Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05454 Corylus avellana HOM05D002606 ORTHO05D003016 5.8e-59 230.7 120 100.0
Cfa001058 Carpinus fangiana HOM05D002606 ORTHO05D003016 4.1e-36 154.8 107 79.4
Haze_05457 Corylus avellana HOM05D002606 ORTHO05D003016 4.1e-36 154.8 105 81.0
QL05p052775 Quercus lobata HOM05D002606 ORTHO05D003016 8.2e-29 130.6 113 67.3
COL.COLO4_22817 Corchorus olitorius HOM05D002606 ORTHO05D003016 2.5e-25 119.0 105 67.6
Gohir.A10G032600 Gossypium hirsutum HOM05D002606 ORTHO05D003016 9.4e-25 117.1 95 68.4
Gorai.011G035100 Gossypium raimondii HOM05D002606 ORTHO05D003016 1.6e-24 116.3 95 68.4
TWI09G1585 Tripterygium wilfordii HOM05D002606 ORTHO05D003016 4.7e-24 114.8 105 61.9
Duzib235G0230 Durio zibethinus HOM05D002606 ORTHO05D003016 6.1e-24 114.4 105 62.9
Gohir.D10G033300 Gossypium hirsutum HOM05D002606 ORTHO05D003016 6.1e-24 114.4 95 67.4
Prupe.4G072200 Prunus persica HOM05D002606 ORTHO05D003016 1.4e-23 113.2 90 72.2
RcHm_v2.0_Chr5g0012831 Rosa chinensis HOM05D002606 ORTHO05D003016 1.4e-23 113.2 104 61.5
Atru.chr10.1471 Acer truncatum HOM05D002606 ORTHO05D003016 5.2e-23 111.3 104 62.5
FAN21G3713 Fragaria x ananassa HOM05D002606 ORTHO05D003016 8.8e-23 110.5 106 60.4
FAN16G3491 Fragaria x ananassa HOM05D002606 ORTHO05D003016 2.0e-22 109.4 103 61.2
Cpa.g.sc17.162 Carica papaya HOM05D002606 ORTHO05D003016 2.6e-22 109.0 105 60.0
Thecc.06G159700 Theobroma cacao HOM05D002606 ORTHO05D003016 2.6e-22 109.0 101 63.4
FvH4_3g06460 Fragaria vesca HOM05D002606 ORTHO05D003016 5.7e-22 107.8 103 60.2
FAN25G0150 Fragaria x ananassa HOM05D002606 ORTHO05D003016 5.7e-22 107.8 103 60.2
Potri.011G077001 Populus trichocarpa HOM05D002606 ORTHO05D003016 5.7e-22 107.8 102 62.7
FAN11G1742 Fragaria x ananassa HOM05D002606 ORTHO05D003016 7.5e-22 107.5 103 60.2
Actinidia19476 Actinidia chinensis HOM05D002606 ORTHO05D003016 1.3e-21 106.7 101 60.4
CSS0035276 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 1.7e-21 106.3 102 59.8
MD10G1269500 Malus domestica HOM05D002606 ORTHO05D003016 1.7e-21 106.3 110 57.3
Hma1.2p1_0015F.1_g010580 Hydrangea macrophylla HOM05D002606 ORTHO05D003016 2.8e-21 105.5 93 62.4
CsaV3_1G032850 Cucumis sativus L. HOM05D002606 ORTHO05D003016 1.1e-20 103.6 100 62.0
CSS0038732 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 1.4e-20 103.2 121 55.4
Nitab4.5_0007383g0040 Nicotiana tabacum HOM05D002606 ORTHO05D003016 1.4e-20 103.2 121 51.2
vmacro03988 Vaccinium macrocarpon HOM05D002606 ORTHO05D003016 1.4e-20 103.2 103 59.2
Eucgr.D00356 Eucalyptus grandis HOM05D002606 ORTHO05D003016 1.8e-20 102.8 108 56.5
Nitab4.5_0003746g0040 Nicotiana tabacum HOM05D002606 ORTHO05D003016 5.3e-20 101.3 110 53.6
Cc09_g09990 Coffea canephora HOM05D002606 ORTHO05D003016 9.1e-20 100.5 94 61.7
ClCG03G007250 Citrullus lanatus HOM05D002606 ORTHO05D003016 1.6e-19 99.8 102 58.8
Nn3g20963 Nelumbo nucifera HOM05D002606 ORTHO05D003016 5.9e-19 97.8 101 52.5
Lalb_Chr12g0204841 Lupinus albus HOM05D002606 ORTHO05D003016 7.7e-19 97.4 107 56.1
Oeu001059.1 Olea europaea HOM05D002606 ORTHO05D003016 1.3e-18 96.7 84 66.7
VMungo0251G0960 Vigna mungo HOM05D002606 ORTHO05D003016 1.3e-18 96.7 84 65.5
CiPaw.09G132100 Carya illinoinensis HOM05D002606 ORTHO05D003016 1.7e-18 96.3 80 70.0
MELO3C002697.2 Cucumis melo HOM05D002606 ORTHO05D003016 2.2e-18 95.9 100 59.0
Lj4g0026804 Lotus japonicus HOM05D002606 ORTHO05D003016 2.9e-18 95.5 83 66.3
Aqoxy4G00175 Aquilegia oxysepala HOM05D002606 ORTHO05D003016 6.5e-18 94.4 92 56.5
Eucgr.D00367 Eucalyptus grandis HOM05D002606 ORTHO05D003016 1.9e-17 92.8 109 52.3
MD00G1093000 Malus domestica HOM05D002606 ORTHO05D003016 1.9e-17 92.8 111 54.1
Manes.17G062800 Manihot esculenta HOM05D002606 ORTHO05D003016 1.9e-17 92.8 100 55.0
MSTRG.16192 Avicennia marina HOM05D002606 ORTHO05D003016 2.5e-17 92.4 85 62.4
CANSAT35G1314 Cannabis sativa HOM05D002606 ORTHO05D003016 2.5e-17 92.4 81 64.2
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 2.5e-17 92.4 71 70.4
PGSC0003DMG400007247 Solanum tuberosum HOM05D002606 ORTHO05D003016 3.2e-17 92.0 98 53.1
HanXRQChr04g0115551 Helianthus annuus HOM05D002606 ORTHO05D003016 7.2e-17 90.9 76 68.4
Glyma.08G120900 Glycine max HOM05D002606 ORTHO05D003016 9.4e-17 90.5 86 61.6
CARHR028950 Cardamine hirsuta HOM05D002606 ORTHO05D003016 1.2e-16 90.1 96 58.3
Lsat_1_v5_gn_7_26381 Lactuca sativa HOM05D002606 ORTHO05D003016 1.2e-16 90.1 70 68.6
PSO675G2539 Papaver somniferum HOM05D002606 ORTHO05D003016 1.2e-16 90.1 115 49.6
ATR0763G174 Amborella trichopoda HOM05D002606 ORTHO05D003016 2.1e-16 89.4 77 63.6
Peaxi162Scf00308g00815 Petunia axillaris HOM05D002606 ORTHO05D003016 2.1e-16 89.4 94 54.3
Sed0008006 Sechium edule HOM05D002606 ORTHO05D003016 2.1e-16 89.4 99 55.6
TPR.G6726 Trifolium pratense HOM05D002606 ORTHO05D003016 2.1e-16 89.4 80 65.0
PSO541G3031 Papaver somniferum HOM05D002606 ORTHO05D003016 2.7e-16 89.0 115 48.7
Aa31LG6G6030 Aethionema arabicum HOM05D002606 ORTHO05D003016 3.6e-16 88.6 85 58.8
AL1G43460 Arabidopsis lyrata HOM05D002606 ORTHO05D003016 4.7e-16 88.2 97 54.6
Ca_17874_v3 Cicer arietinum L. HOM05D002606 ORTHO05D003016 4.7e-16 88.2 98 57.1
Ciclev10014561m.g Citrus clementina HOM05D002606 ORTHO05D003016 4.7e-16 88.2 77 66.2
AT1G29630 Arabidopsis thaliana HOM05D002606 ORTHO05D003016 6.1e-16 87.8 97 54.6
Phvul.002G243800 Phaseolus vulgaris HOM05D002606 ORTHO05D003016 6.1e-16 87.8 81 61.7
GSVIVG01021316001 Vitis vinifera HOM05D002606 ORTHO05D003016 6.1e-16 87.8 99 55.6
Thhalv10006968m.g Eutrema salsugineum HOM05D002606 ORTHO05D003016 8.0e-16 87.4 86 62.8
Solyc02g071530.2 Solanum lycopersicum HOM05D002606 ORTHO05D003016 8.0e-16 87.4 118 47.5
Sopen02g020560 Solanum pennellii HOM05D002606 ORTHO05D003016 8.0e-16 87.4 119 47.1
A07p10450 Brassica napus HOM05D002606 ORTHO05D003016 1.4e-15 86.7 87 58.6
C07p16090 Brassica napus HOM05D002606 ORTHO05D003016 1.4e-15 86.7 87 58.6
BolC7t42094H Brassica oleracea HOM05D002606 ORTHO05D003016 1.4e-15 86.7 87 58.6
BraA07t28845Z Brassica rapa HOM05D002606 ORTHO05D003016 1.4e-15 86.7 87 58.6
Medtr8g087940 Medicago truncatula HOM05D002606 ORTHO05D003016 1.4e-15 86.7 98 55.1
BcaB03g13871 Brassica carinata HOM05D002606 ORTHO05D003016 1.8e-15 86.3 87 59.8
Carub.0001s2785 Capsella rubella HOM05D002606 ORTHO05D003016 1.8e-15 86.3 98 56.1
CAN.G257.100 Capsicum annuum HOM05D002606 ORTHO05D003016 1.8e-15 86.3 98 52.0
Sp1g25530 Schrenkiella parvula HOM05D002606 ORTHO05D003016 1.8e-15 86.3 84 64.3
ECA236G2241 Erigeron canadensis HOM05D002606 ORTHO05D003016 4.0e-15 85.1 91 56.0
THA.LOC104812654 Tarenaya hassleriana HOM05D002606 ORTHO05D003016 4.0e-15 85.1 89 59.6
Lj1A1180T81 Lonicera japonica HOM05D002606 ORTHO05D003016 5.2e-15 84.7 70 70.0
DCAR_003956 Daucus carota HOM05D002606 ORTHO05D003016 1.2e-14 83.6 92 56.5
BcaC06g35445 Brassica carinata HOM05D002606 ORTHO05D003016 2.0e-14 82.8 71 64.8
Psat7g066200 Pisum sativum HOM05D002606 ORTHO05D003016 2.0e-14 82.8 99 53.5
Actinidia16757 Actinidia chinensis HOM05D002606 ORTHO05D003016 5.7e-14 81.3 71 62.0
AUR62027619 Chenopodium quinoa HOM05D002606 ORTHO05D003016 5.7e-14 81.3 117 42.7
Sc24g0001920 Simmondsia chinensis HOM05D002606 ORTHO05D003016 9.8e-14 80.5 93 55.9
SalBow8G0847 Salvia bowleyana HOM05D002606 ORTHO05D003016 1.7e-13 79.7 68 63.2
SalBow8G3031 Salvia bowleyana HOM05D002606 ORTHO05D003016 1.7e-13 79.7 68 63.2
arahy.Tifrunner.gnm1.ann1.0CW7N2 Arachis hypogaea HOM05D002606 ORTHO05D003016 2.8e-13 79.0 77 61.0
arahy.Tifrunner.gnm1.ann1.CS3QBI Arachis hypogaea HOM05D002606 ORTHO05D003016 2.8e-13 79.0 77 61.0
AUR62035823 Chenopodium quinoa HOM05D002606 ORTHO05D003016 2.8e-13 79.0 114 43.9
HPP92_017792 Vanilla planifolia HOM05D002606 ORTHO05D003016 1.4e-12 76.6 91 50.5
EL10Ac8g19815 Beta vulgaris HOM05D002606 ORTHO05D003016 4.1e-12 75.1 117 41.9
SGA_v2.0_scaffold1G00119 Striga asiatica HOM05D002606 ORTHO05D003016 7.0e-12 74.3 79 58.2
Migut.M00971 Erythranthe guttata HOM05D002606 ORTHO05D003016 1.2e-11 73.6 66 62.1
Hund17843 Selenicereus undatus HOM05D002606 ORTHO05D003016 2.9e-10 68.9 110 42.7
Ah.14g086800 Amaranthus hybridus HOM05D002606 ORTHO05D003016 3.8e-10 68.6 69 58.0
Os01g0777300 Oryza sativa ssp. japonica HOM05D002606 ORTHO05D003016 3.8e-10 68.6 58 65.5
HanXRQChr13g0408621 Helianthus annuus HOM05D002606 ORTHO05D003016 5.0e-10 68.2 60 61.7
HanXRQChr01g0030101 Helianthus annuus HOM05D002606 ORTHO05D003016 8.6e-10 67.4 59 61.0
Zm00001eb151620 Zea mays HOM05D002606 ORTHO05D003016 5.5e-09 64.7 86 51.2
unitig_32.g11096 Utricularia gibba HOM05D002606 ORTHO05D003016 3.6e-08 62.0 78 50.0
Zm00001eb032720 Zea mays HOM05D006146 ORTHO05D007924 1.4e-07 60.1 57 63.2
SHI19402 Sapria himalayana HOM05D002606 ORTHO05D003016 4.0e-07 58.5 65 52.3
AagrBONN_evm.TU.Sc2ySwM_228.4382 Anthoceros agrestis HOM05D002606 ORTHO05D003016 9.8e-06 53.9 113 34.5


User provided reference genes

Program Settings