Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26386 Corylus avellana HOM05D000006 ORTHO05D004030 8.2e-207 723.4 344 100.0
Haze_26200 Corylus avellana HOM05D000006 ORTHO05D004030 5.2e-76 288.9 276 51.1
Cfa027305 Carpinus fangiana HOM05D000006 ORTHO05D004030 7.0e-73 278.5 312 47.4
Haze_27167 Corylus avellana HOM05D000006 ORTHO05D004030 3.5e-72 276.2 277 49.5
Mapoly0014s0220 Marchantia polymorpha HOM05D000006 ORTHO05D004030 1.0e-71 274.6 297 46.5
CBR_g17677 Chara braunii HOM05D000006 ORTHO05D004030 1.6e-69 267.3 297 45.8
Cre13.g587150 Chlamydomonas reinhardtii HOM05D000006 ORTHO05D004030 6.1e-69 265.4 282 46.5
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 1.0e-68 264.6 299 46.2
Sc01g0001570 Simmondsia chinensis HOM05D000006 ORTHO05D004030 8.9e-68 261.5 309 44.3
Hund16820 Selenicereus undatus HOM05D000006 ORTHO05D004030 1.5e-67 260.8 317 44.2
Mapoly0014s0119 Marchantia polymorpha HOM05D000006 ORTHO05D004030 2.0e-67 260.4 297 45.8
Sc23g0000920 Simmondsia chinensis HOM05D000006 ORTHO05D004030 2.6e-67 260.0 309 44.3
CiPaw.05G229200 Carya illinoinensis HOM05D000006 ORTHO05D004030 3.4e-67 259.6 309 44.0
ATR0564G159 Amborella trichopoda HOM05D000006 ORTHO05D004030 4.4e-67 259.2 309 43.7
AT5G09740 Arabidopsis thaliana HOM05D000006 ORTHO05D004030 4.4e-67 259.2 309 43.7
Sed0027470 Sechium edule HOM05D000006 ORTHO05D004030 4.4e-67 259.2 309 44.0
unitig_21.g20189 Utricularia gibba HOM05D000006 ORTHO05D004030 4.4e-67 259.2 309 44.0
Os07g0626600 Oryza sativa ssp. japonica HOM05D000006 ORTHO05D004030 5.7e-67 258.8 297 46.5
THA.LOC104819319 Tarenaya hassleriana HOM05D000006 ORTHO05D004030 5.7e-67 258.8 309 43.7
Zm00001eb328000 Zea mays HOM05D000006 ORTHO05D004030 5.7e-67 258.8 297 46.5
Eucgr.F04379 Eucalyptus grandis HOM05D000006 ORTHO05D004030 7.5e-67 258.5 309 44.0
SMO351G0268 Selaginella moellendorffii HOM05D000006 ORTHO05D004030 9.8e-67 258.1 277 45.8
AL8G42020 Arabidopsis lyrata HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.4
AT5G64610 Arabidopsis thaliana HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.4
EL10Ac1g00041 Beta vulgaris HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.4
Carub.0008s2540 Capsella rubella HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.4
CARHR278580 Cardamine hirsuta HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.4
Thhalv10004220m.g Eutrema salsugineum HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.4
SalBow6G6076 Salvia bowleyana HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.7
Solyc11g013520.3 Solanum lycopersicum HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.7
Sopen11g008540 Solanum pennellii HOM05D000006 ORTHO05D004030 1.3e-66 257.7 309 43.7
Actinidia23042 Actinidia chinensis HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
Aa31LG3G17360 Aethionema arabicum HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
AL6G20140 Arabidopsis lyrata HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
BcaB08g37162 Brassica carinata HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
BcaB08g37191 Brassica carinata HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
A10p27700 Brassica napus HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
C09p67790 Brassica napus HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
BolC9t59541H Brassica oleracea HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
BraA10t44822Z Brassica rapa HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
Cfa015957 Carpinus fangiana HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
CiPaw.06G024600 Carya illinoinensis HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
COL.COLO4_21821 Corchorus olitorius HOM05D000006 ORTHO05D004030 1.7e-66 257.3 297 45.8
MELO3C022788.2 Cucumis melo HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
CsaV3_5G023540 Cucumis sativus L. HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
Dinv26721 Davidia involucrata HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 44.0
Thhalv10013550m.g Eutrema salsugineum HOM05D000006 ORTHO05D004030 1.7e-66 257.3 309 43.7
Haze_00526 Corylus avellana HOM05D000006 ORTHO05D004030 2.2e-66 256.9 309 43.7
Potri.002G089500 Populus trichocarpa HOM05D000006 ORTHO05D004030 2.2e-66 256.9 309 43.4
PGR142G3648 Punica granatum HOM05D000006 ORTHO05D004030 2.2e-66 256.9 309 43.4
arahy.Tifrunner.gnm1.ann1.6W1W5K Arachis hypogaea HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.7
arahy.Tifrunner.gnm1.ann1.B54JNT Arachis hypogaea HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.7
MSTRG.22428 Avicennia marina HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.4
BcaB04g19978 Brassica carinata HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.0
Ciclev10001133m.g Citrus clementina HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.7
DCAR_014281 Daucus carota HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 44.0
Glyma.04G130300 Glycine max HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.7
Glyma.06G316400 Glycine max HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.7
Lj3g0019564 Lotus japonicus HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.7
Nitab4.5_0000051g0130 Nicotiana tabacum HOM05D000006 ORTHO05D004030 2.9e-66 256.5 296 45.6
Nitab4.5_0002496g0060 Nicotiana tabacum HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.7
Sp2g27670 Schrenkiella parvula HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.0
SEGI_25942 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.9e-66 256.5 329 42.2
THA.LOC104799527 Tarenaya hassleriana HOM05D000006 ORTHO05D004030 2.9e-66 256.5 309 43.7
BcaC04g23307 Brassica carinata HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.0
A09p08740 Brassica napus HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.0
C09p09880 Brassica napus HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.0
BolC9t53896H Brassica oleracea HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.0
BraA09t36523Z Brassica rapa HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.0
Dinv27386 Davidia involucrata HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.4
Medtr3g007710 Medicago truncatula HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.7
QL05p058776 Quercus lobata HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.7
Sabra05G0129200 Salix brachista HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.4
Thecc.08G116400 Theobroma cacao HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.7
TPR.G12257 Trifolium pratense HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.7
GSVIVG01008945001 Vitis vinifera HOM05D000006 ORTHO05D004030 3.7e-66 256.1 309 43.7
Atru.chr13.1315 Acer truncatum HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
Atru.chr13.1359 Acer truncatum HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
Aa31LG1G17340 Aethionema arabicum HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 42.7
Cc04_g08910 Coffea canephora HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.7
Gohir.A05G231900 Gossypium hirsutum HOM05D000006 ORTHO05D004030 4.9e-66 255.8 297 45.8
Gohir.D05G234200 Gossypium hirsutum HOM05D000006 ORTHO05D004030 4.9e-66 255.8 297 45.8
Gohir.D06G041700 Gossypium hirsutum HOM05D000006 ORTHO05D004030 4.9e-66 255.8 297 45.8
Gorai.009G242400 Gossypium raimondii HOM05D000006 ORTHO05D004030 4.9e-66 255.8 297 45.8
Gorai.010G046900 Gossypium raimondii HOM05D000006 ORTHO05D004030 4.9e-66 255.8 297 45.8
Lalb_Chr18g0049021 Lupinus albus HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
MD08G1173300 Malus domestica HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
MD15G1358600 Malus domestica HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
Pp3c4_18030 Physcomitrium patens HOM05D000006 ORTHO05D004030 4.9e-66 255.8 297 44.8
Potri.005G171700 Populus trichocarpa HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
Prupe.1G506200 Prunus persica HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
TAR381G0924 Trochodendron aralioides HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
TAR625G0616 Trochodendron aralioides HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
VMungo1080G1349 Vigna mungo HOM05D000006 ORTHO05D004030 4.9e-66 255.8 309 43.4
Phvul.005G010700 Phaseolus vulgaris HOM05D000006 ORTHO05D004030 6.4e-66 255.4 309 43.4
Phvul.005G011500 Phaseolus vulgaris HOM05D000006 ORTHO05D004030 6.4e-66 255.4 309 43.4
HPP92_004738 Vanilla planifolia HOM05D000006 ORTHO05D004030 6.4e-66 255.4 309 43.7
Aqoxy5G01525 Aquilegia oxysepala HOM05D000006 ORTHO05D004030 8.3e-66 255.0 297 45.8
CANSAT56G0745 Cannabis sativa HOM05D000006 ORTHO05D004030 8.3e-66 255.0 297 45.8
Actinidia03495 Actinidia chinensis HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.0
MSTRG.24147 Avicennia marina HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.4
CSS0012091 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.4
Migut.N03322 Erythranthe guttata HOM05D000006 ORTHO05D004030 1.1e-65 254.6 297 45.1
FvH4_5g38850 Fragaria vesca HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.0
FAN04G0021 Fragaria x ananassa HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.0
FAN13G0359 Fragaria x ananassa HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.0
FAN18G2681 Fragaria x ananassa HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.0
Lsat_1_v5_gn_1_12240 Lactuca sativa HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.7
Nn1g05200 Nelumbo nucifera HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 42.7
Oeu001989.1 Olea europaea HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.0
PSO210G6583 Papaver somniferum HOM05D000006 ORTHO05D004030 1.1e-65 254.6 309 43.4
Ca_14036_v3 Cicer arietinum L. HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 43.4
FAN08G2703 Fragaria x ananassa HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 43.0
HanXRQChr02g0044231 Helianthus annuus HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 43.7
PSO447G0296 Papaver somniferum HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 43.4
Psat5g230080 Pisum sativum HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 43.4
SalBow7G0198 Salvia bowleyana HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 43.4
SalBow7G3631 Salvia bowleyana HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 43.4
Sp6g33660 Schrenkiella parvula HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 43.0
TWI79G1190 Tripterygium wilfordii HOM05D000006 ORTHO05D004030 1.4e-65 254.2 309 42.7
Lj4A550G32 Lonicera japonica HOM05D000006 ORTHO05D004030 1.8e-65 253.8 309 43.4
Lj4A578G72 Lonicera japonica HOM05D000006 ORTHO05D004030 1.8e-65 253.8 309 43.4
Gohir.A06G040700 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.4e-65 253.4 278 46.8
RcHm_v2.0_Chr7g0240841 Rosa chinensis HOM05D000006 ORTHO05D004030 2.4e-65 253.4 309 43.0
Cfa025466 Carpinus fangiana HOM05D000006 ORTHO05D004030 4.1e-65 252.7 280 45.4
AagrBONN_evm.TU.Sc2ySwM_344.1570 Anthoceros agrestis HOM05D000006 ORTHO05D004030 5.4e-65 252.3 279 45.9
Aqoxy6G00495 Aquilegia oxysepala HOM05D000006 ORTHO05D004030 5.4e-65 252.3 279 45.9
ECA247G3040 Erigeron canadensis HOM05D000006 ORTHO05D000091 5.4e-65 252.3 309 43.4
MCO10G273 Micromonas commoda HOM05D000006 ORTHO05D004030 7.0e-65 251.9 285 43.9
Ah.05g172680 Amaranthus hybridus HOM05D000006 ORTHO05D004030 9.2e-65 251.5 321 42.7
Pp3c2_37980 Physcomitrium patens HOM05D000006 ORTHO05D004030 9.2e-65 251.5 346 39.0
MCO09G855 Micromonas commoda HOM05D000006 ORTHO05D004030 1.2e-64 251.1 284 45.8
AUR62004690 Chenopodium quinoa HOM05D000006 ORTHO05D004030 1.6e-64 250.8 302 45.0
Rhsim11G0065000 Rhododendron simsii HOM05D000006 ORTHO05D004030 7.8e-64 248.4 319 42.0
PRCOL_00006094 Prasinoderma coloniale HOM05D000006 ORTHO05D004030 1.0e-63 248.1 285 43.9
Sabra02G0070500 Salix brachista HOM05D000006 ORTHO05D004030 1.7e-63 247.3 321 41.7
Haze_26687 Corylus avellana HOM05D000006 ORTHO05D004030 6.6e-63 245.4 281 44.5
Peaxi162Scf00360g00314 Petunia axillaris HOM05D000006 ORTHO05D004030 6.6e-63 245.4 324 41.0
MCO10G130 Micromonas commoda HOM05D000006 ORTHO05D004030 8.6e-63 245.0 279 44.1
Cre03.g143907 Chlamydomonas reinhardtii HOM05D000006 ORTHO05D004030 1.1e-62 244.6 275 44.0
CAN.G255.14 Capsicum annuum HOM05D000006 ORTHO05D004030 1.6e-61 240.7 309 42.4
Oeu039581.2 Olea europaea HOM05D000006 ORTHO05D004030 2.1e-61 240.4 330 40.3
PRCOL_00001934 Prasinoderma coloniale HOM05D000006 ORTHO05D004030 2.1e-61 240.4 306 42.2
ClCG03G009080 Citrullus lanatus HOM05D000006 ORTHO05D004030 2.3e-60 236.9 342 39.5
Duzib093G0061 Durio zibethinus HOM05D000006 ORTHO05D004030 7.5e-59 231.9 225 51.6
CARHR203660 Cardamine hirsuta HOM05D000006 ORTHO05D004030 1.9e-57 227.3 260 45.4
SGA_v2.0_scaffold25G11094 Striga asiatica HOM05D000006 ORTHO05D004030 1.9e-57 227.3 373 35.7
vmacro12808 Vaccinium macrocarpon HOM05D000006 ORTHO05D004030 5.4e-57 225.7 367 36.5
AUR62023606 Chenopodium quinoa HOM05D000006 ORTHO05D004030 1.6e-56 224.2 309 39.8
MBI04_g34117_MAGBIO Magnolia biondii HOM05D000006 ORTHO05D004030 4.6e-56 222.6 309 39.8
Lj7C307G3 Lonicera japonica HOM05D000006 ORTHO05D004030 7.8e-56 221.9 309 39.8
Duzib116G0798 Durio zibethinus HOM05D000006 ORTHO05D004030 1.0e-55 221.5 297 41.8
CAN.G222.83 Capsicum annuum HOM05D000006 ORTHO05D004030 3.9e-55 219.5 220 49.5
SEGI_33287 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.1e-53 213.8 206 51.5
Cpa.g.sc42.141 Carica papaya HOM05D000006 ORTHO05D004030 4.4e-51 206.1 242 45.5
Nn5g28927 Nelumbo nucifera HOM05D000006 ORTHO05D004030 4.1e-49 199.5 231 45.9
Manes.18G072700 Manihot esculenta HOM05D000006 ORTHO05D004030 7.1e-49 198.7 231 45.5
TAR628G0303 Trochodendron aralioides HOM05D000006 ORTHO05D004030 3.3e-46 189.9 195 48.7
CDE02G1825 Ceratophyllum demersum HOM05D000006 ORTHO05D004030 4.7e-45 186.0 202 47.0
PSO541G6025 Papaver somniferum HOM05D000006 ORTHO05D004030 2.8e-37 160.2 258 35.7
PSO675G4731 Papaver somniferum HOM05D000006 ORTHO05D004030 2.8e-37 160.2 258 35.7
SGA_v2.0_scaffold28G12032 Striga asiatica HOM05D000006 ORTHO05D004030 7.6e-35 152.1 251 36.7
Gorai.011G166000 Gossypium raimondii HOM05D000006 ORTHO05D004030 2.2e-34 150.6 207 41.1
SEGI_24978 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 6.0e-32 142.5 179 39.1
CAN.G1733.7 Capsicum annuum HOM05D000006 ORTHO05D004030 2.5e-30 137.1 166 44.0
SEGI_04115 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 4.3e-30 136.3 130 51.5
CAN.G959.48 Capsicum annuum HOM05D000006 ORTHO05D004030 6.9e-28 129.0 129 51.9
PSO210G6350 Papaver somniferum HOM05D000006 ORTHO05D004030 1.6e-21 107.8 261 31.0
Cfa026876 Carpinus fangiana HOM05D000006 ORTHO05D004030 6.2e-21 105.9 156 36.5
BcaC01g02690 Brassica carinata HOM05D000006 ORTHO05D004030 1.2e-19 101.7 162 38.3
arahy.Tifrunner.gnm1.ann1.10Y5RS Arachis hypogaea HOM05D000006 ORTHO05D004030 9.9e-19 98.6 171 33.3
FAN25G2177 Fragaria x ananassa HOM05D000006 ORTHO05D004030 1.6e-16 91.3 86 53.5
Zm00001eb109790 Zea mays HOM05D000006 ORTHO05D004030 1.3e-13 81.6 81 49.4
A06p31330 Brassica napus HOM05D000006 ORTHO05D004030 3.7e-13 80.1 113 42.5
arahy.Tifrunner.gnm1.ann1.B34789 Arachis hypogaea HOM05D000006 ORTHO05D004030 4.0e-12 76.6 198 30.8
SEGI_16294 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.6e-11 73.9 75 42.7
TAR376G0202 Trochodendron aralioides HOM05D000006 ORTHO05D004030 4.5e-11 73.2 62 50.0
Gohir.D04G003466 Gossypium hirsutum HOM05D000006 ORTHO05D004030 5.8e-11 72.8 114 35.1
arahy.Tifrunner.gnm1.ann1.KN38JA Arachis hypogaea HOM05D000006 ORTHO05D004030 1.0e-10 72.0 54 64.8
Gorai.012G004600 Gossypium raimondii HOM05D000006 ORTHO05D004030 1.0e-10 72.0 114 35.1
arahy.Tifrunner.gnm1.ann1.D5YD9F Arachis hypogaea HOM05D000006 ORTHO05D004030 4.6e-08 63.2 114 31.6
CAN.G523.61 Capsicum annuum HOM05D001058 ORTHO05D000911 3.9e-07 60.1 130 33.8


User provided reference genes

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