Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26135 Corylus avellana HOM05D003404 ORTHO05D004052 0.0e+00 2397.1 1254 100.0
HanXRQChr04g0110261 Helianthus annuus HOM05D003404 ORTHO05D004052 6.8e-251 871.7 1254 40.6
ECA236G3319 Erigeron canadensis HOM05D003404 ORTHO05D004052 2.2e-249 866.7 1253 41.0
Nitab4.5_0003247g0080 Nicotiana tabacum HOM05D003404 ORTHO05D004052 1.1e-245 854.4 1261 41.0
Sopen01g045420 Solanum pennellii HOM05D003404 ORTHO05D004052 1.6e-244 850.5 1237 40.3
HanXRQChr15g0469691 Helianthus annuus HOM05D003404 ORTHO05D004052 2.1e-244 850.1 1253 40.1
MELO3C016463.2 Cucumis melo HOM05D003404 ORTHO05D004052 3.6e-244 849.4 1251 40.0
CsaV3_3G006660 Cucumis sativus L. HOM05D003404 ORTHO05D004052 2.4e-243 846.7 1251 39.9
Sc12g0008780 Simmondsia chinensis HOM05D003404 ORTHO05D004052 4.0e-243 845.9 1251 39.6
Pp3c8_3260 Physcomitrium patens HOM05D003404 ORTHO05D004052 1.5e-242 844.0 1268 40.7
Solyc01g103010.4 Solanum lycopersicum HOM05D003404 ORTHO05D004052 1.5e-242 844.0 1237 40.2
Sed0011322 Sechium edule HOM05D003404 ORTHO05D004052 2.0e-242 843.6 1251 39.6
Atru.chr6.225 Acer truncatum HOM05D003404 ORTHO05D004052 4.4e-242 842.4 1253 40.3
arahy.Tifrunner.gnm1.ann1.TT7XH0 Arachis hypogaea HOM05D003404 ORTHO05D004052 5.8e-242 842.0 1257 39.5
Ciclev10000063m.g Citrus clementina HOM05D003404 ORTHO05D004052 7.6e-242 841.6 1253 40.3
Gohir.A06G144600 Gossypium hirsutum HOM05D003404 ORTHO05D004052 1.7e-241 840.5 1249 41.0
MD01G1232300 Malus domestica HOM05D003404 ORTHO05D004052 4.9e-241 839.0 1253 40.7
arahy.Tifrunner.gnm1.ann1.F0HWYS Arachis hypogaea HOM05D003404 ORTHO05D004052 6.4e-241 838.6 1257 39.4
CAN.G855.55 Capsicum annuum HOM05D003404 ORTHO05D004052 6.4e-241 838.6 1251 39.9
Actinidia26195 Actinidia chinensis HOM05D003404 ORTHO05D004052 1.1e-240 837.8 1258 40.0
Prupe.2G322700 Prunus persica HOM05D003404 ORTHO05D004052 1.1e-240 837.8 1250 39.9
CSS0015679 Camellia sinensis var. sinensis HOM05D003404 ORTHO05D004052 1.9e-240 837.0 1252 39.9
Pp3c4_6460 Physcomitrium patens HOM05D003404 ORTHO05D004052 1.9e-240 837.0 1266 40.6
Gohir.D06G150300 Gossypium hirsutum HOM05D003404 ORTHO05D004052 5.4e-240 835.5 1249 40.9
TWI59G0557 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 7.1e-240 835.1 1253 40.1
SMO364G0878 Selaginella moellendorffii HOM05D003404 ORTHO05D004052 1.2e-239 834.3 1263 40.0
Aqoxy5G01845 Aquilegia oxysepala HOM05D003404 ORTHO05D004052 2.7e-239 833.2 1262 39.8
Cfa004441 Carpinus fangiana HOM05D003404 ORTHO05D004052 2.7e-239 833.2 1251 39.7
TWI14G1077 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 4.6e-239 832.4 1253 39.7
CANSAT21G0984 Cannabis sativa HOM05D003404 ORTHO05D004052 7.8e-239 831.6 1247 39.6
Thecc.06G019500 Theobroma cacao HOM05D003404 ORTHO05D004052 3.0e-238 829.7 1252 40.2
Cc02_g23620 Coffea canephora HOM05D003404 ORTHO05D004052 5.1e-238 828.9 1278 38.8
Migut.B00720 Erythranthe guttata HOM05D003404 ORTHO05D004052 5.1e-238 828.9 1250 39.9
Peaxi162Scf00011g01927 Petunia axillaris HOM05D003404 ORTHO05D004052 5.1e-238 828.9 1248 39.9
GSVIVG01023143001 Vitis vinifera HOM05D003404 ORTHO05D004052 5.1e-238 828.9 1279 39.2
Medtr4g134620 Medicago truncatula HOM05D003404 ORTHO05D004052 8.7e-238 828.2 1255 40.2
MD07G1304100 Malus domestica HOM05D003404 ORTHO05D004052 1.9e-237 827.0 1251 40.0
TPR.G6014 Trifolium pratense HOM05D003404 ORTHO05D004052 2.5e-237 826.6 1252 39.7
Duzib235G1119 Durio zibethinus HOM05D003404 ORTHO05D004052 3.3e-237 826.2 1251 40.1
Gorai.010G175500 Gossypium raimondii HOM05D003404 ORTHO05D004052 4.3e-237 825.9 1277 40.0
Os02g0167700 Oryza sativa ssp. japonica HOM05D003404 ORTHO05D004052 4.3e-237 825.9 1256 40.0
Phvul.003G076300 Phaseolus vulgaris HOM05D003404 ORTHO05D004052 4.3e-237 825.9 1252 39.8
Manes.07G030800 Manihot esculenta HOM05D003404 ORTHO05D004052 7.3e-237 825.1 1252 39.5
MSTRG.16466 Avicennia marina HOM05D003404 ORTHO05D004052 9.6e-237 824.7 1253 39.9
PGR042G3714 Punica granatum HOM05D003404 ORTHO05D004052 9.6e-237 824.7 1252 39.5
VMungo1215G2990 Vigna mungo HOM05D003404 ORTHO05D004052 1.6e-236 823.9 1252 39.7
Nn5g27178 Nelumbo nucifera HOM05D003404 ORTHO05D004052 4.7e-236 822.4 1261 39.5
Glyma.17G002000 Glycine max HOM05D003404 ORTHO05D004052 1.1e-235 821.2 1252 39.6
Lalb_Chr18g0061171 Lupinus albus HOM05D003404 ORTHO05D004052 3.1e-235 819.7 1254 39.4
AagrBONN_evm.TU.Sc2ySwM_228.3869 Anthoceros agrestis HOM05D003404 ORTHO05D004052 5.2e-235 818.9 1258 40.1
CiPaw.05G001400 Carya illinoinensis HOM05D003404 ORTHO05D004052 5.2e-235 818.9 1251 39.6
Lj4g0008829 Lotus japonicus HOM05D003404 ORTHO05D004052 5.2e-235 818.9 1252 39.1
Psat4g002640 Pisum sativum HOM05D003404 ORTHO05D004052 5.2e-235 818.9 1254 40.2
Duzib192G0569 Durio zibethinus HOM05D003404 ORTHO05D004052 9.0e-235 818.1 1254 40.3
QL02p103380 Quercus lobata HOM05D003404 ORTHO05D004052 1.2e-234 817.8 1209 40.1
Mapoly0029s0003 Marchantia polymorpha HOM05D003404 ORTHO05D004052 1.5e-234 817.4 1247 39.7
Potri.004G229300 Populus trichocarpa HOM05D003404 ORTHO05D004052 1.5e-234 817.4 1251 39.6
Glyma.07G272400 Glycine max HOM05D003404 ORTHO05D004052 2.6e-234 816.6 1220 40.6
Potri.003G000500 Populus trichocarpa HOM05D003404 ORTHO05D004052 5.8e-234 815.5 1250 39.5
TAR376G0925 Trochodendron aralioides HOM05D003404 ORTHO05D004052 7.6e-234 815.1 1252 39.3
Lalb_Chr15g0090861 Lupinus albus HOM05D003404 ORTHO05D004052 2.2e-233 813.5 1253 39.4
PSO210G7577 Papaver somniferum HOM05D003404 ORTHO05D004052 6.4e-233 812.0 1256 39.4
FvH4_7g33400 Fragaria vesca HOM05D003404 ORTHO05D004052 1.4e-232 810.8 1252 39.0
SGA_v2.0_scaffold254G45235 Striga asiatica HOM05D003404 ORTHO05D004052 1.4e-232 810.8 1294 38.6
RcHm_v2.0_Chr1g0383371 Rosa chinensis HOM05D003404 ORTHO05D004052 1.9e-232 810.4 1251 38.9
HPP92_001482 Vanilla planifolia HOM05D003404 ORTHO05D004052 3.2e-232 809.7 1248 39.1
EL10Ac6g13982 Beta vulgaris HOM05D003404 ORTHO05D004052 4.2e-232 809.3 1255 39.0
Lsat_1_v5_gn_9_83361 Lactuca sativa HOM05D003404 ORTHO05D004052 9.3e-232 808.1 1239 39.2
THA.LOC104801780 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 7.8e-231 805.1 1257 38.4
Zm00001eb207390 Zea mays HOM05D003404 ORTHO05D004052 2.3e-230 803.5 1249 39.6
THA.LOC104805135 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 1.1e-229 801.2 1255 38.4
BolC7t43839H Brassica oleracea HOM05D003404 ORTHO05D004052 1.9e-229 800.4 1262 38.0
PSO761G0035 Papaver somniferum HOM05D003404 ORTHO05D004052 4.3e-229 799.3 1271 38.8
Ca_13528_v3 Cicer arietinum L. HOM05D003404 ORTHO05D004052 5.6e-229 798.9 1318 38.2
CARHR145090 Cardamine hirsuta HOM05D003404 ORTHO05D004052 1.6e-228 797.3 1254 38.4
ClCG10G007400 Citrullus lanatus HOM05D003404 ORTHO05D004052 3.6e-228 796.2 1235 39.0
BolC2t11162H Brassica oleracea HOM05D003404 ORTHO05D004052 6.2e-228 795.4 1261 38.1
BraA06t27242Z Brassica rapa HOM05D003404 ORTHO05D004052 6.2e-228 795.4 1255 38.0
unitig_27.g24934 Utricularia gibba HOM05D003404 ORTHO05D004052 1.1e-227 794.7 1257 38.6
C02p50810 Brassica napus HOM05D003404 ORTHO05D004052 1.8e-227 793.9 1261 38.1
C07p33270 Brassica napus HOM05D003404 ORTHO05D004052 3.1e-227 793.1 1265 38.0
DCAR_001727 Daucus carota HOM05D003404 ORTHO05D004052 9.0e-227 791.6 1250 39.0
Thhalv10003535m.g Eutrema salsugineum HOM05D003404 ORTHO05D004052 9.0e-227 791.6 1256 38.5
A06p43570 Brassica napus HOM05D003404 ORTHO05D004052 2.6e-226 790.0 1244 38.2
BcaC03g17156 Brassica carinata HOM05D003404 ORTHO05D004052 4.5e-226 789.3 1255 38.0
BraA02t08325Z Brassica rapa HOM05D003404 ORTHO05D004052 5.8e-226 788.9 1255 38.0
Carub.0005s0156 Capsella rubella HOM05D003404 ORTHO05D004052 1.7e-225 787.3 1255 38.0
AL5G11830 Arabidopsis lyrata HOM05D003404 ORTHO05D004052 2.9e-225 786.6 1223 38.9
Sp2g13790 Schrenkiella parvula HOM05D003404 ORTHO05D004052 3.8e-225 786.2 1254 37.4
AT2G02560 Arabidopsis thaliana HOM05D003404 ORTHO05D004052 1.9e-224 783.9 1223 38.8
Dinv29635 Davidia involucrata HOM05D003404 ORTHO05D004052 2.4e-224 783.5 1174 40.1
BcaB07g30328 Brassica carinata HOM05D003404 ORTHO05D004052 5.4e-224 782.3 1255 37.8
Eucgr.G00074 Eucalyptus grandis HOM05D003404 ORTHO05D004052 5.4e-224 782.3 1198 39.9
A02p33040 Brassica napus HOM05D003404 ORTHO05D004052 9.3e-224 781.6 1243 38.1
Aa31LG2G7580 Aethionema arabicum HOM05D003404 ORTHO05D004052 3.5e-223 779.6 1261 38.0
Sabra03G0000100 Salix brachista HOM05D003404 ORTHO05D004052 3.0e-222 776.5 1317 37.5
Rhsim05G0115300 Rhododendron simsii HOM05D003404 ORTHO05D004052 9.6e-221 771.5 1411 35.9
MBI06_g16624_MAGBIO Magnolia biondii HOM05D003404 ORTHO05D004052 5.8e-218 762.3 1299 37.6
Dinv29680 Davidia involucrata HOM05D003404 ORTHO05D004052 2.9e-217 760.0 1164 39.5
COL.COLO4_31122 Corchorus olitorius HOM05D003404 ORTHO05D004052 1.0e-214 751.5 1243 38.3
Lj5C285G4 Lonicera japonica HOM05D003404 ORTHO05D004052 2.3e-214 750.4 1250 37.6
vmacro19829 Vaccinium macrocarpon HOM05D003404 ORTHO05D004052 8.7e-214 748.4 1314 37.0
FAN01G2685 Fragaria x ananassa HOM05D003404 ORTHO05D004052 5.3e-211 739.2 1249 37.0
Haze_09982 Corylus avellana HOM05D003404 ORTHO05D004052 6.9e-211 738.8 1251 37.3
AUR62042960 Chenopodium quinoa HOM05D003404 ORTHO05D004052 2.6e-210 736.9 1249 37.1
Ah.03g136760 Amaranthus hybridus HOM05D003404 ORTHO05D004052 1.3e-209 734.6 1159 39.4
CDE05G1207 Ceratophyllum demersum HOM05D003404 ORTHO05D004052 7.1e-208 728.8 1251 36.9
FAN03G0122 Fragaria x ananassa HOM05D003404 ORTHO05D004052 2.1e-207 727.2 1232 36.9
AUR62043067 Chenopodium quinoa HOM05D003404 ORTHO05D004052 2.8e-204 716.8 1235 36.7
SHI05020 Sapria himalayana HOM05D003404 ORTHO05D004052 3.2e-192 676.8 1243 36.0
BcaC06g31225 Brassica carinata HOM05D003404 ORTHO05D004052 6.7e-182 642.5 930 40.9
CBR_g18772 Chara braunii HOM05D003404 ORTHO05D004052 1.3e-177 628.2 1246 34.8
Sabra01G0174500 Salix brachista HOM05D003404 ORTHO05D004052 9.4e-176 622.1 1095 36.3
ATR1089G109 Amborella trichopoda HOM05D003404 ORTHO05D004052 4.1e-171 606.7 850 41.9
Cre03.g177053 Chlamydomonas reinhardtii HOM05D003404 ORTHO05D004052 4.5e-154 550.1 1368 32.2
Nitab4.5_0007689g0020 Nicotiana tabacum HOM05D003404 ORTHO05D004052 4.0e-142 510.4 908 37.4
MCO07G702 Micromonas commoda HOM05D003404 ORTHO05D004052 1.4e-134 485.3 1295 30.3
PRCOL_00003487 Prasinoderma coloniale HOM05D003404 ORTHO05D004052 9.9e-133 479.2 1274 29.4
BcaC06g31227 Brassica carinata HOM05D003404 ORTHO05D004052 2.2e-116 424.9 744 35.9
Cfa023835 Carpinus fangiana HOM05D003404 ORTHO05D004052 2.5e-83 315.1 1334 26.2
Cpa.g.sc173.13 Carica papaya HOM05D003404 ORTHO05D004052 1.3e-76 292.7 331 46.2
Oeu028474.1 Olea europaea HOM05D003404 ORTHO05D004052 7.7e-69 266.9 450 37.8
arahy.Tifrunner.gnm1.ann1.4Z0G7J Arachis hypogaea HOM05D003404 ORTHO05D004052 2.1e-58 232.3 409 35.5
Oeu028473.1 Olea europaea HOM05D003404 ORTHO05D004052 5.7e-56 224.2 373 36.7
arahy.Tifrunner.gnm1.ann1.GG9Z8N Arachis hypogaea HOM05D003404 ORTHO05D004052 1.2e-53 216.5 364 35.2
ATR1089G005 Amborella trichopoda HOM05D003404 ORTHO05D004052 5.0e-52 211.1 384 33.9
Sabra01G0174400 Salix brachista HOM05D003404 ORTHO05D004052 1.8e-46 192.6 199 48.7
MBI06_g14248_MAGBIO Magnolia biondii HOM05D003404 ORTHO05D004052 1.2e-45 189.9 386 32.1
Lsat_1_v5_gn_2_40780 Lactuca sativa HOM05D003404 ORTHO05D004052 4.5e-45 188.0 280 37.1
Actinidia01636 Actinidia chinensis HOM05D003404 ORTHO05D004052 1.0e-44 186.8 231 42.0
SEGI_11687 Sequoiadendron giganteum HOM05D003404 ORTHO05D000003 8.6e-36 157.1 181 49.2
HPP92_028449 Vanilla planifolia HOM05D003404 ORTHO05D004052 7.3e-35 154.1 197 43.1
Os02g0169800 Oryza sativa ssp. japonica HOM05D003404 ORTHO05D004052 1.2e-34 153.3 314 32.2
Zm00001eb006600 Zea mays HOM05D003404 ORTHO05D004052 5.2e-33 147.9 189 44.4
arahy.Tifrunner.gnm1.ann1.I4H71T Arachis hypogaea HOM05D003404 ORTHO05D004052 1.9e-30 139.4 227 37.0
BcaC06g31226 Brassica carinata HOM05D003404 ORTHO05D004052 1.3e-28 133.3 291 29.2
Thecc.06G018800 Theobroma cacao HOM05D003404 ORTHO05D004052 1.7e-28 132.9 114 52.6
QL09p011372 Quercus lobata HOM05D003404 ORTHO05D004052 5.0e-28 131.3 266 36.5
Zm00001eb178910 Zea mays HOM05D003404 ORTHO05D004052 1.1e-27 130.2 198 37.9
FAN10G3720 Fragaria x ananassa HOM05D003404 ORTHO05D004052 4.3e-27 128.3 200 35.5
FAN10G0829 Fragaria x ananassa HOM05D003404 ORTHO05D004052 5.6e-27 127.9 200 35.5
Actinidia01637 Actinidia chinensis HOM05D003404 ORTHO05D004052 1.2e-26 126.7 167 41.9
Cfa002344 Carpinus fangiana HOM05D000705 ORTHO05D004052 1.2e-26 126.7 127 51.2
Lsat_1_v5_gn_8_147900 Lactuca sativa HOM05D003404 ORTHO05D004052 1.6e-26 126.3 209 34.9
BcaC06g34049 Brassica carinata HOM05D003404 ORTHO05D004052 5.4e-22 111.3 202 30.2
Lsat_1_v5_gn_7_61421 Lactuca sativa HOM05D003404 ORTHO05D004052 5.1e-20 104.8 76 60.5
arahy.Tifrunner.gnm1.ann1.7AK1LE Arachis hypogaea HOM05D003404 ORTHO05D004052 6.2e-18 97.8 184 34.8
Lsat_1_v5_gn_3_57841 Lactuca sativa HOM05D003404 ORTHO05D004052 1.1e-17 97.1 185 33.0
SEGI_37814 Sequoiadendron giganteum HOM05D003404 ORTHO05D004052 1.1e-17 97.1 204 30.9
Lsat_1_v5_gn_8_101580 Lactuca sativa HOM05D001355 ORTHO05D004052 5.2e-17 94.7 127 38.6
Lsat_1_v5_gn_4_49821 Lactuca sativa HOM05D003404 ORTHO05D004052 4.4e-16 91.7 117 43.6
Lsat_1_v5_gn_3_80641 Lactuca sativa HOM05D003404 ORTHO05D004052 1.1e-14 87.0 124 40.3
Gohir.A11G223200 Gossypium hirsutum HOM05D003404 ORTHO05D004052 1.4e-14 86.7 100 45.0
AagrBONN_evm.TU.Sc2ySwM_117.1502 Anthoceros agrestis HOM05D003404 ORTHO05D016498 2.4e-14 85.9 91 42.9
arahy.Tifrunner.gnm1.ann1.04V0U4 Arachis hypogaea HOM05D003404 ORTHO05D004052 3.5e-13 82.0 80 50.0
arahy.Tifrunner.gnm1.ann1.UB9Q96 Arachis hypogaea HOM05D003404 ORTHO05D004052 3.5e-13 82.0 80 50.0
arahy.Tifrunner.gnm1.ann1.L2Q8ZF Arachis hypogaea HOM05D003404 ORTHO05D004052 6.0e-13 81.3 81 49.4
TPR.G18134 Trifolium pratense HOM05D003404 ORTHO05D004052 5.6e-11 74.7 85 50.6
arahy.Tifrunner.gnm1.ann1.XY3U73 Arachis hypogaea HOM05D003404 ORTHO05D004052 2.1e-10 72.8 79 46.8
Hund15376 Selenicereus undatus HOM05D003404 ORTHO05D004052 3.6e-10 72.0 149 30.9
HPP92_001465 Vanilla planifolia HOM05D003404 ORTHO05D004052 1.1e-09 70.5 106 35.8
Hund15388 Selenicereus undatus HOM05D003404 ORTHO05D004052 1.8e-09 69.7 458 24.5
Actinidia01639 Actinidia chinensis HOM05D003404 ORTHO05D004052 6.8e-09 67.8 76 42.1
HPP92_027407 Vanilla planifolia HOM05D003404 ORTHO05D036552 1.7e-07 63.2 111 35.1
Atru.chr8.1282 Acer truncatum HOM05D003404 ORTHO05D004052 8.4e-07 60.8 68 44.1
arahy.Tifrunner.gnm1.ann1.536Q9G Arachis hypogaea HOM05D003404 ORTHO05D004052 1.4e-06 60.1 64 45.3
Prupe.6G174400 Prunus persica HOM05D003404 ORTHO05D004052 1.4e-06 60.1 198 26.8
Lsat_1_v5_gn_6_52600 Lactuca sativa HOM05D003404 ORTHO05D016190 1.9e-06 59.7 113 32.7


User provided reference genes

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