Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0439891 Helianthus annuus HOM05D003704 ORTHO05D005892 9.2e-153 543.5 272 100.0
HanXRQChr17g0564051 Helianthus annuus HOM05D003704 ORTHO05D005892 3.5e-144 515.0 259 99.2
ECA234G1951 Erigeron canadensis HOM05D003704 ORTHO05D005892 3.1e-140 501.9 259 96.1
Lsat_1_v5_gn_4_29820 Lactuca sativa HOM05D003704 ORTHO05D005892 2.4e-137 492.3 258 93.4
Hund15714 Selenicereus undatus HOM05D003704 ORTHO05D005892 1.4e-132 476.5 259 90.0
Lj2A1006G35 Lonicera japonica HOM05D003704 ORTHO05D005892 3.1e-132 475.3 258 89.9
Manes.04G164800 Manihot esculenta HOM05D003704 ORTHO05D005892 5.3e-132 474.6 258 89.9
QL04p013824 Quercus lobata HOM05D003704 ORTHO05D005892 5.3e-132 474.6 259 90.3
CiPaw.13G011100 Carya illinoinensis HOM05D003704 ORTHO05D005892 6.9e-132 474.2 259 90.0
CAN.G1571.5 Capsicum annuum HOM05D003704 ORTHO05D005892 1.2e-131 473.4 259 89.6
Cc02_g29160 Coffea canephora HOM05D003704 ORTHO05D005892 1.5e-131 473.0 259 90.7
Solyc01g068480.4 Solanum lycopersicum HOM05D003704 ORTHO05D005892 2.6e-131 472.2 259 89.2
Sopen01g030440 Solanum pennellii HOM05D003704 ORTHO05D005892 2.6e-131 472.2 259 89.2
TWI15G0657 Tripterygium wilfordii HOM05D003704 ORTHO05D005892 3.4e-131 471.9 259 89.2
vmacro12686 Vaccinium macrocarpon HOM05D003704 ORTHO05D005892 5.8e-131 471.1 259 87.6
SGA_v2.0_scaffold5G02930 Striga asiatica HOM05D003704 ORTHO05D005892 7.6e-131 470.7 258 89.1
Peaxi162Scf00309g00333 Petunia axillaris HOM05D003704 ORTHO05D005892 1.3e-130 469.9 259 88.8
Actinidia21525 Actinidia chinensis HOM05D003704 ORTHO05D005892 2.9e-130 468.8 259 88.0
Dinv32045 Davidia involucrata HOM05D003704 ORTHO05D005892 2.9e-130 468.8 258 89.5
Cfa010865 Carpinus fangiana HOM05D003704 ORTHO05D005892 3.8e-130 468.4 259 89.2
Eucgr.G03254 Eucalyptus grandis HOM05D003704 ORTHO05D005892 4.9e-130 468.0 259 87.6
PGR142G1874 Punica granatum HOM05D003704 ORTHO05D005892 4.9e-130 468.0 259 86.9
Nitab4.5_0001888g0060 Nicotiana tabacum HOM05D003704 ORTHO05D005892 6.4e-130 467.6 259 88.4
Potri.003G201200 Populus trichocarpa HOM05D003704 ORTHO05D005892 8.4e-130 467.2 258 87.6
Nn5g29073 Nelumbo nucifera HOM05D003704 ORTHO05D005892 1.1e-129 466.8 258 88.4
Sc11g0006670 Simmondsia chinensis HOM05D003704 ORTHO05D005892 1.1e-129 466.8 259 87.6
Thecc.05G198600 Theobroma cacao HOM05D003704 ORTHO05D005892 1.1e-129 466.8 259 88.4
ClCG05G020780 Citrullus lanatus HOM05D003704 ORTHO05D005892 1.4e-129 466.5 258 88.4
Rhsim01G0123500 Rhododendron simsii HOM05D003704 ORTHO05D005892 1.4e-129 466.5 259 87.6
Haze_03082 Corylus avellana HOM05D003704 ORTHO05D005892 1.9e-129 466.1 259 88.8
Migut.N01826 Erythranthe guttata HOM05D003704 ORTHO05D005892 2.4e-129 465.7 259 88.0
CSS0035088 Camellia sinensis var. sinensis HOM05D003704 ORTHO05D005892 3.2e-129 465.3 259 87.6
Nitab4.5_0000316g0110 Nicotiana tabacum HOM05D003704 ORTHO05D005892 3.2e-129 465.3 259 88.0
CDE02G2053 Ceratophyllum demersum HOM05D003704 ORTHO05D005892 5.5e-129 464.5 259 86.9
MELO3C012449.2 Cucumis melo HOM05D003704 ORTHO05D005892 7.1e-129 464.2 259 87.6
CsaV3_5G036520 Cucumis sativus L. HOM05D003704 ORTHO05D005892 7.1e-129 464.2 259 87.6
Atru.chr11.2491 Acer truncatum HOM05D003704 ORTHO05D005892 1.2e-128 463.4 258 87.2
Atru.chr11.2463 Acer truncatum HOM05D003704 ORTHO05D005892 1.6e-128 463.0 258 87.2
MSTRG.28042 Avicennia marina HOM05D003704 ORTHO05D005892 1.6e-128 463.0 259 86.5
TAR628G1325 Trochodendron aralioides HOM05D003704 ORTHO05D005892 1.6e-128 463.0 259 86.9
Ah.12g065080 Amaranthus hybridus HOM05D003704 ORTHO05D005892 2.1e-128 462.6 259 86.5
arahy.Tifrunner.gnm1.ann1.RZB3JM Arachis hypogaea HOM05D003704 ORTHO05D005892 2.7e-128 462.2 259 86.9
AUR62026830 Chenopodium quinoa HOM05D003704 ORTHO05D005892 2.7e-128 462.2 259 85.7
Duzib128G1318 Durio zibethinus HOM05D003704 ORTHO05D005892 2.7e-128 462.2 259 87.3
Gohir.A08G225100 Gossypium hirsutum HOM05D003704 ORTHO05D005892 2.7e-128 462.2 259 85.3
AUR62037223 Chenopodium quinoa HOM05D003704 ORTHO05D005892 6.0e-128 461.1 259 84.9
Ciclev10030496m.g Citrus clementina HOM05D003704 ORTHO05D005892 6.0e-128 461.1 259 87.3
Sabra03G0148800 Salix brachista HOM05D003704 ORTHO05D005892 6.0e-128 461.1 258 85.7
Gorai.004G262000 Gossypium raimondii HOM05D003704 ORTHO05D005892 7.9e-128 460.7 259 85.3
EL10Ac2g02849 Beta vulgaris HOM05D003704 ORTHO05D005892 1.3e-127 459.9 259 86.1
Prupe.2G030100 Prunus persica HOM05D003704 ORTHO05D005892 3.9e-127 458.4 257 86.4
Lalb_Chr17g0337761 Lupinus albus HOM05D003704 ORTHO05D005892 6.7e-127 457.6 257 87.5
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 6.7e-127 457.6 259 86.9
Phvul.003G001700 Phaseolus vulgaris HOM05D003704 ORTHO05D005892 1.5e-126 456.4 257 87.2
arahy.Tifrunner.gnm1.ann1.75MG08 Arachis hypogaea HOM05D003704 ORTHO05D005892 2.5e-126 455.7 259 86.1
MD07G1033300 Malus domestica HOM05D003704 ORTHO05D005892 3.3e-126 455.3 257 86.8
Sed0025295 Sechium edule HOM05D003704 ORTHO05D005892 4.3e-126 454.9 259 85.7
DCAR_003239 Daucus carota HOM05D003704 ORTHO05D005892 5.6e-126 454.5 258 85.7
VMungo0251G0473 Vigna mungo HOM05D003704 ORTHO05D005892 5.6e-126 454.5 257 86.4
Glyma.20G000700 Glycine max HOM05D003704 ORTHO05D005892 2.1e-125 452.6 257 86.0
Lj2g0008107 Lotus japonicus HOM05D003704 ORTHO05D005892 4.8e-125 451.4 259 84.9
Ca_12375_v3 Cicer arietinum L. HOM05D003704 ORTHO05D005892 6.2e-125 451.1 257 85.6
CANSAT64G2305 Cannabis sativa HOM05D003704 ORTHO05D005892 1.1e-124 450.3 259 84.6
PSO541G6018 Papaver somniferum HOM05D003704 ORTHO05D005892 1.1e-124 450.3 259 83.8
PSO781G0253 Papaver somniferum HOM05D003704 ORTHO05D005892 1.1e-124 450.3 259 83.8
FAN03G0678 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.4e-124 449.9 259 84.9
FAN06G0794 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.4e-124 449.9 259 84.9
FvH4_7g02390 Fragaria vesca HOM05D003704 ORTHO05D005892 4.0e-124 448.4 259 84.6
FAN10G3548 Fragaria x ananassa HOM05D003704 ORTHO05D005892 5.3e-124 448.0 259 84.6
Glyma.09G285300 Glycine max HOM05D003704 ORTHO05D005892 6.9e-124 447.6 257 84.8
Medtr1g038815 Medicago truncatula HOM05D003704 ORTHO05D005892 9.0e-124 447.2 257 84.8
RcHm_v2.0_Chr1g0319731 Rosa chinensis HOM05D003704 ORTHO05D005892 9.0e-124 447.2 259 84.9
Aa31LG5G20910 Aethionema arabicum HOM05D003704 ORTHO05D005892 1.2e-123 446.8 259 82.6
FAN01G0955 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.2e-123 446.8 259 84.6
ATR0564G498 Amborella trichopoda HOM05D003704 ORTHO05D005892 2.6e-123 445.7 259 84.2
Aqoxy1G04161 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 3.4e-123 445.3 259 83.8
MBI05_g32455_MAGBIO Magnolia biondii HOM05D003704 ORTHO05D005892 3.4e-123 445.3 258 84.5
TPR.G35533 Trifolium pratense HOM05D003704 ORTHO05D005892 5.8e-123 444.5 257 84.0
unitig_21.g20277 Utricularia gibba HOM05D003704 ORTHO05D005892 1.3e-122 443.4 258 83.7
THA.LOC104801743 Tarenaya hassleriana HOM05D003704 ORTHO05D005892 2.9e-122 442.2 259 83.4
Psat6g100680 Pisum sativum HOM05D003704 ORTHO05D005892 1.4e-121 439.9 257 82.9
AL4G36070 Arabidopsis lyrata HOM05D003704 ORTHO05D005892 1.9e-121 439.5 258 81.8
Zm00001eb018810 Zea mays HOM05D003704 ORTHO05D005892 3.2e-121 438.7 256 84.0
AT2G38770 Arabidopsis thaliana HOM05D003704 ORTHO05D005892 4.2e-121 438.3 258 81.8
C04p08870 Brassica napus HOM05D003704 ORTHO05D005892 5.5e-121 438.0 258 81.4
Thhalv10016138m.g Eutrema salsugineum HOM05D003704 ORTHO05D005892 7.1e-121 437.6 258 81.0
CARHR133480 Cardamine hirsuta HOM05D003704 ORTHO05D005892 9.3e-121 437.2 258 82.2
BolC4t22475H Brassica oleracea HOM05D003704 ORTHO05D005892 1.2e-120 436.8 258 81.0
BcaNung07214 Brassica carinata HOM05D003704 ORTHO05D005892 1.6e-120 436.4 258 81.0
A05p07400 Brassica napus HOM05D003704 ORTHO05D005892 1.6e-120 436.4 258 81.0
BcaB02g09152 Brassica carinata HOM05D003704 ORTHO05D005892 2.1e-120 436.0 258 81.0
BraA05t19706Z Brassica rapa HOM05D003704 ORTHO05D005892 2.1e-120 436.0 258 81.0
Carub.0004s2079 Capsella rubella HOM05D003704 ORTHO05D005892 2.7e-120 435.6 258 80.6
BcaC02g07445 Brassica carinata HOM05D003704 ORTHO05D005892 4.6e-120 434.9 259 80.3
BolC4t28191H Brassica oleracea HOM05D003704 ORTHO05D005892 4.6e-120 434.9 259 80.3
C04p66890 Brassica napus HOM05D003704 ORTHO05D005892 6.0e-120 434.5 259 80.3
Sp4g21160 Schrenkiella parvula HOM05D003704 ORTHO05D005892 6.0e-120 434.5 258 80.2
Migut.O00529 Erythranthe guttata HOM05D003704 ORTHO05D005892 4.1e-116 421.8 230 90.0
Cpa.g.sc2782.1 Carica papaya HOM05D003704 ORTHO05D005892 8.2e-101 370.9 203 89.7
HPP92_001562 Vanilla planifolia HOM05D003704 ORTHO05D005892 2.4e-100 369.4 259 71.8
MD02G1293400 Malus domestica HOM05D003704 ORTHO05D005892 7.7e-99 364.4 257 74.3
Mapoly0170s0020 Marchantia polymorpha HOM05D003704 ORTHO05D005892 8.5e-98 360.9 259 68.7
AagrBONN_evm.TU.Sc2ySwM_344.1100 Anthoceros agrestis HOM05D003704 ORTHO05D005892 1.4e-97 360.1 257 66.9
QL01p034778 Quercus lobata HOM05D003704 ORTHO05D005892 5.7e-94 348.2 203 84.7
Oeu003918.1 Olea europaea HOM05D003704 ORTHO05D005892 1.3e-90 337.0 216 80.6
SMO230G0016 Selaginella moellendorffii HOM05D003704 ORTHO05D005892 2.3e-87 326.2 256 62.5
SEGI_35696 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 4.4e-86 322.0 195 78.5
CBR_g49869 Chara braunii HOM05D003704 ORTHO05D005892 4.8e-85 318.5 256 61.3
Pp3c21_9820 Physcomitrium patens HOM05D003704 ORTHO05D005892 5.3e-84 315.1 256 60.9
GSVIVG01000835001 Vitis vinifera HOM05D003704 ORTHO05D005892 3.6e-80 302.4 166 88.6
GSVIVG01029933001 Vitis vinifera HOM05D003704 ORTHO05D005892 8.0e-80 301.2 166 88.6
Gohir.D08G245500 Gossypium hirsutum HOM05D003704 ORTHO05D005892 8.0e-72 274.6 149 87.2
Aqoxy263s004 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 1.8e-71 273.5 149 87.2
Cre06.g300750 Chlamydomonas reinhardtii HOM05D003704 ORTHO05D005892 4.0e-71 272.3 253 50.6
MCO01G629 Micromonas commoda HOM05D003704 ORTHO05D005892 3.7e-61 239.2 265 47.9
QL07p028220 Quercus lobata HOM05D003704 ORTHO05D005892 6.0e-51 205.3 259 47.9
PRCOL_00007279 Prasinoderma coloniale HOM05D003704 ORTHO05D005892 1.0e-42 177.9 269 38.7
Gohir.D08G245550 Gossypium hirsutum HOM05D003704 ORTHO05D005892 3.5e-35 152.9 97 74.2
Aqoxy263s005 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 7.3e-33 145.2 95 74.7
Cfa026287 Carpinus fangiana HOM05D003704 ORTHO05D005892 1.1e-31 141.4 261 33.7
Cpa.g.c47396 Carica papaya HOM05D003704 ORTHO05D005892 8.4e-21 105.1 63 77.8
Haze_26754 Corylus avellana HOM05D003704 ORTHO05D005892 5.4e-20 102.4 104 46.2
SGA_v2.0_scaffold354G49736 Striga asiatica HOM05D003704 ORTHO05D005892 6.0e-19 99.0 60 78.3
BraA04t18425Z Brassica rapa HOM05D003704 ORTHO05D005892 1.3e-16 91.3 69 58.0
SEGI_24800 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 6.2e-16 89.0 64 64.1
SMO230G0104 Selaginella moellendorffii HOM05D003704 ORTHO05D013439 4.8e-08 62.8 59 54.2
RcHm_v2.0_Chr1g0320421 Rosa chinensis HOM05D003704 ORTHO05D017707 2.6e-06 57.0 36 69.4


User provided reference genes

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