Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 0.0e+00 2084.7 1056 100.0
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 0.0e+00 1139.0 1182 57.4
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 5.3e-297 1024.6 1108 56.3
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 1.7e-178 630.9 1180 39.8
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 7.4e-166 589.0 1187 37.3
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 9.7e-166 588.6 1185 37.6
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 5.3e-164 582.8 1430 34.5
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 2.0e-163 580.9 1130 37.4
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 2.2e-162 577.4 1186 36.3
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 2.1e-160 570.9 1221 36.1
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 2.7e-160 570.5 1375 34.3
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 2.0e-158 564.3 1461 32.8
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.1e-156 556.6 1211 36.1
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 5.0e-154 549.7 1216 35.9
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.5e-153 548.1 1135 36.6
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 7.2e-153 545.8 1189 37.5
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.8e-149 533.9 1216 35.5
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 3.5e-147 526.9 1223 34.9
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 1.7e-146 524.6 1476 32.2
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 8.6e-146 522.3 1214 35.3
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 5.5e-145 519.6 1242 35.5
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 5.5e-145 519.6 1242 35.5
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 5.2e-143 513.1 1462 31.8
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 6.8e-143 512.7 1178 35.2
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 8.8e-143 512.3 1230 34.3
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 1.7e-141 508.1 1287 34.3
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 1.8e-140 504.6 1387 31.9
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 4.1e-140 503.4 1434 32.0
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 2.9e-138 497.3 1171 34.7
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 2.5e-137 494.2 680 47.5
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 8.0e-136 489.2 673 48.0
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 1.4e-135 488.4 1582 29.7
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 2.0e-134 484.6 1438 30.6
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 1.3e-133 481.9 1193 33.7
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 6.4e-133 479.6 1467 31.2
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 1.1e-132 478.8 1479 30.0
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 2.3e-130 471.1 744 44.0
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 3.0e-130 470.7 1474 30.3
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 2.8e-128 464.2 1473 29.5
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 2.8e-128 464.2 1489 29.1
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 3.6e-128 463.8 1127 33.2
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 8.0e-128 462.6 1134 33.0
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 4.4e-126 456.8 1166 33.2
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 2.2e-125 454.5 718 42.8
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 8.3e-125 452.6 734 43.1
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 1.1e-124 452.2 1451 30.1
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 2.4e-124 451.1 1477 29.1
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 9.2e-124 449.1 1289 31.5
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 1.7e-122 444.9 1405 30.5
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 3.0e-122 444.1 1546 29.0
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.7e-120 436.8 808 40.2
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 8.1e-120 436.0 1118 33.1
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 4.0e-119 433.7 1454 29.4
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 6.8e-119 433.0 1373 30.7
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 8.9e-119 432.6 1114 32.9
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 2.0e-118 431.4 1472 29.1
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 4.9e-117 426.8 1480 29.2
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 2.1e-115 421.4 1527 28.6
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 3.5e-115 420.6 1458 28.7
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 4.6e-115 420.2 1213 30.7
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 2.3e-114 417.9 1454 29.3
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 1.5e-113 415.2 1485 30.2
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 2.8e-112 411.0 1454 29.4
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 3.1e-111 407.5 674 42.1
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 3.4e-110 404.1 670 41.2
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 3.8e-109 400.6 644 42.4
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 1.6e-107 395.2 738 38.9
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 2.1e-107 394.8 1431 29.1
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 8.7e-106 389.4 1410 27.6
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 1.9e-105 388.3 724 40.7
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 1.1e-103 382.5 1422 27.6
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 2.4e-103 381.3 728 39.8
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 9.0e-103 379.4 674 38.9
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 8.4e-101 372.9 1457 28.2
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 1.9e-100 371.7 650 40.6
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 2.4e-100 371.3 1116 31.4
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 2.1e-99 368.2 1449 27.7
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 7.8e-99 366.3 694 37.3
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 1.3e-98 365.5 1471 28.1
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 8.7e-98 362.8 722 36.4
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 8.1e-96 356.3 1446 27.1
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 3.1e-95 354.4 1467 27.3
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 4.0e-95 354.0 1011 31.1
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 5.3e-95 353.6 1459 27.2
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 9.0e-95 352.8 667 37.3
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 1.5e-94 352.1 1445 27.8
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 1.5e-94 352.1 682 38.1
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 1.5e-94 352.1 682 38.1
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 4.5e-94 350.5 708 36.9
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 7.6e-94 349.7 730 37.3
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 2.2e-93 348.2 679 38.1
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 3.8e-93 347.4 725 37.5
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 1.9e-92 345.1 699 37.8
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 1.0e-90 339.3 694 36.5
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 4.3e-81 307.4 1153 27.5
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 3.1e-79 301.2 819 32.0
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 6.9e-71 273.5 647 33.2
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 1.7e-64 252.3 668 32.6
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 6.7e-58 230.3 1090 25.3
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 6.3e-56 223.8 229 56.3
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 3.2e-52 211.5 504 34.5
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 1.3e-48 199.5 547 34.0
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 8.2e-48 196.8 839 26.7
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 1.2e-46 193.0 488 34.4
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 1.9e-44 185.7 576 28.6
Haze_13711 Corylus avellana HOM05D005579 ORTHO05D006775 3.6e-43 181.4 412 33.0
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 7.5e-41 173.7 232 42.2
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 1.4e-39 169.5 184 51.6
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 2.0e-30 139.0 229 36.7
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 8.6e-29 133.7 606 26.4
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 4.2e-28 131.3 236 36.0
Ca_25744_v3 Cicer arietinum L. HOM05D005579 ORTHO05D006775 1.6e-22 112.8 266 32.3
MBI17_g46331_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.5e-17 96.3 148 40.5
CBR_g61457 Chara braunii HOM05D005579 ORTHO05D006775 1.4e-10 73.2 145 33.8
SEGI_30883 Sequoiadendron giganteum HOM05D005579 ORTHO05D006775 6.4e-08 64.3 280 24.3


User provided reference genes

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