Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01033 Corylus avellana HOM05D001283 ORTHO05D001109 1.8e-41 172.2 88 100.0
CiPaw.01G155400 Carya illinoinensis HOM05D001283 ORTHO05D001109 1.0e-23 113.2 63 92.1
Prupe.1G144400 Prunus persica HOM05D001283 ORTHO05D001109 6.5e-23 110.5 62 91.9
CiPaw.02G088000 Carya illinoinensis HOM05D001283 ORTHO05D001109 2.5e-22 108.6 62 91.9
MELO3C006598.2 Cucumis melo HOM05D001283 ORTHO05D001109 2.5e-22 108.6 62 90.3
CsaV3_3G014050 Cucumis sativus L. HOM05D001283 ORTHO05D001109 2.5e-22 108.6 62 90.3
QL06p006724 Quercus lobata HOM05D001283 ORTHO05D001109 3.9e-20 101.3 64 89.1
Sed0023172 Sechium edule HOM05D001283 ORTHO05D001109 3.9e-20 101.3 63 82.5
Cpa.g.sc16.86 Carica papaya HOM05D001283 ORTHO05D001109 9.7e-19 96.7 62 85.5
Manes.03G189500 Manihot esculenta HOM05D001283 ORTHO05D001109 1.4e-17 92.8 64 79.7
Potri.008G196700 Populus trichocarpa HOM05D001283 ORTHO05D001109 1.8e-17 92.4 62 82.3
arahy.Tifrunner.gnm1.ann1.E8KUAX Arachis hypogaea HOM05D001283 ORTHO05D001109 2.4e-17 92.0 62 82.3
MD13G1175700 Malus domestica HOM05D001283 ORTHO05D001109 2.4e-17 92.0 62 79.0
Potri.010G026100 Populus trichocarpa HOM05D001283 ORTHO05D001109 1.5e-16 89.4 62 79.0
Sabra08G0163500 Salix brachista HOM05D001283 ORTHO05D001109 2.6e-16 88.6 66 75.8
Psat4g030000 Pisum sativum HOM05D001283 ORTHO05D001109 5.9e-16 87.4 62 80.6
Lalb_Chr07g0177531 Lupinus albus HOM05D001283 ORTHO05D001109 7.7e-16 87.0 62 79.0
MD16G1177500 Malus domestica HOM05D001283 ORTHO05D001109 7.7e-16 87.0 62 77.4
TPR.G14949 Trifolium pratense HOM05D001283 ORTHO05D001109 7.7e-16 87.0 63 79.4
arahy.Tifrunner.gnm1.ann1.J21882 Arachis hypogaea HOM05D001283 ORTHO05D001109 1.3e-15 86.3 59 81.4
Ca_21557_v3 Cicer arietinum L. HOM05D001283 ORTHO05D001109 1.3e-15 86.3 61 78.7
Gohir.D10G164700 Gossypium hirsutum HOM05D001283 ORTHO05D001109 1.3e-15 86.3 62 75.8
Gorai.011G183900 Gossypium raimondii HOM05D001283 ORTHO05D001109 1.3e-15 86.3 62 75.8
SHI00327 Sapria himalayana HOM05D001283 ORTHO05D001109 1.7e-15 85.9 63 79.4
Gohir.A10G103700 Gossypium hirsutum HOM05D001283 ORTHO05D001109 3.8e-15 84.7 62 74.2
RcHm_v2.0_Chr4g0420501 Rosa chinensis HOM05D001283 ORTHO05D001109 3.8e-15 84.7 69 75.4
Duzib151G0792 Durio zibethinus HOM05D001283 ORTHO05D001109 1.4e-14 82.8 62 74.2
Eucgr.B01229 Eucalyptus grandis HOM05D001283 ORTHO05D001109 2.5e-14 82.0 66 72.7
Medtr4g118630 Medicago truncatula HOM05D001283 ORTHO05D001109 3.2e-14 81.6 63 76.2
Sabra10G0013500 Salix brachista HOM05D001283 ORTHO05D001109 3.2e-14 81.6 62 75.8
CANSAT78G1728 Cannabis sativa HOM05D001283 ORTHO05D001109 1.2e-13 79.7 63 76.2
TAR636G2521 Trochodendron aralioides HOM05D001283 ORTHO05D001109 1.2e-13 79.7 62 77.4
Ciclev10005625m.g Citrus clementina HOM05D001283 ORTHO05D001109 1.6e-13 79.3 64 78.1
Duzib212G0373 Durio zibethinus HOM05D001283 ORTHO05D001109 3.6e-13 78.2 62 71.0
Nn4g26085 Nelumbo nucifera HOM05D001283 ORTHO05D001109 3.6e-13 78.2 62 75.8
Glyma.07G252700 Glycine max HOM05D001283 ORTHO05D001109 7.9e-13 77.0 64 71.9
TWI09G1539 Tripterygium wilfordii HOM05D001283 ORTHO05D001109 1.0e-12 76.6 64 73.4
TWI73G0638 Tripterygium wilfordii HOM05D001283 ORTHO05D001109 2.3e-12 75.5 64 73.4
HPP92_017193 Vanilla planifolia HOM05D001283 ORTHO05D001109 6.7e-12 73.9 64 73.4
HPP92_027339 Vanilla planifolia HOM05D001283 ORTHO05D001109 6.7e-12 73.9 64 73.4
GSVIVG01022010001 Vitis vinifera HOM05D001283 ORTHO05D001109 8.8e-12 73.6 62 74.2
Sed0005553 Sechium edule HOM05D001283 ORTHO05D001109 1.5e-11 72.8 65 72.3
FvH4_4g16920 Fragaria vesca HOM05D001283 ORTHO05D001109 2.5e-11 72.0 69 68.1
FAN07G0347 Fragaria x ananassa HOM05D001283 ORTHO05D001109 2.5e-11 72.0 69 68.1
FAN12G2571 Fragaria x ananassa HOM05D001283 ORTHO05D001109 5.7e-11 70.9 69 65.2
FAN12G3440 Fragaria x ananassa HOM05D001283 ORTHO05D001109 5.7e-11 70.9 69 65.2
Thecc.04G274400 Theobroma cacao HOM05D001283 ORTHO05D001109 5.7e-11 70.9 62 64.5
Lalb_Chr13g0303951 Lupinus albus HOM05D001283 ORTHO05D001109 3.7e-10 68.2 62 66.1
TAR362G1256 Trochodendron aralioides HOM05D001283 ORTHO05D001109 4.8e-10 67.8 62 74.2
FAN17G2094 Fragaria x ananassa HOM05D001283 ORTHO05D001109 1.8e-09 65.9 73 60.3
FAN22G0118 Fragaria x ananassa HOM05D001283 ORTHO05D001109 4.1e-09 64.7 67 64.2
TAR633G1837 Trochodendron aralioides HOM05D001283 ORTHO05D001109 9.1e-09 63.5 63 69.8
Carub.0006s1711 Capsella rubella HOM05D001283 ORTHO05D001109 1.5e-08 62.8 62 61.3
CDE11G1051 Ceratophyllum demersum HOM05D001283 ORTHO05D001109 1.5e-08 62.8 67 65.7
Aqoxy5G00595 Aquilegia oxysepala HOM05D001283 ORTHO05D001109 2.6e-08 62.0 65 70.8
Hund24897 Selenicereus undatus HOM05D001283 ORTHO05D001109 2.6e-08 62.0 62 67.7
Sc25g0004640 Simmondsia chinensis HOM05D001283 ORTHO05D001109 3.4e-08 61.6 62 66.1
Aa31LG11G10880 Aethionema arabicum HOM05D001283 ORTHO05D001109 4.5e-08 61.2 62 61.3
Rhsim04G0214200 Rhododendron simsii HOM05D001283 ORTHO05D001109 1.0e-07 60.1 67 62.7
CSS0007163 Camellia sinensis var. sinensis HOM05D001283 ORTHO05D001109 1.3e-07 59.7 62 62.9
Phvul.003G099500 Phaseolus vulgaris HOM05D001283 ORTHO05D001109 1.3e-07 59.7 41 78.0
VMungo1215G1875 Vigna mungo HOM05D001283 ORTHO05D001109 1.3e-07 59.7 41 78.0
CDE05G2235 Ceratophyllum demersum HOM05D001283 ORTHO05D001109 1.7e-07 59.3 67 64.2
Glyma.17G021700 Glycine max HOM05D001283 ORTHO05D001109 1.7e-07 59.3 64 60.9
Lj4g0004311 Lotus japonicus HOM05D001283 ORTHO05D001109 1.7e-07 59.3 63 61.9
vmacro15277 Vaccinium macrocarpon HOM05D001283 ORTHO05D001109 2.9e-07 58.5 62 64.5
CARHR194190 Cardamine hirsuta HOM05D001283 ORTHO05D001109 5.5e-06 54.3 54 59.3


User provided reference genes

Program Settings