Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26546 Corylus avellana HOM05D002170 ORTHO05D007478 8.9e-270 932.9 448 100.0
Haze_27328 Corylus avellana HOM05D002170 ORTHO05D007478 1.6e-186 656.4 329 94.8
Mapoly0033s0018 Marchantia polymorpha HOM05D002170 ORTHO05D007478 8.5e-79 298.5 330 45.5
Glyma.09G172700 Glycine max HOM05D002170 ORTHO05D007478 3.4e-75 286.6 360 43.3
Aqoxy3G04073 Aquilegia oxysepala HOM05D002170 ORTHO05D007478 4.4e-75 286.2 358 42.7
CiPaw.16G097200 Carya illinoinensis HOM05D002170 ORTHO05D007478 4.4e-75 286.2 358 42.5
Duzib068G1477 Durio zibethinus HOM05D002170 ORTHO05D007478 4.4e-75 286.2 360 42.2
FAN08G0558 Fragaria x ananassa HOM05D002170 ORTHO05D007478 1.7e-74 284.3 358 41.9
Manes.06G002900 Manihot esculenta HOM05D002170 ORTHO05D007478 1.7e-74 284.3 360 42.8
Haze_18913 Corylus avellana HOM05D002170 ORTHO05D007478 2.2e-74 283.9 358 42.5
Medtr6g071210 Medicago truncatula HOM05D002170 ORTHO05D007478 2.2e-74 283.9 360 42.2
Sed0008892 Sechium edule HOM05D002170 ORTHO05D007478 2.2e-74 283.9 359 41.2
Sc04g0004500 Simmondsia chinensis HOM05D002170 ORTHO05D007478 2.2e-74 283.9 358 42.7
QL10p031496 Quercus lobata HOM05D002170 ORTHO05D007478 2.8e-74 283.5 360 42.2
vmacro17769 Vaccinium macrocarpon HOM05D002170 ORTHO05D007478 2.8e-74 283.5 358 42.5
CsaV3_1G007330 Cucumis sativus L. HOM05D002170 ORTHO05D007478 3.7e-74 283.1 358 41.6
Lj2g0009559 Lotus japonicus HOM05D002170 ORTHO05D007478 3.7e-74 283.1 360 42.8
FvH4_5g17680 Fragaria vesca HOM05D002170 ORTHO05D007478 4.8e-74 282.7 358 41.9
FAN18G3495 Fragaria x ananassa HOM05D002170 ORTHO05D007478 4.8e-74 282.7 358 41.9
Rhsim08G0127800 Rhododendron simsii HOM05D002170 ORTHO05D007478 4.8e-74 282.7 358 42.7
TWI81G0098 Tripterygium wilfordii HOM05D002170 ORTHO05D007478 4.8e-74 282.7 358 41.1
AagrBONN_evm.TU.Sc2ySwM_362.1270 Anthoceros agrestis HOM05D002170 ORTHO05D007478 6.3e-74 282.3 358 40.5
BolC5t33589H Brassica oleracea HOM05D002170 ORTHO05D007478 6.3e-74 282.3 353 43.1
Duzib084G0411 Durio zibethinus HOM05D002170 ORTHO05D007478 6.3e-74 282.3 337 43.9
FAN04G0031 Fragaria x ananassa HOM05D002170 ORTHO05D007478 6.3e-74 282.3 358 41.9
Lalb_Chr22g0353421 Lupinus albus HOM05D002170 ORTHO05D007478 8.3e-74 282.0 361 42.1
Pp3c20_21870 Physcomitrium patens HOM05D002170 ORTHO05D007478 8.3e-74 282.0 330 44.2
BcaB04g18965 Brassica carinata HOM05D002170 ORTHO05D007478 1.1e-73 281.6 350 42.9
Cfa020634 Carpinus fangiana HOM05D002170 ORTHO05D007478 1.1e-73 281.6 359 42.1
Potri.015G030600 Populus trichocarpa HOM05D002170 ORTHO05D007478 1.1e-73 281.6 360 42.2
Cpa.g.sc3.360 Carica papaya HOM05D002170 ORTHO05D007478 1.4e-73 281.2 358 41.3
CDE06G2490 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 1.4e-73 281.2 360 41.7
Cre13.g578750 Chlamydomonas reinhardtii HOM05D002170 ORTHO05D007478 1.4e-73 281.2 329 42.6
PGR044G0130 Punica granatum HOM05D002170 ORTHO05D007478 1.4e-73 281.2 359 42.1
Atru.BG.197.p Acer truncatum HOM05D002170 ORTHO05D007478 1.8e-73 280.8 336 43.8
Atru.chr9.1597 Acer truncatum HOM05D002170 ORTHO05D007478 1.8e-73 280.8 336 43.8
BcaNung05883 Brassica carinata HOM05D002170 ORTHO05D007478 1.8e-73 280.8 350 42.6
Oeu023513.1 Olea europaea HOM05D002170 ORTHO05D007478 1.8e-73 280.8 359 41.5
Sabra15G0025500 Salix brachista HOM05D002170 ORTHO05D007478 1.8e-73 280.8 360 42.2
BcaB04g20814 Brassica carinata HOM05D002170 ORTHO05D007478 2.4e-73 280.4 350 42.6
BcaC09g48741 Brassica carinata HOM05D002170 ORTHO05D007478 2.4e-73 280.4 350 42.6
A01p36570 Brassica napus HOM05D002170 ORTHO05D007478 2.4e-73 280.4 350 42.6
DCAR_003532 Daucus carota HOM05D002170 ORTHO05D007478 2.4e-73 280.4 358 40.8
Glyma.07G105400 Glycine max HOM05D002170 ORTHO05D007478 3.1e-73 280.0 360 42.5
SalBow5G3655 Salvia bowleyana HOM05D002170 ORTHO05D007478 3.1e-73 280.0 330 43.9
Sp3g15930 Schrenkiella parvula HOM05D002170 ORTHO05D007478 3.1e-73 280.0 353 42.2
Actinidia09052 Actinidia chinensis HOM05D002170 ORTHO05D007478 4.1e-73 279.6 358 42.5
CANSAT35G0706 Cannabis sativa HOM05D002170 ORTHO05D007478 4.1e-73 279.6 358 42.5
Cc04_g09360 Coffea canephora HOM05D002170 ORTHO05D007478 4.1e-73 279.6 358 42.5
Lj9C416G6 Lonicera japonica HOM05D002170 ORTHO05D007478 4.1e-73 279.6 340 43.5
RcHm_v2.0_Chr7g0177971 Rosa chinensis HOM05D002170 ORTHO05D007478 4.1e-73 279.6 334 43.4
Hund22449 Selenicereus undatus HOM05D002170 ORTHO05D007478 4.1e-73 279.6 357 42.0
ClCG04G010450 Citrullus lanatus HOM05D002170 ORTHO05D007478 5.3e-73 279.3 358 41.1
MELO3C002149.2 Cucumis melo HOM05D002170 ORTHO05D007478 5.3e-73 279.3 358 40.8
Thecc.03G062200 Theobroma cacao HOM05D002170 ORTHO05D007478 5.3e-73 279.3 361 41.6
C05p48530 Brassica napus HOM05D002170 ORTHO05D007478 7.0e-73 278.9 353 42.5
Ciclev10020301m.g Citrus clementina HOM05D002170 ORTHO05D007478 7.0e-73 278.9 358 41.9
MD14G1239300 Malus domestica HOM05D002170 ORTHO05D007478 7.0e-73 278.9 358 42.2
Os02g0736400 Oryza sativa ssp. japonica HOM05D002170 ORTHO05D007478 7.0e-73 278.9 357 41.5
Prupe.5G236800 Prunus persica HOM05D002170 ORTHO05D007478 7.0e-73 278.9 358 41.6
arahy.Tifrunner.gnm1.ann1.DTQ5EB Arachis hypogaea HOM05D002170 ORTHO05D007478 9.1e-73 278.5 360 41.9
MSTRG.9351 Avicennia marina HOM05D002170 ORTHO05D007478 9.1e-73 278.5 358 41.9
CSS0009402 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 9.1e-73 278.5 337 43.6
CBR_g39071 Chara braunii HOM05D002170 ORTHO05D007478 9.1e-73 278.5 330 42.7
AUR62041617 Chenopodium quinoa HOM05D002170 ORTHO05D007478 9.1e-73 278.5 356 41.3
C01p46400 Brassica napus HOM05D002170 ORTHO05D007478 1.2e-72 278.1 350 42.3
ECA232G0406 Erigeron canadensis HOM05D002170 ORTHO05D007478 1.2e-72 278.1 352 41.8
Gohir.A09G175200 Gossypium hirsutum HOM05D002170 ORTHO05D007478 1.2e-72 278.1 334 43.4
Gorai.006G191200 Gossypium raimondii HOM05D002170 ORTHO05D007478 1.2e-72 278.1 334 43.4
Phvul.004G148000 Phaseolus vulgaris HOM05D002170 ORTHO05D007478 1.2e-72 278.1 336 43.5
Zm00001eb253890 Zea mays HOM05D002170 ORTHO05D007478 1.2e-72 278.1 357 41.2
arahy.Tifrunner.gnm1.ann1.U6RNCV Arachis hypogaea HOM05D002170 ORTHO05D007478 1.6e-72 277.7 360 42.2
CSS0042449 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 1.6e-72 277.7 334 43.7
CAN.G637.44 Capsicum annuum HOM05D002170 ORTHO05D007478 1.6e-72 277.7 358 41.9
Dinv05998 Davidia involucrata HOM05D002170 ORTHO05D007478 1.6e-72 277.7 327 43.4
HanXRQChr16g0511571 Helianthus annuus HOM05D002170 ORTHO05D007478 1.6e-72 277.7 352 41.5
Lalb_Chr14g0370711 Lupinus albus HOM05D002170 ORTHO05D007478 1.6e-72 277.7 359 41.2
PSO384G2182 Papaver somniferum HOM05D002170 ORTHO05D007478 1.6e-72 277.7 359 42.3
Solyc03g097910.4 Solanum lycopersicum HOM05D002170 ORTHO05D007478 1.6e-72 277.7 358 42.2
Sopen03g028630 Solanum pennellii HOM05D002170 ORTHO05D007478 1.6e-72 277.7 358 42.2
PGSC0003DMG400033683 Solanum tuberosum HOM05D002170 ORTHO05D007478 1.6e-72 277.7 358 42.2
Migut.D01219 Erythranthe guttata HOM05D002170 ORTHO05D007478 2.0e-72 277.3 358 41.9
Thhalv10020777m.g Eutrema salsugineum HOM05D002170 ORTHO05D007478 2.0e-72 277.3 353 41.9
HanXRQChr15g0492101 Helianthus annuus HOM05D002170 ORTHO05D007478 2.0e-72 277.3 352 41.8
SEGI_10571 Sequoiadendron giganteum HOM05D002170 ORTHO05D007478 2.0e-72 277.3 330 42.7
TPR.G22320 Trifolium pratense HOM05D002170 ORTHO05D007478 2.0e-72 277.3 360 41.7
HPP92_007961 Vanilla planifolia HOM05D002170 ORTHO05D007478 2.0e-72 277.3 358 40.8
BolC1t04600H Brassica oleracea HOM05D002170 ORTHO05D007478 3.5e-72 276.6 350 42.0
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 3.5e-72 276.6 329 43.2
Eucgr.K02286 Eucalyptus grandis HOM05D002170 ORTHO05D007478 3.5e-72 276.6 358 41.1
Hma1.2p1_0471F.1_g159440 Hydrangea macrophylla HOM05D002170 ORTHO05D007478 3.5e-72 276.6 366 41.5
MD06G1232500 Malus domestica HOM05D002170 ORTHO05D007478 3.5e-72 276.6 358 41.9
PSO339G1858 Papaver somniferum HOM05D002170 ORTHO05D007478 3.5e-72 276.6 359 42.3
Psat1g029560 Pisum sativum HOM05D002170 ORTHO05D007478 3.5e-72 276.6 329 43.5
A05p32010 Brassica napus HOM05D002170 ORTHO05D007478 5.9e-72 275.8 353 41.9
Lsat_1_v5_gn_0_10461 Lactuca sativa HOM05D002170 ORTHO05D007478 5.9e-72 275.8 358 40.5
SMO356G0689 Selaginella moellendorffii HOM05D002170 ORTHO05D007478 5.9e-72 275.8 332 42.5
TAR629G0118 Trochodendron aralioides HOM05D002170 ORTHO05D007478 5.9e-72 275.8 358 41.3
Ah.16g108010 Amaranthus hybridus HOM05D002170 ORTHO05D007478 7.7e-72 275.4 329 42.9
Ca_25357_v3 Cicer arietinum L. HOM05D002170 ORTHO05D007478 7.7e-72 275.4 360 41.9
Gohir.D09G169700 Gossypium hirsutum HOM05D002170 ORTHO05D007478 7.7e-72 275.4 334 43.1
THA.LOC104820334 Tarenaya hassleriana HOM05D002170 ORTHO05D007478 7.7e-72 275.4 334 42.8
GSVIVG01008478001 Vitis vinifera HOM05D002170 ORTHO05D007478 7.7e-72 275.4 348 43.4
EL10Ac2g03531 Beta vulgaris HOM05D002170 ORTHO05D007478 1.0e-71 275.0 329 42.9
CARHR093160 Cardamine hirsuta HOM05D002170 ORTHO05D007478 1.3e-71 274.6 353 40.8
BraA01t03721Z Brassica rapa HOM05D002170 ORTHO05D007478 1.7e-71 274.2 358 41.6
Carub.0003s1752 Capsella rubella HOM05D002170 ORTHO05D007478 1.7e-71 274.2 353 40.8
AT3G17810 Arabidopsis thaliana HOM05D002170 ORTHO05D007478 2.2e-71 273.9 352 40.9
AL3G30970 Arabidopsis lyrata HOM05D002170 ORTHO05D007478 2.9e-71 273.5 352 40.6
Pp3c23_13670 Physcomitrium patens HOM05D002170 ORTHO05D007478 2.9e-71 273.5 330 43.6
ATR0118G019 Amborella trichopoda HOM05D002170 ORTHO05D007478 8.5e-71 271.9 358 40.5
CiPaw.15G147300 Carya illinoinensis HOM05D002170 ORTHO05D007478 1.5e-70 271.2 323 43.3
PRCOL_00005290 Prasinoderma coloniale HOM05D002170 ORTHO05D007478 1.9e-70 270.8 319 43.3
MCO10G163 Micromonas commoda HOM05D002170 ORTHO05D007478 7.2e-70 268.9 352 40.9
AUR62036004 Chenopodium quinoa HOM05D002170 ORTHO05D007478 2.1e-69 267.3 345 40.6
BraA05t22032Z Brassica rapa HOM05D002170 ORTHO05D007478 2.7e-69 266.9 365 40.5
SHI19063 Sapria himalayana HOM05D002170 ORTHO05D007478 2.7e-69 266.9 327 42.2
Peaxi162Scf00171g01030 Petunia axillaris HOM05D002170 ORTHO05D007478 3.6e-69 266.5 358 41.9
Nitab4.5_0000430g0180 Nicotiana tabacum HOM05D002170 ORTHO05D007478 4.8e-66 256.1 308 43.8
Nitab4.5_0006581g0020 Nicotiana tabacum HOM05D002170 ORTHO05D007478 1.1e-65 255.0 308 43.2
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 3.3e-62 243.4 292 44.2
Aa31LG8G4690 Aethionema arabicum HOM05D002170 ORTHO05D007478 1.0e-60 238.4 417 34.5
CDE04G1365 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 5.7e-59 232.6 333 37.8
BcaC01g03730 Brassica carinata HOM05D002170 ORTHO05D007478 3.7e-58 229.9 348 38.5
unitig_27.g25082 Utricularia gibba HOM05D002170 ORTHO05D007478 5.6e-54 216.1 238 45.0
BolC3t17203H Brassica oleracea HOM05D002170 ORTHO05D007478 4.7e-45 186.4 272 38.6
C03p49210 Brassica napus HOM05D002170 ORTHO05D007478 3.0e-39 167.2 359 31.2
Oeu016182.1 Olea europaea HOM05D002170 ORTHO05D007478 5.1e-39 166.4 275 38.2
Potri.012G043300 Populus trichocarpa HOM05D002170 ORTHO05D007478 1.1e-33 148.7 244 36.5
SGA_v2.0_scaffold40G15643 Striga asiatica HOM05D002170 ORTHO05D007478 4.4e-19 100.1 132 38.6
SGA_v2.0_scaffold1356G53925 Striga asiatica HOM05D002170 ORTHO05D007478 1.1e-17 95.5 132 40.2
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 3.2e-17 94.0 255 29.0
Solyc02g044040.3 Solanum lycopersicum HOM05D002170 ORTHO05D390875 5.1e-15 86.7 78 47.4
Psat3g071120 Pisum sativum HOM05D002170 ORTHO05D327785 4.2e-09 67.0 123 33.3
Ca_22557_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148971 3.5e-08 63.9 55 54.5


User provided reference genes

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