Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26564 Corylus avellana HOM05D003508 ORTHO05D004579 3.9e-221 771.2 385 100.0
Cpa.g.sc183.13 Carica papaya HOM05D003508 ORTHO05D004579 6.2e-78 295.4 324 51.2
MD02G1256300 Malus domestica HOM05D003508 ORTHO05D004579 9.0e-77 291.6 309 52.1
Cfa010322 Carpinus fangiana HOM05D003508 ORTHO05D004579 1.5e-76 290.8 309 52.4
Phvul.007G021200 Phaseolus vulgaris HOM05D003508 ORTHO05D004579 1.5e-76 290.8 313 52.1
ATR0081G016 Amborella trichopoda HOM05D003508 ORTHO05D004579 2.0e-76 290.4 309 50.8
Glyma.20G109900 Glycine max HOM05D003508 ORTHO05D004579 2.6e-76 290.0 309 52.1
MD07G1064100 Malus domestica HOM05D003508 ORTHO05D004579 2.6e-76 290.0 309 52.4
Lj5g0024073 Lotus japonicus HOM05D003508 ORTHO05D004579 7.6e-76 288.5 309 51.5
CANSAT56G3087 Cannabis sativa HOM05D003508 ORTHO05D004579 9.9e-76 288.1 309 52.1
QL04p046077 Quercus lobata HOM05D003508 ORTHO05D004579 9.9e-76 288.1 314 50.3
Glyma.10G279800 Glycine max HOM05D003508 ORTHO05D004579 1.7e-75 287.3 309 52.1
Hund11567 Selenicereus undatus HOM05D003508 ORTHO05D004579 1.7e-75 287.3 314 51.3
VMungo0720G2493 Vigna mungo HOM05D003508 ORTHO05D004579 1.7e-75 287.3 313 51.4
CiPaw.13G040400 Carya illinoinensis HOM05D003508 ORTHO05D004579 2.2e-75 287.0 313 51.1
Manes.07G087500 Manihot esculenta HOM05D003508 ORTHO05D004579 2.2e-75 287.0 310 51.3
Medtr1g112230 Medicago truncatula HOM05D003508 ORTHO05D004579 2.2e-75 287.0 309 51.8
SMO203G0120 Selaginella moellendorffii HOM05D003508 ORTHO05D004579 2.2e-75 287.0 309 49.8
Lalb_Chr06g0166461 Lupinus albus HOM05D003508 ORTHO05D004579 4.9e-75 285.8 334 49.7
PSO339G4868 Papaver somniferum HOM05D003508 ORTHO05D004579 4.9e-75 285.8 309 51.5
Ciclev10015368m.g Citrus clementina HOM05D003508 ORTHO05D004579 6.4e-75 285.4 309 50.5
Prupe.2G078900 Prunus persica HOM05D003508 ORTHO05D004579 1.1e-74 284.6 309 51.1
Hund14639 Selenicereus undatus HOM05D003508 ORTHO05D004579 1.1e-74 284.6 314 50.3
Actinidia34720 Actinidia chinensis HOM05D003508 ORTHO05D004579 1.9e-74 283.9 309 50.2
PSO384G2067 Papaver somniferum HOM05D003508 ORTHO05D004579 1.9e-74 283.9 309 51.5
Potri.008G021100 Populus trichocarpa HOM05D003508 ORTHO05D004579 1.9e-74 283.9 310 50.3
TWI38G0289 Tripterygium wilfordii HOM05D003508 ORTHO05D004579 1.9e-74 283.9 312 51.3
Migut.F00911 Erythranthe guttata HOM05D003508 ORTHO05D004579 2.4e-74 283.5 308 51.0
RcHm_v2.0_Chr1g0332421 Rosa chinensis HOM05D003508 ORTHO05D004579 2.4e-74 283.5 313 50.2
arahy.Tifrunner.gnm1.ann1.Y4RU6H Arachis hypogaea HOM05D003508 ORTHO05D004579 3.2e-74 283.1 319 50.2
Lalb_Chr02g0146341 Lupinus albus HOM05D003508 ORTHO05D004579 3.2e-74 283.1 334 49.4
Lalb_Chr21g0309221 Lupinus albus HOM05D003508 ORTHO05D004579 3.2e-74 283.1 334 49.1
Sabra08G0014400 Salix brachista HOM05D003508 ORTHO05D004579 3.2e-74 283.1 313 50.5
Potri.010G237900 Populus trichocarpa HOM05D003508 ORTHO05D004579 4.2e-74 282.7 310 50.0
AT2G38700 Arabidopsis thaliana HOM05D003508 ORTHO05D004579 5.4e-74 282.3 309 50.2
Thhalv10016888m.g Eutrema salsugineum HOM05D003508 ORTHO05D004579 5.4e-74 282.3 309 49.8
Nitab4.5_0000691g0130 Nicotiana tabacum HOM05D003508 ORTHO05D004579 5.4e-74 282.3 315 50.2
Aa31sc79G100 Aethionema arabicum HOM05D003508 ORTHO05D004579 7.1e-74 282.0 309 51.8
Aqoxy4G02791 Aquilegia oxysepala HOM05D003508 ORTHO05D004579 7.1e-74 282.0 309 49.8
Lj3A928T54 Lonicera japonica HOM05D003508 ORTHO05D004579 7.1e-74 282.0 307 49.8
PGR044G1695 Punica granatum HOM05D003508 ORTHO05D004579 7.1e-74 282.0 310 50.3
Sp4g21060 Schrenkiella parvula HOM05D003508 ORTHO05D004579 7.1e-74 282.0 309 49.8
GSVIVG01011287001 Vitis vinifera HOM05D003508 ORTHO05D004579 7.1e-74 282.0 325 49.2
Aa31sc26G40 Aethionema arabicum HOM05D003508 ORTHO05D004579 9.3e-74 281.6 309 51.5
CBR_g26358 Chara braunii HOM05D003508 ORTHO05D004579 9.3e-74 281.6 328 47.9
AUR62007446 Chenopodium quinoa HOM05D003508 ORTHO05D004579 9.3e-74 281.6 323 49.8
FAN01G1243 Fragaria x ananassa HOM05D003508 ORTHO05D004579 9.3e-74 281.6 326 48.8
FAN06G4590 Fragaria x ananassa HOM05D003508 ORTHO05D004579 9.3e-74 281.6 326 48.8
FAN10G3478 Fragaria x ananassa HOM05D003508 ORTHO05D004579 9.3e-74 281.6 326 48.8
Actinidia06698 Actinidia chinensis HOM05D003508 ORTHO05D004579 1.2e-73 281.2 309 50.5
AT3G54250 Arabidopsis thaliana HOM05D003508 ORTHO05D004579 1.2e-73 281.2 309 51.5
A09p47250 Brassica napus HOM05D003508 ORTHO05D004579 1.2e-73 281.2 360 46.1
BolC8t50554H Brassica oleracea HOM05D003508 ORTHO05D004579 1.2e-73 281.2 403 43.4
Duzib106G0726 Durio zibethinus HOM05D003508 ORTHO05D004579 1.2e-73 281.2 307 50.8
Gorai.013G012400 Gossypium raimondii HOM05D003508 ORTHO05D004579 1.2e-73 281.2 311 49.8
Manes.10G058800 Manihot esculenta HOM05D003508 ORTHO05D004579 1.2e-73 281.2 310 51.0
HPP92_006808 Vanilla planifolia HOM05D003508 ORTHO05D004579 1.2e-73 281.2 309 50.2
AL4G36000 Arabidopsis lyrata HOM05D003508 ORTHO05D004579 1.6e-73 280.8 309 49.8
C08p29490 Brassica napus HOM05D003508 ORTHO05D004579 1.6e-73 280.8 403 43.4
BraA09t40187Z Brassica rapa HOM05D003508 ORTHO05D004579 1.6e-73 280.8 360 46.1
Gohir.A13G010700 Gossypium hirsutum HOM05D003508 ORTHO05D004579 1.6e-73 280.8 311 49.8
Sopen04g004800 Solanum pennellii HOM05D003508 ORTHO05D004579 1.6e-73 280.8 319 49.2
THA.LOC104824218 Tarenaya hassleriana HOM05D003508 ORTHO05D004579 1.6e-73 280.8 309 50.5
CARHR133390 Cardamine hirsuta HOM05D003508 ORTHO05D004579 2.1e-73 280.4 309 50.2
Hma1.2p1_0356F.1_g134090 Hydrangea macrophylla HOM05D003508 ORTHO05D004579 2.1e-73 280.4 309 50.2
Carub.0004s2070 Capsella rubella HOM05D003508 ORTHO05D004579 2.7e-73 280.0 309 49.8
Thhalv10010411m.g Eutrema salsugineum HOM05D003508 ORTHO05D004579 2.7e-73 280.0 309 50.2
Nitab4.5_0001437g0070 Nicotiana tabacum HOM05D003508 ORTHO05D004579 2.7e-73 280.0 309 49.5
TWI63G0607 Tripterygium wilfordii HOM05D003508 ORTHO05D004579 3.5e-73 279.6 312 50.6
CARHR164170 Cardamine hirsuta HOM05D003508 ORTHO05D004579 4.6e-73 279.3 360 46.1
CSS0049709 Camellia sinensis var. sinensis HOM05D003508 ORTHO05D004579 6.0e-73 278.9 309 50.2
THA.LOC104811335 Tarenaya hassleriana HOM05D003508 ORTHO05D004579 6.0e-73 278.9 309 49.8
Thecc.10G106000 Theobroma cacao HOM05D003508 ORTHO05D004579 6.0e-73 278.9 307 50.8
AL5G35290 Arabidopsis lyrata HOM05D003508 ORTHO05D004579 7.8e-73 278.5 309 50.2
Carub.0005s2084 Capsella rubella HOM05D003508 ORTHO05D004579 7.8e-73 278.5 309 50.2
AUR62027288 Chenopodium quinoa HOM05D003508 ORTHO05D004579 7.8e-73 278.5 314 50.0
Thhalv10023484m.g Eutrema salsugineum HOM05D003508 ORTHO05D004579 7.8e-73 278.5 309 50.2
Cc02_g09750 Coffea canephora HOM05D003508 ORTHO05D004579 1.0e-72 278.1 314 50.3
Dinv09607 Davidia involucrata HOM05D003508 ORTHO05D004579 1.0e-72 278.1 309 50.2
Eucgr.J00991 Eucalyptus grandis HOM05D003508 ORTHO05D004579 1.0e-72 278.1 308 50.6
SalBow6G1879 Salvia bowleyana HOM05D003508 ORTHO05D004579 1.0e-72 278.1 310 50.3
BcaC02g09078 Brassica carinata HOM05D003508 ORTHO05D004579 1.3e-72 277.7 403 43.2
C04p38200 Brassica napus HOM05D003508 ORTHO05D004579 1.3e-72 277.7 403 43.2
A04p05510 Brassica napus HOM05D003508 ORTHO05D004579 1.7e-72 277.3 403 43.2
BraA04t16251Z Brassica rapa HOM05D003508 ORTHO05D004579 1.7e-72 277.3 403 43.2
HanXRQChr11g0342191 Helianthus annuus HOM05D003508 ORTHO05D004579 1.7e-72 277.3 309 48.5
Sp5g08150 Schrenkiella parvula HOM05D003508 ORTHO05D004579 1.7e-72 277.3 309 50.2
FvH4_7g05610 Fragaria vesca HOM05D003508 ORTHO05D004579 2.3e-72 276.9 345 46.1
BolC4t25395H Brassica oleracea HOM05D003508 ORTHO05D004579 3.0e-72 276.6 403 43.2
CSS0009164 Camellia sinensis var. sinensis HOM05D003508 ORTHO05D004579 3.0e-72 276.6 309 50.2
Nitab4.5_0005622g0070 Nicotiana tabacum HOM05D003508 ORTHO05D004579 3.0e-72 276.6 331 48.3
Lsat_1_v5_gn_0_7601 Lactuca sativa HOM05D003508 ORTHO05D004579 3.9e-72 276.2 313 48.6
Eucgr.G02693 Eucalyptus grandis HOM05D003508 ORTHO05D004579 5.1e-72 275.8 314 48.7
TAR633G0880 Trochodendron aralioides HOM05D003508 ORTHO05D004579 5.1e-72 275.8 309 49.8
MSTRG.27535 Avicennia marina HOM05D003508 ORTHO05D004579 6.6e-72 275.4 307 49.2
BcaB02g08480 Brassica carinata HOM05D003508 ORTHO05D004579 6.6e-72 275.4 403 42.9
unitig_736.g22527 Utricularia gibba HOM05D003508 ORTHO05D004579 6.6e-72 275.4 308 48.4
ECA238G0717 Erigeron canadensis HOM05D003508 ORTHO05D004579 1.5e-71 274.2 309 48.5
SGA_v2.0_scaffold62G21342 Striga asiatica HOM05D003508 ORTHO05D004579 1.5e-71 274.2 319 48.6
MELO3C012357.2 Cucumis melo HOM05D003508 ORTHO05D004579 1.9e-71 273.9 325 47.7
Zm00001eb056620 Zea mays HOM05D003508 ORTHO05D004579 1.9e-71 273.9 309 49.8
Os02g0109100 Oryza sativa ssp. japonica HOM05D003508 ORTHO05D004579 2.5e-71 273.5 309 49.5
Sed0023449 Sechium edule HOM05D003508 ORTHO05D004579 2.5e-71 273.5 309 49.2
AagrBONN_evm.TU.Sc2ySwM_117.3316 Anthoceros agrestis HOM05D003508 ORTHO05D004579 3.3e-71 273.1 309 49.2
Zm00001eb257840 Zea mays HOM05D003508 ORTHO05D004579 3.3e-71 273.1 309 49.8
Peaxi162Scf00519g00710 Petunia axillaris HOM05D003508 ORTHO05D004579 4.3e-71 272.7 321 48.6
EL10Ac5g12977 Beta vulgaris HOM05D003508 ORTHO05D004579 7.3e-71 271.9 314 49.0
Pp3c5_15100 Physcomitrium patens HOM05D003508 ORTHO05D004579 7.3e-71 271.9 309 48.5
vmacro10305 Vaccinium macrocarpon HOM05D003508 ORTHO05D004579 2.1e-70 270.4 309 49.2
CAN.G645.2 Capsicum annuum HOM05D003508 ORTHO05D004579 2.8e-70 270.0 320 47.8
Nitab4.5_0003927g0020 Nicotiana tabacum HOM05D003508 ORTHO05D004579 2.8e-70 270.0 315 49.5
PGSC0003DMG400023978 Solanum tuberosum HOM05D003508 ORTHO05D004579 3.6e-70 269.6 309 48.5
Pp3c6_12700 Physcomitrium patens HOM05D003508 ORTHO05D004579 8.1e-70 268.5 333 46.2
Solyc11g007020.2 Solanum lycopersicum HOM05D003508 ORTHO05D004579 8.1e-70 268.5 309 48.5
Sopen11g002940 Solanum pennellii HOM05D003508 ORTHO05D004579 8.1e-70 268.5 309 48.5
Haze_03293 Corylus avellana HOM05D003508 ORTHO05D004579 1.8e-69 267.3 336 47.9
Rhsim09G0142500 Rhododendron simsii HOM05D003508 ORTHO05D004579 1.8e-69 267.3 308 49.4
arahy.Tifrunner.gnm1.ann1.Q6BHJ0 Arachis hypogaea HOM05D003508 ORTHO05D004579 2.0e-68 263.8 358 44.7
CiPaw.14G033200 Carya illinoinensis HOM05D003508 ORTHO05D004579 4.5e-68 262.7 296 49.7
Dinv11847 Davidia involucrata HOM05D003508 ORTHO05D004579 5.8e-68 262.3 315 47.6
FAN03G1980 Fragaria x ananassa HOM05D003508 ORTHO05D004579 7.6e-68 261.9 346 45.4
Nn6g34927 Nelumbo nucifera HOM05D003508 ORTHO05D004579 1.7e-67 260.8 309 48.5
CSS0018426 Camellia sinensis var. sinensis HOM05D003508 ORTHO05D004579 3.8e-67 259.6 320 46.2
Sabra10G0186100 Salix brachista HOM05D003508 ORTHO05D004579 6.4e-67 258.8 292 48.3
Atru.chr12.1012 Acer truncatum HOM05D003508 ORTHO05D004579 2.4e-66 256.9 282 50.0
PGSC0003DMG400016014 Solanum tuberosum HOM05D003508 ORTHO05D004579 3.2e-66 256.5 323 46.1
ClCG05G021710 Citrullus lanatus HOM05D003508 ORTHO05D004579 3.5e-65 253.1 318 46.5
TPR.G2474 Trifolium pratense HOM05D003508 ORTHO05D004579 8.7e-64 248.4 296 48.3
SHI21271 Sapria himalayana HOM05D003508 ORTHO05D004579 3.7e-62 243.0 330 46.1
COL.COLO4_24552 Corchorus olitorius HOM05D003508 ORTHO05D004579 6.2e-62 242.3 307 45.9
Peaxi162Scf00173g00046 Petunia axillaris HOM05D003508 ORTHO05D004579 5.3e-61 239.2 308 46.1
Lsat_1_v5_gn_2_104600 Lactuca sativa HOM05D003508 ORTHO05D004579 1.7e-59 234.2 309 44.3
Ah.02g117270 Amaranthus hybridus HOM05D003508 ORTHO05D004579 2.9e-59 233.4 310 45.5
Cfa022308 Carpinus fangiana HOM05D003508 ORTHO05D004579 4.6e-57 226.1 293 44.7
Psat6g231280 Pisum sativum HOM05D003508 ORTHO05D004579 7.9e-57 225.3 308 43.5
Rhsim03G0099000 Rhododendron simsii HOM05D003508 ORTHO05D004579 1.3e-56 224.6 393 38.4
Mapoly0007s0128 Marchantia polymorpha HOM05D003508 ORTHO05D004579 4.3e-55 219.5 257 46.7
SGA_v2.0_scaffold7G04100 Striga asiatica HOM05D003508 ORTHO05D004579 4.8e-54 216.1 308 42.9
Ca_25671_v3 Cicer arietinum L. HOM05D003508 ORTHO05D004579 4.0e-53 213.0 307 43.0
Actinidia36696 Actinidia chinensis HOM05D003508 ORTHO05D004579 1.7e-51 207.6 253 47.4
CsaV3_5G035560 Cucumis sativus L. HOM05D003508 ORTHO05D004579 3.8e-51 206.5 309 42.1
Sc06g0002320 Simmondsia chinensis HOM05D003508 ORTHO05D004579 1.9e-50 204.1 221 50.7
Haze_01394 Corylus avellana HOM05D003508 ORTHO05D004579 8.7e-48 195.3 280 43.9
BcaNung06364 Brassica carinata HOM05D003508 ORTHO05D004579 2.8e-46 190.3 251 45.8
Gohir.D13G011400 Gossypium hirsutum HOM05D003508 ORTHO05D004579 1.2e-41 174.9 173 51.4
Actinidia18595 Actinidia chinensis HOM05D003508 ORTHO05D004579 4.6e-41 172.9 301 39.9
MBI16_g39317_MAGBIO Magnolia biondii HOM05D003508 ORTHO05D004579 2.5e-39 167.2 183 49.2
Oeu026584.1 Olea europaea HOM05D003508 ORTHO05D004579 5.7e-39 166.0 176 50.0
DCAR_006338 Daucus carota HOM05D003508 ORTHO05D004579 4.8e-38 162.9 169 48.5
MBI17_g42676_MAGBIO Magnolia biondii HOM05D003508 ORTHO05D004579 7.7e-36 155.6 217 44.7
Os02g0107200 Oryza sativa ssp. japonica HOM05D003508 ORTHO05D004579 1.6e-33 147.9 170 49.4
CDE04G3073 Ceratophyllum demersum HOM05D003508 ORTHO05D004579 7.9e-33 145.6 164 50.6
QL04p041546 Quercus lobata HOM05D003508 ORTHO05D004579 8.8e-32 142.1 199 44.7
PGSC0003DMG400011919 Solanum tuberosum HOM05D003508 ORTHO05D004579 2.0e-28 131.0 180 44.4
SEGI_06330 Sequoiadendron giganteum HOM05D003508 ORTHO05D004579 1.2e-25 121.7 151 48.3
Lj2C31T21 Lonicera japonica HOM05D003508 ORTHO05D004579 2.7e-25 120.6 306 31.7
PGSC0003DMG400011923 Solanum tuberosum HOM05D003508 ORTHO05D004579 8.8e-24 115.5 128 50.8
CDE04G2729 Ceratophyllum demersum HOM05D003508 ORTHO05D004579 2.2e-22 110.9 98 56.1
Oeu025589.3 Olea europaea HOM05D003508 ORTHO05D004579 8.2e-22 109.0 113 51.3
Rhsim03G0099400 Rhododendron simsii HOM05D003508 ORTHO05D004579 2.2e-19 100.9 221 34.8
MBI16_g04457_MAGBIO Magnolia biondii HOM05D003508 ORTHO05D004579 1.4e-16 91.7 127 45.7
SMO203G0126 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 2.6e-15 87.4 81 53.1
Haze_01395 Corylus avellana HOM05D003508 ORTHO05D004579 3.3e-15 87.0 62 61.3
Nn8g38869 Nelumbo nucifera HOM05D003508 ORTHO05D004579 7.5e-15 85.9 62 59.7
BcaNung06362 Brassica carinata HOM05D003508 ORTHO05D004579 1.7e-14 84.7 62 61.3
TAR636G0237 Trochodendron aralioides HOM05D003508 ORTHO05D004579 3.7e-14 83.6 60 63.3
CsaV3_7G016190 Cucumis sativus L. HOM05D003508 ORTHO05D004579 6.3e-14 82.8 60 61.7
Atru.chr5.1129 Acer truncatum HOM05D003508 ORTHO05D004579 1.8e-13 81.3 62 59.7
Nn5g30614 Nelumbo nucifera HOM05D003508 ORTHO05D004579 9.1e-13 79.0 69 53.6
SMO197G0052 Selaginella moellendorffii HOM05D003508 ORTHO05D004579 7.2e-10 69.3 108 40.7
Nitab4.5_0000561g0090 Nicotiana tabacum HOM05D003508 ORTHO05D017053 9.4e-10 68.9 91 42.9
Gohir.D06G044601 Gossypium hirsutum HOM05D003508 ORTHO05D006303 2.7e-09 67.4 60 51.7
Gohir.D06G067600 Gossypium hirsutum HOM05D003508 ORTHO05D006303 3.6e-09 67.0 59 52.5
Gorai.003G053700 Gossypium raimondii HOM05D003508 ORTHO05D017053 3.6e-09 67.0 59 52.5
Gorai.008G061300 Gossypium raimondii HOM05D003508 ORTHO05D017053 6.1e-09 66.2 82 42.7
Gohir.D07G221800 Gossypium hirsutum HOM05D003508 ORTHO05D017053 6.8e-08 62.8 56 51.8
Gorai.001G156500 Gossypium raimondii HOM05D003508 ORTHO05D017053 6.8e-08 62.8 56 51.8
Gohir.D11G205701 Gossypium hirsutum HOM05D003508 ORTHO05D017053 8.8e-08 62.4 56 53.6
CsaV3_7G016180 Cucumis sativus L. HOM05D003508 ORTHO05D004579 1.7e-06 58.2 149 30.2
HanXRQChr15g0478241 Helianthus annuus HOM05D003508 ORTHO05D004579 1.7e-06 58.2 131 32.8
Gohir.D10G141300 Gossypium hirsutum HOM05D003508 ORTHO05D017053 2.2e-06 57.8 59 45.8


User provided reference genes

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