Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10375 Corylus avellana HOM05D004256 ORTHO05D005224 1.9e-104 382.5 193 100.0
Haze_10384 Corylus avellana HOM05D004256 ORTHO05D005224 1.1e-72 276.9 291 58.4
Haze_10386 Corylus avellana HOM05D004256 ORTHO05D005224 1.1e-72 276.9 291 58.4
Cfa004790 Carpinus fangiana HOM05D004256 ORTHO05D005224 1.5e-56 223.4 211 60.2
Haze_01153 Corylus avellana HOM05D004256 ORTHO05D005224 9.1e-46 187.6 115 87.8
CiPaw.09G142400 Carya illinoinensis HOM05D004256 ORTHO05D005224 2.9e-44 182.6 222 50.0
Prupe.4G091400 Prunus persica HOM05D004256 ORTHO05D005224 5.2e-41 171.8 219 45.7
MD05G1271600 Malus domestica HOM05D004256 ORTHO05D005224 3.4e-40 169.1 212 46.2
RcHm_v2.0_Chr5g0016471 Rosa chinensis HOM05D004256 ORTHO05D005224 5.7e-40 168.3 244 42.6
QL05p062735 Quercus lobata HOM05D004256 ORTHO05D005224 7.5e-40 167.9 220 47.3
MD10G1252200 Malus domestica HOM05D004256 ORTHO05D005224 9.8e-40 167.5 215 44.7
GSVIVG01021670001 Vitis vinifera HOM05D004256 ORTHO05D005224 4.9e-39 165.2 210 46.2
FvH4_3g10230 Fragaria vesca HOM05D004256 ORTHO05D005224 1.8e-38 163.3 244 42.6
FAN11G3535 Fragaria x ananassa HOM05D004256 ORTHO05D005224 9.1e-38 161.0 244 42.2
FAN16G0878 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.0e-37 159.8 241 42.7
FAN21G3884 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.7e-36 156.8 244 41.8
Dinv16826 Davidia involucrata HOM05D004256 ORTHO05D005224 3.8e-36 155.6 237 41.8
Atru.chr10.795 Acer truncatum HOM05D004256 ORTHO05D005224 2.5e-35 152.9 212 44.8
CSS0013637 Camellia sinensis var. sinensis HOM05D004256 ORTHO05D005224 3.3e-35 152.5 210 42.4
FAN04G0519 Fragaria x ananassa HOM05D004256 ORTHO05D005224 4.2e-35 152.1 242 42.6
Lalb_Chr12g0208801 Lupinus albus HOM05D004256 ORTHO05D005224 4.2e-35 152.1 211 41.2
TWI63G0578 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 7.2e-35 151.4 212 42.9
Ciclev10014179m.g Citrus clementina HOM05D004256 ORTHO05D005224 9.5e-35 151.0 207 45.4
Thecc.06G004200 Theobroma cacao HOM05D004256 ORTHO05D005224 1.2e-34 150.6 209 43.5
FAN18G2742 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.6e-34 150.2 237 41.8
FAN18G3233 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.8e-34 149.4 234 41.9
Sabra16G0315900 Salix brachista HOM05D004256 ORTHO05D005224 2.8e-34 149.4 211 41.7
TWI38G1119 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 2.8e-34 149.4 212 41.5
Haze_10382 Corylus avellana HOM05D004256 ORTHO05D005224 6.1e-34 148.3 216 48.1
TAR627G0580 Trochodendron aralioides HOM05D004256 ORTHO05D005224 1.4e-33 147.1 224 41.1
Glyma.05G126600 Glycine max HOM05D004256 ORTHO05D005224 1.8e-33 146.7 217 40.6
FAN13G2402 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.3e-33 146.4 242 41.7
Glyma.08G081600 Glycine max HOM05D004256 ORTHO05D005224 2.3e-33 146.4 217 41.0
FAN08G1809 Fragaria x ananassa HOM05D004256 ORTHO05D005224 3.0e-33 146.0 234 40.6
Potri.001G465500 Populus trichocarpa HOM05D004256 ORTHO05D005224 3.0e-33 146.0 212 41.0
Lalb_Chr13g0291451 Lupinus albus HOM05D004256 ORTHO05D005224 8.9e-33 144.4 204 41.7
Actinidia31384 Actinidia chinensis HOM05D004256 ORTHO05D005224 1.5e-32 143.7 229 39.3
TPR.G30378 Trifolium pratense HOM05D004256 ORTHO05D005224 3.4e-32 142.5 217 38.7
arahy.Tifrunner.gnm1.ann1.71MGM7 Arachis hypogaea HOM05D004256 ORTHO05D005224 7.5e-32 141.4 224 37.5
Eucgr.L00874 Eucalyptus grandis HOM05D004256 ORTHO05D005224 9.8e-32 141.0 229 38.4
COL.COLO4_26853 Corchorus olitorius HOM05D004256 ORTHO05D005224 1.7e-31 140.2 204 44.1
Eucgr.K01946 Eucalyptus grandis HOM05D004256 ORTHO05D005224 2.2e-31 139.8 243 38.3
Gohir.D06G123900 Gossypium hirsutum HOM05D004256 ORTHO05D005224 2.8e-31 139.4 212 42.0
Sed0001829 Sechium edule HOM05D004256 ORTHO05D005224 2.8e-31 139.4 224 37.9
MELO3C002826.2 Cucumis melo HOM05D004256 ORTHO05D005224 4.9e-31 138.7 224 37.9
Gorai.010G144100 Gossypium raimondii HOM05D004256 ORTHO05D005224 4.9e-31 138.7 212 42.0
Potri.011G163600 Populus trichocarpa HOM05D004256 ORTHO05D005224 4.9e-31 138.7 211 41.7
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 6.3e-31 138.3 224 37.1
Psat7g093560 Pisum sativum HOM05D004256 ORTHO05D005224 8.3e-31 137.9 217 37.8
Sc17g0004590 Simmondsia chinensis HOM05D004256 ORTHO05D005224 8.3e-31 137.9 212 39.2
ClCG03G008210 Citrullus lanatus HOM05D004256 ORTHO05D005224 1.1e-30 137.5 224 38.4
CsaV3_1G037200 Cucumis sativus L. HOM05D004256 ORTHO05D005224 1.1e-30 137.5 224 37.5
Gohir.A06G119600 Gossypium hirsutum HOM05D004256 ORTHO05D005224 1.1e-30 137.5 212 42.0
Phvul.002G198200 Phaseolus vulgaris HOM05D004256 ORTHO05D005224 3.2e-30 136.0 217 39.2
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 4.1e-30 135.6 262 36.6
Peaxi162Scf00670g00215 Petunia axillaris HOM05D004256 ORTHO05D005224 4.1e-30 135.6 212 38.2
Dinv11058 Davidia involucrata HOM05D004256 ORTHO05D005224 7.0e-30 134.8 223 41.3
Medtr4g094545 Medicago truncatula HOM05D004256 ORTHO05D005224 9.2e-30 134.4 217 37.8
Ca_18290_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 1.6e-29 133.7 217 38.7
Manes.06G068000 Manihot esculenta HOM05D004256 ORTHO05D005224 5.9e-29 131.7 211 37.4
Duzib192G0446 Durio zibethinus HOM05D004256 ORTHO05D005224 7.8e-29 131.3 212 41.0
FAN25G0985 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.9e-28 129.4 100 60.0
CANSAT35G1931 Cannabis sativa HOM05D004256 ORTHO05D005224 8.6e-28 127.9 210 36.7
Lj4g0013937 Lotus japonicus HOM05D004256 ORTHO05D005224 1.9e-27 126.7 215 36.7
DCAR_003847 Daucus carota HOM05D004256 ORTHO05D005224 2.5e-27 126.3 211 37.0
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 5.6e-27 125.2 217 36.9
Cc09_g07800 Coffea canephora HOM05D004256 ORTHO05D005224 7.3e-27 124.8 212 36.3
Rhsim02G0162800 Rhododendron simsii HOM05D004256 ORTHO05D005224 7.3e-27 124.8 236 36.0
PGR031G3593 Punica granatum HOM05D004256 ORTHO05D005224 9.5e-27 124.4 225 36.0
Aqoxy5G02462 Aquilegia oxysepala HOM05D004256 ORTHO05D005224 3.6e-26 122.5 222 39.6
ECA236G4703 Erigeron canadensis HOM05D004256 ORTHO05D005224 6.1e-26 121.7 122 49.2
Nn2g15522 Nelumbo nucifera HOM05D004256 ORTHO05D005224 2.3e-25 119.8 109 55.0
Nitab4.5_0001583g0180 Nicotiana tabacum HOM05D004256 ORTHO05D005224 3.1e-25 119.4 179 38.5
Lj1A1161T63 Lonicera japonica HOM05D004256 ORTHO05D005224 5.2e-25 118.6 195 36.4
Oeu014331.2 Olea europaea HOM05D004256 ORTHO05D005224 5.2e-25 118.6 217 35.9
Ah.14g086130 Amaranthus hybridus HOM05D004256 ORTHO05D005224 6.8e-25 118.2 208 35.6
CAN.G79.16 Capsicum annuum HOM05D004256 ORTHO05D005224 6.8e-25 118.2 212 34.0
AUR62034030 Chenopodium quinoa HOM05D004256 ORTHO05D005224 1.2e-24 117.5 211 34.1
Nitab4.5_0001225g0210 Nicotiana tabacum HOM05D004256 ORTHO05D005224 1.2e-24 117.5 179 38.5
AUR62043099 Chenopodium quinoa HOM05D004256 ORTHO05D005224 2.0e-24 116.7 211 34.6
Solyc02g070030.4 Solanum lycopersicum HOM05D004256 ORTHO05D005224 2.6e-24 116.3 212 34.0
Sopen02g019190 Solanum pennellii HOM05D004256 ORTHO05D005224 2.6e-24 116.3 212 34.0
EL10Ac8g19544 Beta vulgaris HOM05D004256 ORTHO05D005224 4.4e-24 115.5 211 35.1
HanXRQChr04g0117221 Helianthus annuus HOM05D004256 ORTHO05D005224 5.8e-24 115.2 226 35.4
Thhalv10024347m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 9.8e-24 114.4 212 36.3
PSO675G2772 Papaver somniferum HOM05D004256 ORTHO05D005224 9.8e-24 114.4 229 36.7
Migut.H01323 Erythranthe guttata HOM05D004256 ORTHO05D005224 1.7e-23 113.6 211 35.5
Lsat_1_v5_gn_7_34341 Lactuca sativa HOM05D004256 ORTHO05D005224 3.7e-23 112.5 122 45.9
MBI02_g25367_MAGBIO Magnolia biondii HOM05D004256 ORTHO05D005224 4.9e-23 112.1 210 37.1
SalBow7G4118 Salvia bowleyana HOM05D004256 ORTHO05D005224 1.1e-22 110.9 211 33.2
Oeu021898.3 Olea europaea HOM05D004256 ORTHO05D005224 9.2e-22 107.8 217 36.4
Sp7g19000 Schrenkiella parvula HOM05D004256 ORTHO05D005224 9.2e-22 107.8 216 34.3
BcaC09g51293 Brassica carinata HOM05D004256 ORTHO05D005224 6.0e-21 105.1 109 45.0
C01p14740 Brassica napus HOM05D004256 ORTHO05D005224 6.0e-21 105.1 150 37.3
BolC1t01426H Brassica oleracea HOM05D004256 ORTHO05D005224 6.0e-21 105.1 150 37.3
SGA_v2.0_scaffold106G30680 Striga asiatica HOM05D004256 ORTHO05D005224 7.8e-21 104.8 107 49.5
Carub.0007s2052 Capsella rubella HOM05D004256 ORTHO05D005224 1.0e-20 104.4 232 33.6
CARHR227470 Cardamine hirsuta HOM05D004256 ORTHO05D005224 2.3e-20 103.2 231 35.1
AT4G20910 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 3.0e-20 102.8 233 33.9
A01p12320 Brassica napus HOM05D004256 ORTHO05D005224 3.0e-20 102.8 119 42.9
THA.LOC104812246 Tarenaya hassleriana HOM05D004256 ORTHO05D005224 3.9e-20 102.4 214 33.2
BraA01t01177Z Brassica rapa HOM05D004256 ORTHO05D005224 1.5e-19 100.5 100 48.0
Aa31LG6G2980 Aethionema arabicum HOM05D004256 ORTHO05D005224 1.9e-19 100.1 215 33.0
BraA01t01176Z Brassica rapa HOM05D004256 ORTHO05D005224 1.9e-19 100.1 166 34.9
Thhalv10024326m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 3.3e-19 99.4 232 34.5
AL7G33240 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 5.6e-19 98.6 150 38.0
AL7G33230 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 9.5e-19 97.8 232 30.6
BraA01t01178Z Brassica rapa HOM05D004256 ORTHO05D005224 1.2e-18 97.4 111 38.7
BcaNung04718 Brassica carinata HOM05D004256 ORTHO05D005224 2.1e-18 96.7 137 37.2
ATR1098G117 Amborella trichopoda HOM05D004256 ORTHO05D005224 2.8e-18 96.3 225 32.9
BcaC09g51292 Brassica carinata HOM05D004256 ORTHO05D005224 2.8e-18 96.3 137 38.7
BolC1t01427H Brassica oleracea HOM05D004256 ORTHO05D005224 6.2e-18 95.1 138 39.1
Carub.0007s2051 Capsella rubella HOM05D004256 ORTHO05D005224 6.2e-18 95.1 122 40.2
BcaB03g11710 Brassica carinata HOM05D004256 ORTHO05D005224 1.4e-17 94.0 102 43.1
AT4G20920 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 1.8e-17 93.6 152 34.2
HPP92_009410 Vanilla planifolia HOM05D004256 ORTHO05D005224 2.3e-17 93.2 217 30.9
BcaC01g00730 Brassica carinata HOM05D004256 ORTHO05D005224 6.8e-17 91.7 98 42.9
BcaC09g51291 Brassica carinata HOM05D004256 ORTHO05D005224 1.2e-16 90.9 112 38.4
C01p14750 Brassica napus HOM05D004256 ORTHO05D005224 1.2e-16 90.9 112 38.4
BolC1t01428H Brassica oleracea HOM05D004256 ORTHO05D005224 4.4e-16 89.0 112 38.4
CARHR227480 Cardamine hirsuta HOM05D004256 ORTHO05D005224 2.9e-15 86.3 107 41.1
Zm00001eb300700 Zea mays HOM05D004256 ORTHO05D005224 8.3e-15 84.7 204 29.4
Os07g0164000 Oryza sativa ssp. japonica HOM05D004256 ORTHO05D005224 1.4e-14 84.0 223 29.1
Pp3c1_60 Physcomitrium patens HOM05D004256 ORTHO05D005224 3.5e-13 79.3 101 42.6
arahy.Tifrunner.gnm1.ann1.2P4BCH Arachis hypogaea HOM05D004256 ORTHO05D005224 1.7e-12 77.0 154 33.1
Mapoly0004s0071 Marchantia polymorpha HOM05D004256 ORTHO05D005224 3.0e-12 76.3 97 38.1
CDE02G4682 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 1.5e-11 73.9 165 33.9


User provided reference genes

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