Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 4.0e-99 364.8 185 100.0
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 1.8e-83 312.8 178 87.6
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.6e-76 289.7 181 80.7
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 3.2e-72 275.4 178 79.2
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 3.5e-71 271.9 179 76.5
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 3.9e-70 268.5 182 73.6
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 3.9e-70 268.5 178 78.1
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 1.5e-69 266.5 182 74.2
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 1.5e-69 266.5 178 75.3
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 2.5e-69 265.8 178 77.5
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 3.3e-69 265.4 178 76.4
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.3e-68 263.5 182 73.6
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.6e-68 263.1 178 76.4
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 3.6e-68 261.9 179 77.1
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 6.2e-68 261.2 178 74.7
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.1e-67 260.4 178 75.8
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 1.8e-67 259.6 178 74.2
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 1.8e-67 259.6 173 75.7
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 3.1e-67 258.8 179 74.3
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 5.3e-67 258.1 178 73.6
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 3.4e-66 255.4 185 73.5
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 7.6e-66 254.2 178 73.6
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 7.6e-66 254.2 173 73.4
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 1.7e-65 253.1 178 73.6
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.2e-65 252.7 178 71.9
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.8e-65 251.9 180 73.3
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 9.3e-64 247.3 179 69.3
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 2.7e-63 245.7 178 71.3
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 6.0e-63 244.6 174 72.4
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 1.0e-62 243.8 205 63.9
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.0e-62 243.8 188 67.6
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 2.3e-62 242.7 173 70.5
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 3.0e-62 242.3 175 70.9
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 3.0e-62 242.3 184 69.0
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 5.1e-62 241.5 177 70.6
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 5.1e-62 241.5 184 67.9
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 1.1e-61 240.4 181 70.2
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 1.5e-61 240.0 215 62.3
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 1.9e-61 239.6 175 70.3
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 3.3e-61 238.8 181 70.7
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 3.3e-61 238.8 173 69.9
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 5.6e-61 238.0 180 68.9
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 9.6e-61 237.3 199 65.8
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 9.6e-61 237.3 175 70.9
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 1.3e-60 236.9 202 63.9
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.3e-60 236.9 181 69.6
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.6e-60 236.5 185 64.3
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 3.7e-60 235.3 181 68.5
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.7e-60 235.3 199 65.3
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 4.8e-60 235.0 189 66.1
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 4.8e-60 235.0 181 69.6
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 1.8e-59 233.0 186 67.7
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 1.8e-59 233.0 181 70.2
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 2.4e-59 232.6 181 67.4
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 2.4e-59 232.6 181 69.1
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 2.4e-59 232.6 181 69.6
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 3.1e-59 232.3 184 67.4
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 3.1e-59 232.3 190 66.8
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 5.3e-59 231.5 178 66.9
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 6.9e-59 231.1 202 62.9
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 6.9e-59 231.1 203 64.5
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 9.0e-59 230.7 181 69.1
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 1.5e-58 229.9 181 66.9
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 1.5e-58 229.9 183 66.1
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 1.3e-57 226.9 183 67.2
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.3e-57 226.9 182 67.0
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.3e-57 226.9 179 67.6
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 1.3e-57 226.9 180 68.9
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 1.3e-57 226.9 182 67.0
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 1.7e-57 226.5 182 67.0
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 2.2e-57 226.1 182 67.0
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 2.2e-57 226.1 181 65.7
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 4.9e-57 224.9 182 64.8
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 4.9e-57 224.9 181 65.2
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 4.9e-57 224.9 181 65.2
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 6.5e-57 224.6 175 67.4
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 1.4e-56 223.4 180 66.1
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 1.9e-56 223.0 181 68.0
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 2.5e-56 222.6 180 67.2
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 3.2e-56 222.2 172 68.0
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.2e-56 222.2 182 65.9
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.2e-56 222.2 182 65.9
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 7.1e-56 221.1 172 67.4
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 7.1e-56 221.1 180 67.2
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.2e-55 220.3 205 60.5
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 4.6e-55 218.4 181 65.2
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 6.0e-55 218.0 176 66.5
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 7.9e-55 217.6 175 65.7
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.3e-54 216.9 180 65.6
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 1.8e-54 216.5 181 64.6
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 1.8e-54 216.5 161 68.3
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 2.3e-54 216.1 178 66.9
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.5e-53 213.4 201 59.7
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 1.9e-53 213.0 147 73.5
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.9e-53 213.0 180 65.0
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 2.5e-53 212.6 193 59.1
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 4.3e-53 211.8 182 62.1
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 5.7e-53 211.5 201 60.2
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 9.6e-53 210.7 201 59.2
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 7.6e-50 201.1 164 66.5
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 5.5e-48 194.9 137 73.0
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 2.3e-46 189.5 177 54.8
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 8.7e-46 187.6 154 63.0
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 9.7e-45 184.1 183 56.8
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 1.3e-44 183.7 181 56.9
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 1.3e-44 183.7 175 60.6
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 2.6e-42 176.0 230 48.3
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 4.2e-40 168.7 163 58.3
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 3.6e-39 165.6 140 65.7
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 3.3e-37 159.1 182 47.8
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 8.5e-33 144.4 122 64.8
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 2.5e-32 142.9 187 44.9
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 3.2e-32 142.5 93 77.4
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 3.2e-32 142.5 152 53.3
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.0e-30 137.5 88 76.1
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 5.3e-27 125.2 159 46.5
Cfa016005 Carpinus fangiana HOM05D005614 ORTHO05D006759 2.3e-22 109.8 58 93.1
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 3.7e-20 102.4 91 61.5
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 6.3e-20 101.7 188 34.0
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 1.7e-17 93.6 102 52.0
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.0e-14 84.3 85 56.5
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 5.7e-13 78.6 47 76.6
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 9.8e-13 77.8 84 53.6
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 4.2e-08 62.4 143 29.4
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 1.0e-06 57.8 33 81.8
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.8e-06 57.0 33 78.8


User provided reference genes

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