Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 3.4e-167 591.7 316 100.0
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 8.8e-163 577.0 316 97.5
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 7.7e-143 510.8 316 87.7
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 1.4e-139 500.0 316 84.8
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 8.8e-131 470.7 317 82.3
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 3.4e-130 468.8 316 80.4
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 1.2e-127 460.3 317 80.1
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 3.5e-127 458.8 319 78.7
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 4.2e-125 451.8 317 79.2
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 4.7e-124 448.4 320 79.1
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 8.9e-123 444.1 321 76.0
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 2.6e-122 442.6 318 73.3
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 3.4e-122 442.2 316 76.6
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 3.4e-122 442.2 316 78.2
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 4.4e-122 441.8 313 78.3
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 4.4e-122 441.8 317 76.0
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 4.4e-122 441.8 316 77.2
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 4.4e-122 441.8 317 76.3
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 4.9e-121 438.3 321 78.2
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 8.3e-121 437.6 303 80.5
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 7.0e-120 434.5 327 73.7
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 9.2e-120 434.1 322 75.2
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 9.2e-120 434.1 319 74.9
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 1.2e-119 433.7 316 74.7
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 1.2e-119 433.7 302 81.8
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 7.8e-119 431.0 317 75.7
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 1.3e-118 430.3 326 71.2
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 2.3e-118 429.5 257 88.3
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 5.0e-118 428.3 316 75.3
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 1.5e-117 426.8 320 75.9
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 4.3e-117 425.2 335 69.9
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 2.1e-116 422.9 316 70.9
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 4.7e-116 421.8 316 73.7
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 1.4e-115 420.2 324 73.8
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 8.9e-115 417.5 319 72.7
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 8.9e-115 417.5 319 71.2
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 2.6e-114 416.0 317 71.9
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 2.2e-113 412.9 316 73.4
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 2.2e-113 412.9 317 72.9
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 2.9e-113 412.5 249 88.0
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 3.7e-113 412.1 307 74.6
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 4.9e-113 411.8 319 71.5
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 1.4e-112 410.2 308 76.6
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 5.4e-112 408.3 285 76.8
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 7.0e-112 407.9 321 69.2
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.6e-111 406.8 274 77.7
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 1.6e-111 406.8 279 79.2
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 3.5e-111 405.6 274 76.6
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 4.6e-111 405.2 321 68.8
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 4.6e-111 405.2 296 75.3
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 1.0e-110 404.1 283 71.7
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 1.3e-110 403.7 288 72.9
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 1.3e-110 403.7 316 72.8
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 1.3e-110 403.7 283 71.7
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 1.7e-110 403.3 317 71.9
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 5.0e-110 401.7 308 74.0
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 8.6e-110 401.0 325 69.8
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 3.3e-109 399.1 311 72.7
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 7.3e-109 397.9 303 71.3
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 9.5e-109 397.5 322 71.4
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 9.5e-109 397.5 299 71.2
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 1.2e-108 397.1 276 75.7
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 2.1e-108 396.4 275 77.1
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 3.6e-108 395.6 300 70.3
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 3.1e-107 392.5 303 70.6
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 8.9e-107 391.0 316 66.8
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 1.2e-106 390.6 320 69.7
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 7.5e-106 387.9 324 68.2
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 9.8e-106 387.5 266 76.3
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 6.4e-105 384.8 316 68.4
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 6.4e-105 384.8 247 78.9
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 1.1e-104 384.0 288 71.9
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 7.1e-104 381.3 282 71.3
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 7.1e-104 381.3 411 55.2
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 1.3e-102 377.1 263 74.9
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 1.3e-102 377.1 324 66.0
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 2.3e-102 376.3 316 67.4
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 3.9e-102 375.6 324 65.7
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 5.1e-102 375.2 294 70.1
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 1.5e-101 373.6 317 63.1
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 1.5e-101 373.6 307 67.1
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.4e-99 367.1 225 83.1
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 2.3e-99 366.3 282 73.8
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 4.0e-99 365.5 320 63.8
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 8.9e-99 364.4 305 65.2
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 2.6e-98 362.8 288 68.4
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 3.4e-98 362.5 324 64.2
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 8.3e-97 357.8 305 66.9
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 1.9e-96 356.7 284 72.2
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 7.1e-96 354.8 302 63.9
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.2e-95 354.0 317 65.6
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 3.9e-94 349.0 269 69.9
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 2.1e-92 343.2 228 75.0
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 1.4e-91 340.5 225 76.0
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 1.4e-91 340.5 225 76.0
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 4.0e-91 339.0 303 58.7
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 4.9e-89 332.0 228 77.6
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 1.1e-88 330.9 185 89.2
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 7.8e-87 324.7 249 66.7
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 1.3e-86 323.9 306 62.7
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 4.3e-85 318.9 237 75.1
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 4.4e-82 308.9 321 58.9
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 2.2e-81 306.6 287 60.6
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 7.1e-80 301.6 189 86.8
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 4.8e-76 288.9 259 61.0
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.6e-71 273.9 261 61.3
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 1.6e-71 273.9 213 71.4
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 2.0e-66 256.9 208 68.8
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 1.0e-62 244.6 253 52.2
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 1.3e-57 227.6 276 47.1
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 7.1e-56 221.9 251 52.2
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 4.3e-53 212.6 192 59.4
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 2.2e-49 200.3 163 70.6
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 7.4e-45 185.3 128 69.5
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 1.5e-42 177.6 173 49.7
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 1.1e-40 171.4 125 67.2
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 5.9e-34 149.1 105 80.0
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 7.7e-34 148.7 182 49.5
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 1.0e-33 148.3 98 77.6
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 4.4e-29 132.9 120 61.7
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.2e-25 120.6 78 78.2
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 2.9e-25 120.2 238 36.6
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 5.7e-21 105.9 107 57.0
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 7.0e-19 99.0 68 64.7
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 3.0e-14 83.6 72 63.9
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 2.2e-12 77.4 106 47.2
Lj9C654T3 Lonicera japonica HOM05D006016 ORTHO05D007553 2.3e-09 67.4 46 80.4
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 2.9e-09 67.0 35 77.1
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 1.1e-08 65.1 65 58.5
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 1.9e-08 64.3 65 63.1
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 1.4e-06 58.2 46 71.7
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 1.8e-06 57.8 163 36.2
Medtr1g072620 Medicago truncatula HOM05D006016 ORTHO05D007553 4.0e-06 56.6 49 61.2


User provided reference genes

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