Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 8.6e-75 283.5 136 100.0
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 9.9e-55 216.9 124 87.1
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 9.9e-55 216.9 124 87.1
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.7e-54 216.1 124 85.5
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.7e-54 216.1 124 85.5
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.7e-54 216.1 124 86.3
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 6.4e-54 214.2 124 85.5
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 1.1e-53 213.4 124 85.5
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 1.1e-53 213.4 124 84.7
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 1.4e-53 213.0 124 84.7
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 1.4e-53 213.0 124 85.5
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 1.9e-53 212.6 124 83.1
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 3.2e-53 211.8 121 86.0
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 5.4e-53 211.1 124 83.9
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 5.4e-53 211.1 124 83.9
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 5.4e-53 211.1 124 84.7
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 7.1e-53 210.7 124 85.5
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 7.1e-53 210.7 124 84.7
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-52 209.9 124 82.3
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-52 209.9 124 82.3
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-52 209.9 124 82.3
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-52 209.9 124 82.3
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-52 209.9 124 82.3
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-52 209.9 124 82.3
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.6e-52 209.5 124 83.9
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 3.5e-52 208.4 124 84.7
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 7.8e-52 207.2 119 85.7
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 1.3e-51 206.5 123 83.7
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 1.3e-51 206.5 124 83.1
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 1.7e-51 206.1 124 81.5
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 3.9e-51 204.9 118 83.9
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 3.9e-51 204.9 122 82.8
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.1e-51 204.5 126 79.4
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.1e-51 204.5 126 79.4
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 1.1e-50 203.4 124 79.8
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 1.9e-50 202.6 120 81.7
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 1.9e-50 202.6 120 81.7
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 1.9e-50 202.6 120 81.7
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.9e-50 202.6 121 81.8
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.9e-50 202.6 121 81.8
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 5.6e-50 201.1 124 79.8
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 9.6e-50 200.3 124 81.5
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.6e-49 199.5 119 81.5
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.1e-49 199.1 120 83.3
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 2.8e-49 198.7 124 80.6
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 2.8e-49 198.7 124 80.6
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 2.8e-49 198.7 124 80.6
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.8e-49 198.7 126 77.8
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 3.6e-49 198.4 124 80.6
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 3.6e-49 198.4 124 80.6
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 3.6e-49 198.4 124 80.6
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 3.6e-49 198.4 124 80.6
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 3.6e-49 198.4 124 80.6
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 3.6e-49 198.4 124 80.6
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 4.8e-49 198.0 117 82.1
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 4.8e-49 198.0 120 80.8
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 1.1e-48 196.8 124 79.8
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 1.4e-48 196.4 124 79.8
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 3.1e-48 195.3 124 79.0
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 5.3e-48 194.5 120 79.2
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 1.2e-47 193.4 139 71.9
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.0e-47 192.6 117 79.5
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 2.0e-47 192.6 121 79.3
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 2.6e-47 192.2 124 77.4
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 4.5e-47 191.4 120 80.0
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 4.5e-47 191.4 120 80.0
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 4.5e-47 191.4 120 79.2
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 1.4e-45 186.4 115 80.9
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 2.4e-45 185.7 119 78.2
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 4.6e-44 181.4 124 71.8
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 6.0e-44 181.0 120 75.8
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 1.1e-42 176.8 113 76.1
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.3e-42 175.3 115 74.8
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 9.6e-42 173.7 115 74.8
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 5.3e-40 167.9 119 72.3
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 4.5e-39 164.9 123 66.7
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 4.5e-39 164.9 115 69.6
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 4.5e-39 164.9 119 67.2
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 3.8e-38 161.8 113 69.9
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 6.4e-38 161.0 124 71.0
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.1e-37 160.2 98 81.6
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.9e-37 159.5 103 77.7
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 1.9e-37 159.5 98 77.6
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 3.2e-37 158.7 127 67.7
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.2e-37 158.7 98 80.6
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 4.2e-37 158.3 97 81.4
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 5.5e-37 157.9 127 68.5
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.5e-37 157.9 116 70.7
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 7.1e-37 157.5 96 81.2
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 1.6e-36 156.4 97 80.4
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.1e-36 156.0 96 80.2
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 2.7e-36 155.6 94 80.9
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 1.3e-35 153.3 96 80.2
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 1.3e-35 153.3 124 67.7
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 8.7e-35 150.6 95 75.8
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 8.7e-35 150.6 95 75.8
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 2.5e-34 149.1 95 76.8
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 2.5e-34 149.1 90 78.9
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 4.3e-34 148.3 94 80.9
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 5.6e-34 147.9 152 53.3
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.6e-34 147.9 93 78.5
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.3e-33 146.7 94 74.5
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 2.1e-33 146.0 98 73.5
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.1e-33 146.0 100 73.0
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 4.8e-33 144.8 103 67.0
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 6.2e-33 144.4 124 62.9
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 6.2e-33 144.4 117 65.0
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.1e-32 143.7 94 74.5
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 1.8e-32 142.9 120 65.0
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 1.8e-32 142.9 122 63.1
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 3.1e-32 142.1 94 73.4
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.0e-32 141.7 95 72.6
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 1.2e-31 140.2 119 63.0
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.4e-31 138.7 87 80.5
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-30 136.3 89 76.4
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.2e-30 136.0 78 83.3
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 4.2e-29 131.7 80 81.2
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.1e-29 131.0 86 76.7
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 1.6e-28 129.8 130 51.5
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 2.7e-28 129.0 121 47.9
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 2.7e-28 129.0 72 84.7
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.5e-28 128.6 135 54.8
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.9e-28 127.5 88 73.9
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 9.7e-26 120.6 70 82.9
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 2.2e-25 119.4 67 80.6
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.8e-25 119.0 70 81.4
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 2.8e-25 119.0 87 74.7
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 2.4e-24 115.9 127 48.8
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 5.3e-24 114.8 96 61.5
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 5.3e-24 114.8 86 72.1
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 6.9e-24 114.4 85 68.2
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 2.0e-23 112.8 56 89.3
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 2.9e-22 109.0 128 46.1
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.0e-22 108.2 70 75.7
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.0e-22 108.2 70 75.7
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.0e-22 108.2 70 75.7
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.0e-22 108.2 70 75.7
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.0e-22 108.2 70 75.7
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 1.9e-21 106.3 81 67.9
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-21 106.3 69 75.4
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-21 106.3 69 75.4
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-21 106.3 69 75.4
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-21 106.3 69 75.4
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.9e-21 106.3 69 75.4
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 2.5e-21 105.9 128 43.8
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 1.8e-19 99.8 56 80.4
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 6.7e-19 97.8 45 97.8
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.5e-18 96.7 102 51.0
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 7.4e-18 94.4 115 44.3
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 1.7e-17 93.2 59 81.4
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.2e-17 90.9 115 47.0
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 1.1e-16 90.5 60 78.3
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 1.1e-16 90.5 62 72.6
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 2.4e-16 89.4 59 78.0
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 2.4e-16 89.4 56 80.4
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 3.1e-16 89.0 51 82.4
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 4.1e-16 88.6 88 55.7
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 9.1e-16 87.4 45 84.4
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-15 86.7 77 58.4
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 2.6e-15 85.9 57 71.9
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 5.9e-15 84.7 58 74.1
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 5.9e-15 84.7 88 51.1
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 2.2e-14 82.8 55 74.5
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 5.0e-14 81.6 53 73.6
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 5.0e-14 81.6 53 73.6
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 1.1e-13 80.5 49 79.6
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 1.4e-13 80.1 37 97.3
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.9e-13 79.7 78 57.7
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 7.2e-13 77.8 52 71.2
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 2.1e-12 76.3 45 82.2
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 1.4e-11 73.6 57 68.4
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.6e-10 69.3 49 67.3
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.3e-09 67.0 42 76.2
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 2.8e-09 65.9 47 68.1
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 8.2e-09 64.3 49 65.3
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 2.6e-07 59.3 36 77.8
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 6.5e-06 54.7 26 92.3


User provided reference genes

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