Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 3.8e-73 278.1 143 100.0
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 8.5e-65 250.4 146 91.1
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 2.5e-64 248.8 146 91.1
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 1.3e-49 199.9 139 76.3
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 2.5e-48 195.7 130 80.0
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 2.4e-43 179.1 130 72.3
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 2.4e-43 179.1 131 68.7
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 7.7e-42 174.1 130 68.5
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 1.7e-41 172.9 130 67.7
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 2.3e-41 172.6 130 69.2
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 5.0e-41 171.4 134 69.4
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 4.2e-40 168.3 130 66.2
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 5.5e-40 167.9 131 65.6
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 7.2e-40 167.5 132 66.7
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 9.5e-40 167.2 130 66.9
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 9.5e-40 167.2 130 66.2
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.2e-39 166.8 130 66.2
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 1.2e-39 166.8 125 66.4
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.6e-39 166.4 130 63.1
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 1.6e-39 166.4 130 63.1
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.0e-38 163.7 130 64.6
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.0e-38 163.7 130 64.6
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.4e-38 163.3 130 62.3
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.4e-38 163.3 129 65.9
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 2.3e-38 162.5 130 63.1
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 2.6e-37 159.1 130 65.4
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 5.7e-37 157.9 130 62.3
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 7.5e-37 157.5 130 61.5
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 9.8e-37 157.1 130 63.1
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 9.8e-37 157.1 130 61.5
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.3e-36 156.8 134 61.9
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.7e-36 156.4 126 61.9
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 8.3e-36 154.1 130 60.0
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 1.1e-35 153.7 149 55.0
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 1.4e-35 153.3 130 59.2
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 1.8e-35 152.9 134 61.9
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 4.1e-35 151.8 130 61.5
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 4.1e-35 151.8 133 61.7
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 1.6e-34 149.8 130 59.2
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 3.5e-34 148.7 132 59.8
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 3.5e-34 148.7 130 60.0
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 5.9e-34 147.9 126 61.1
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 7.8e-34 147.5 104 71.2
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.0e-33 147.1 131 61.8
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 2.9e-33 145.6 126 58.7
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 5.0e-33 144.8 130 56.2
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.5e-32 143.3 130 56.2
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 2.5e-32 142.5 126 57.1
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 5.6e-32 141.4 130 56.2
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 7.3e-32 141.0 126 55.6
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 7.3e-32 141.0 126 55.6
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 7.3e-32 141.0 126 55.6
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 7.3e-32 141.0 126 55.6
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 7.3e-32 141.0 130 56.2
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 7.3e-32 141.0 130 56.2
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.6e-31 139.8 130 54.6
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 2.1e-31 139.4 126 55.6
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 2.1e-31 139.4 130 57.7
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 2.8e-31 139.0 133 57.9
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 2.8e-31 139.0 126 56.3
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 8.0e-31 137.5 126 57.9
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 8.0e-31 137.5 126 54.8
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.4e-30 136.7 133 57.1
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.8e-30 136.3 133 57.1
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 2.3e-30 136.0 133 51.9
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 3.0e-30 135.6 131 54.2
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 6.8e-30 134.4 133 56.4
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 8.9e-30 134.0 134 53.7
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 2.0e-29 132.9 126 53.2
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 2.6e-29 132.5 94 66.0
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 4.4e-29 131.7 130 52.3
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 4.4e-29 131.7 130 52.3
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 1.3e-28 130.2 130 50.8
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 2.2e-28 129.4 131 51.9
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 2.9e-28 129.0 130 57.7
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 3.7e-28 128.6 130 54.6
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 3.7e-28 128.6 136 50.0
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 8.3e-28 127.5 129 53.5
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 8.3e-28 127.5 127 51.2
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 8.3e-28 127.5 127 51.2
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 8.3e-28 127.5 131 51.9
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 8.3e-28 127.5 130 53.8
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.4e-27 126.7 130 56.9
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 5.4e-27 124.8 131 48.9
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 1.2e-26 123.6 131 51.1
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 3.5e-26 122.1 130 50.8
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.0e-25 120.6 130 51.5
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.7e-25 119.8 129 46.5
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 3.0e-25 119.0 131 48.9
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 3.0e-25 119.0 131 45.8
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 6.6e-25 117.9 127 46.5
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 3.3e-24 115.5 132 47.0
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 4.3e-24 115.2 131 45.8
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 5.6e-24 114.8 131 51.1
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 9.5e-24 114.0 114 57.0
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 1.2e-23 113.6 91 60.4
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 3.6e-23 112.1 110 63.6
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 4.0e-22 108.6 126 42.9
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.0e-21 106.3 128 46.1
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 7.5e-21 104.4 57 100.0
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 2.9e-20 102.4 106 46.2
Haze_09394 Corylus avellana HOM05D006561 ORTHO05D165302 2.4e-19 99.4 130 50.8
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 2.3e-17 92.8 128 42.2
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 4.3e-16 88.6 90 50.0
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 2.4e-11 72.8 123 30.1
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 5.4e-11 71.6 130 37.7
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 9.2e-11 70.9 85 44.7
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 6.6e-09 64.7 127 34.6
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 4.7e-07 58.5 52 59.6


User provided reference genes

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