46.1
Cfa022738 Carpinus fangiana HOM05D003658 ORTHO05D004457 5.8e-106 389.0 532 42.3
Haze_26134 Corylus avellana HOM05D003658 ORTHO05D004457 1.9e-101 374.0 532 39.3
Actinidia24075 Actinidia chinensis HOM05D003658 ORTHO05D004457 6.9e-99 365.5 511 44.8
MD12G1166200 Malus domestica HOM05D003658 ORTHO05D004457 6.7e-94 349.0 346 52.9
Cpa.g.sc81.16 Carica papaya HOM05D003658 ORTHO05D004457 4.1e-75 286.6 565 34.9
Glyma.20G148821 Glycine max HOM05D003658 ORTHO05D004457 6.5e-57 226.1 160 68.8
Peaxi162Scf00809g00417 Petunia axillaris HOM05D003658 ORTHO05D004457 2.4e-51 207.6 457 34.6
Haze_26812 Corylus avellana HOM05D003658 ORTHO05D004457 1.5e-40 171.8 460 28.7
CAN.G1001.11 Capsicum annuum HOM05D003658 ORTHO05D004457 1.1e-35 155.6 423 29.8
Glyma.20G148861 Glycine max HOM05D003658 ORTHO05D004457 1.5e-32 145.2 92 71.7
Aqoxy84s009 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 1.2e-31 142.1 126 62.7
ATR0609G052 Amborella trichopoda HOM05D003658 ORTHO05D004457 7.5e-29 132.9 89 70.8
Dinv14501 Davidia involucrata HOM05D003658 ORTHO05D004457 4.6e-26 123.6 440 25.9
TAR633G2225 Trochodendron aralioides HOM05D003658 ORTHO05D004457 1.5e-21 108.6 77 71.4
Dinv14502 Davidia involucrata HOM05D003658 ORTHO05D004457 4.4e-21 107.1 121 48.8
Sc12g0005830 Simmondsia chinensis HOM05D003658 ORTHO05D004457 1.6e-18 98.6 176 39.2
Sc12g0005810 Simmondsia chinensis HOM05D003658 ORTHO05D004457 2.3e-17 94.7 100 47.0
TAR633G0489 Trochodendron aralioides HOM05D003658 ORTHO05D004457 2.3e-17 94.7 77 57.1
Sc12g0005820 Simmondsia chinensis HOM05D003658 ORTHO05D004457 1.1e-14 85.9 121 36.4
Os01g0570700 Oryza sativa ssp. japonica HOM05D003658 ORTHO05D004457 1.2e-13 82.4 180 32.8
CAN.G916.7 Capsicum annuum HOM05D003658 ORTHO05D003835 4.6e-10 70.5 54 61.1
Cc01_g11620 Coffea canephora HOM05D003658 ORTHO05D004457 2.3e-09 68.2 90 41.1
TAR633G2601 Trochodendron aralioides HOM05D003658 ORTHO05D004457 6.6e-09 66.6 154 31.2
Lj4C607T13 Lonicera japonica HOM05D003658 ORTHO05D004457 2.1e-07 61.6 95 30.5
Aqoxy7G00992 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 4.8e-07 60.5 156 26.3


User provided reference genes

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