Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 0.0e+00 1594.7 900 100.0
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 0.0e+00 1502.3 923 92.2
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 0.0e+00 1206.0 857 78.4
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 7.0e-290 1000.7 898 64.9
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 4.5e-289 998.0 892 65.1
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 8.5e-288 993.8 957 63.5
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 5.5e-287 991.1 958 61.8
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 1.8e-285 986.1 977 63.3
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 5.2e-285 984.6 965 60.7
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 8.8e-285 983.8 966 61.8
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 6.3e-283 977.6 899 63.4
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 8.3e-283 977.2 969 61.7
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 3.5e-281 971.8 902 63.9
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 1.4e-277 959.9 954 62.1
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.4e-277 959.9 951 62.3
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.8e-277 959.5 951 61.0
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.5e-276 956.4 950 61.9
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 2.6e-276 955.7 901 62.9
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 2.9e-275 952.2 946 61.0
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 1.8e-274 949.5 863 64.5
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.0e-273 946.0 863 63.7
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 2.5e-271 939.1 856 64.4
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 1.8e-269 932.9 894 63.3
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 5.4e-266 921.4 957 62.2
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 1.6e-265 919.8 858 62.5
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 8.6e-264 914.1 859 62.2
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 1.9e-263 912.9 881 62.5
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 5.6e-263 911.4 970 59.4
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 1.6e-262 909.8 861 61.8
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 3.6e-262 908.7 969 59.3
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 1.1e-261 907.1 963 59.6
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 1.4e-261 906.7 876 61.2
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 4.4e-260 901.7 881 60.5
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 3.7e-259 898.7 952 57.0
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 9.2e-258 894.0 859 61.1
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 1.9e-255 886.3 900 60.2
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 2.5e-255 885.9 893 60.0
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 5.6e-255 884.8 953 58.2
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 4.4e-252 875.2 855 59.3
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 5.4e-250 868.2 956 59.3
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 9.2e-250 867.5 953 58.1
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 1.3e-248 863.6 879 60.8
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 2.3e-248 862.8 954 54.7
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 7.3e-247 857.8 946 55.8
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 8.9e-245 850.9 939 55.9
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 8.9e-245 850.9 929 57.4
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 2.6e-244 849.4 946 55.9
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 6.4e-243 844.7 924 57.8
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 8.4e-243 844.3 958 56.9
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 1.9e-242 843.2 958 55.8
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 7.1e-242 841.3 954 54.8
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 6.0e-241 838.2 952 57.4
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 1.0e-240 837.4 947 56.0
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 2.5e-239 832.8 842 60.9
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 4.3e-239 832.0 858 57.9
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 4.3e-239 832.0 902 57.3
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 5.6e-239 831.6 980 55.6
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 8.1e-238 827.8 960 53.6
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 1.2e-236 823.9 952 55.5
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 2.6e-236 822.8 952 52.4
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 2.2e-235 819.7 912 54.3
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 2.7e-233 812.8 867 55.8
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 1.0e-232 810.8 899 55.2
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 2.3e-232 809.7 871 56.1
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 5.1e-232 808.5 947 55.0
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 1.1e-231 807.4 871 57.1
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 2.5e-231 806.2 797 60.2
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 2.5e-231 806.2 903 56.0
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 7.4e-231 804.7 906 54.3
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 9.6e-231 804.3 1020 52.3
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 2.1e-230 803.1 865 56.5
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 4.8e-230 802.0 895 54.5
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 6.2e-230 801.6 896 57.0
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 1.4e-229 800.4 906 53.9
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 4.9e-227 792.0 904 54.6
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 1.6e-225 786.9 931 53.3
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 3.7e-222 775.8 999 51.5
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 1.2e-220 770.8 808 58.4
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 1.1e-218 764.2 858 56.3
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 1.4e-218 763.8 832 55.9
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 1.4e-210 737.3 957 50.1
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 4.6e-209 732.3 934 50.3
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 1.0e-208 731.1 935 50.7
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 5.1e-208 728.8 958 48.3
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 2.8e-206 723.0 878 50.8
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 2.8e-206 723.0 902 51.9
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 3.7e-206 722.6 948 49.4
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 2.4e-205 719.9 862 51.3
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 3.8e-203 712.6 874 52.1
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 1.4e-202 710.7 983 47.7
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 3.6e-201 706.1 950 48.5
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 3.6e-201 706.1 950 48.5
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 8.8e-200 701.4 956 48.3
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 1.5e-199 700.7 881 50.3
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 8.2e-198 694.9 957 48.0
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 1.3e-195 687.6 936 48.4
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 7.9e-193 678.3 936 48.0
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.6e-191 673.3 949 47.1
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 7.4e-191 671.8 853 48.8
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 1.4e-189 667.5 955 47.2
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 2.3e-184 650.2 960 46.1
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 3.0e-184 649.8 871 48.2
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 5.7e-183 645.6 991 44.1
Solyc05g009850.4 Solanum lycopersicum HOM05D004199 ORTHO05D005905 1.0e-179 634.8 616 58.1
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.5e-178 630.9 682 55.4
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 8.3e-174 615.1 940 44.4
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 1.2e-169 601.3 923 44.2
GSVIVG01011956001 Vitis vinifera HOM05D004199 ORTHO05D005905 9.8e-167 591.7 485 65.6
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 8.6e-163 578.6 923 43.4
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 4.7e-161 572.8 865 44.5
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 1.1e-154 551.6 906 42.5
AUR62042759 Chenopodium quinoa HOM05D004199 ORTHO05D005905 1.9e-146 524.2 481 60.1
Oeu041359.1 Olea europaea HOM05D004199 ORTHO05D005905 1.6e-145 521.2 477 60.4
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 1.2e-129 468.4 838 39.6
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 7.6e-111 406.0 458 63.1
Rhsim01G0212500 Rhododendron simsii HOM05D004199 ORTHO05D005905 2.7e-108 397.5 550 46.5
CBR_g46838 Chara braunii HOM05D004199 ORTHO05D005905 1.5e-103 381.7 925 33.8
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 1.5e-90 338.6 394 57.1
Nitab4.5_0007631g0010 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.3e-86 325.5 479 45.1
AT5G09210 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.9e-78 297.7 325 52.0
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 3.6e-76 290.8 486 45.7
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 2.0e-74 285.0 413 50.6
CARHR203800 Cardamine hirsuta HOM05D004199 ORTHO05D005905 8.2e-73 279.6 257 58.4
Glyma.18G205900 Glycine max HOM05D004199 ORTHO05D005905 3.8e-70 270.8 295 53.6
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 7.2e-69 266.5 438 42.2
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 1.6e-68 265.4 396 44.9
Actinidia13676 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.7e-62 245.4 171 71.3
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 9.4e-61 239.6 287 49.8
Actinidia13675 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.2e-60 239.2 451 46.6
MCO14G506 Micromonas commoda HOM05D004199 ORTHO05D005905 1.2e-52 212.6 515 30.9
Cpa.g.sc221.8 Carica papaya HOM05D004199 ORTHO05D005905 1.2e-50 206.1 431 47.3
Cre06.g269350 Chlamydomonas reinhardtii HOM05D004199 ORTHO05D005905 1.2e-47 196.1 603 26.9
EL10Ac6g14565 Beta vulgaris HOM05D004199 ORTHO05D005905 3.2e-40 171.4 157 58.0
Potri.006G020200 Populus trichocarpa HOM05D004199 ORTHO05D005905 3.0e-38 164.9 151 66.2
Potri.006G020400 Populus trichocarpa HOM05D004199 ORTHO05D005905 8.6e-38 163.3 151 66.2
EL10Ac6g13882 Beta vulgaris HOM05D004199 ORTHO05D005905 8.6e-30 136.7 96 65.6
Nitab4.5_0000520g0050 Nicotiana tabacum HOM05D004199 ORTHO05D005905 9.9e-26 123.2 180 43.9
CARHR069330 Cardamine hirsuta HOM05D004199 ORTHO05D005905 5.4e-24 117.5 88 65.9
Thecc.06G064500 Theobroma cacao HOM05D004199 ORTHO05D005905 1.0e-22 113.2 77 70.1
Cpa.g.sc221.6 Carica papaya HOM05D004199 ORTHO05D005905 1.1e-19 103.2 65 76.9
Sabra10G0198200 Salix brachista HOM05D004199 ORTHO05D349944 1.2e-15 89.7 141 47.5
COL.COLO4_28252 Corchorus olitorius HOM05D004199 ORTHO05D025158 2.7e-15 88.6 90 61.1
COL.COLO4_32069 Corchorus olitorius HOM05D004199 ORTHO05D025158 1.3e-14 86.3 90 58.9
CARHR069340 Cardamine hirsuta HOM05D004199 ORTHO05D005905 3.9e-14 84.7 92 51.1
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 2.0e-10 72.4 87 56.3
TPR.G37907 Trifolium pratense HOM05D004199 ORTHO05D411047 2.4e-08 65.5 57 56.1
Aqoxy5G02943 Aquilegia oxysepala HOM05D004199 ORTHO05D077991 1.7e-06 59.3 40 62.5
AagrBONN_evm.TU.Sc2ySwM_368.450 Anthoceros agrestis HOM05D004199 ORTHO05D005905 8.7e-06 57.0 84 34.5


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