Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0404811 Helianthus annuus HOM05D006183 ORTHO05D007844 1.0e-54 216.5 105 100.0
HanXRQChr14g0442591 Helianthus annuus HOM05D006183 ORTHO05D007844 8.8e-43 176.8 85 97.6
Hund18298 Selenicereus undatus HOM05D006183 ORTHO05D007844 5.0e-14 81.3 60 60.0
QL09p042323 Quercus lobata HOM05D006183 ORTHO05D007844 6.5e-14 80.9 60 60.0
Ca_08753_v3 Cicer arietinum L. HOM05D006183 ORTHO05D007844 1.1e-13 80.1 60 63.3
Hma1.2p1_2051F.1_g312550 Hydrangea macrophylla HOM05D006183 ORTHO05D007844 1.1e-13 80.1 60 58.3
Medtr7g098900 Medicago truncatula HOM05D006183 ORTHO05D007844 1.5e-13 79.7 60 61.7
THA.LOC104814536 Tarenaya hassleriana HOM05D006183 ORTHO05D007844 1.5e-13 79.7 66 59.1
arahy.Tifrunner.gnm1.ann1.73B1UV Arachis hypogaea HOM05D006183 ORTHO05D007844 1.9e-13 79.3 60 61.7
arahy.Tifrunner.gnm1.ann1.P69TYL Arachis hypogaea HOM05D006183 ORTHO05D007844 1.9e-13 79.3 60 61.7
Ciclev10019299m.g Citrus clementina HOM05D006183 ORTHO05D007844 2.5e-13 79.0 60 58.3
ECA248G2561 Erigeron canadensis HOM05D006183 ORTHO05D007844 2.5e-13 79.0 66 60.6
Glyma.19G169500 Glycine max HOM05D006183 ORTHO05D007844 3.2e-13 78.6 60 61.7
Phvul.001G166600 Phaseolus vulgaris HOM05D006183 ORTHO05D007844 3.2e-13 78.6 60 61.7
Psat3g051320 Pisum sativum HOM05D006183 ORTHO05D007844 3.2e-13 78.6 60 61.7
Solyc06g008110.4 Solanum lycopersicum HOM05D006183 ORTHO05D007844 3.2e-13 78.6 60 60.0
Sopen06g002920 Solanum pennellii HOM05D006183 ORTHO05D007844 3.2e-13 78.6 74 52.7
PGSC0003DMG400014711 Solanum tuberosum HOM05D006183 ORTHO05D007844 3.2e-13 78.6 60 60.0
VMungo1383G1346 Vigna mungo HOM05D006183 ORTHO05D007844 3.2e-13 78.6 60 61.7
Actinidia37559 Actinidia chinensis HOM05D006183 ORTHO05D007844 4.2e-13 78.2 60 60.0
Aa31LG8G17320 Aethionema arabicum HOM05D006183 ORTHO05D007844 4.2e-13 78.2 66 60.6
Migut.D00486 Erythranthe guttata HOM05D006183 ORTHO05D007844 4.2e-13 78.2 60 58.3
Lalb_Chr20g0113511 Lupinus albus HOM05D006183 ORTHO05D007844 4.2e-13 78.2 74 52.7
MD10G1174900 Malus domestica HOM05D006183 ORTHO05D007844 4.2e-13 78.2 74 52.7
Peaxi162Scf00499g00067 Petunia axillaris HOM05D006183 ORTHO05D007844 4.2e-13 78.2 66 57.6
TPR.G20058 Trifolium pratense HOM05D006183 ORTHO05D007844 4.2e-13 78.2 60 61.7
vmacro02713 Vaccinium macrocarpon HOM05D006183 ORTHO05D007844 4.2e-13 78.2 60 60.0
AT2G20330 Arabidopsis thaliana HOM05D006183 ORTHO05D007844 5.5e-13 77.8 66 59.1
BcaB03g16820 Brassica carinata HOM05D006183 ORTHO05D007844 5.5e-13 77.8 74 55.4
A07p00380 Brassica napus HOM05D006183 ORTHO05D007844 5.5e-13 77.8 74 55.4
BraA07t27830Z Brassica rapa HOM05D006183 ORTHO05D007844 5.5e-13 77.8 74 55.4
Carub.0003s3467 Capsella rubella HOM05D006183 ORTHO05D007844 5.5e-13 77.8 66 59.1
MELO3C012834.2 Cucumis melo HOM05D006183 ORTHO05D007844 5.5e-13 77.8 60 58.3
CsaV3_3G028460 Cucumis sativus L. HOM05D006183 ORTHO05D007844 5.5e-13 77.8 60 58.3
MD05G1186900 Malus domestica HOM05D006183 ORTHO05D007844 5.5e-13 77.8 59 64.4
PGR044G1356 Punica granatum HOM05D006183 ORTHO05D007844 5.5e-13 77.8 60 55.0
Sed0027453 Sechium edule HOM05D006183 ORTHO05D007844 5.5e-13 77.8 60 58.3
Sc17g0002990 Simmondsia chinensis HOM05D006183 ORTHO05D007844 5.5e-13 77.8 66 59.1
EL10Ac7g17706 Beta vulgaris HOM05D006183 ORTHO05D007844 7.2e-13 77.4 60 58.3
Dinv43057 Davidia involucrata HOM05D006183 ORTHO05D007844 7.2e-13 77.4 60 58.3
Potri.014G193500 Populus trichocarpa HOM05D006183 ORTHO05D007844 7.2e-13 77.4 60 60.0
Sabra14G0143600 Salix brachista HOM05D006183 ORTHO05D007844 7.2e-13 77.4 60 60.0
Actinidia30118 Actinidia chinensis HOM05D006183 ORTHO05D007844 9.5e-13 77.0 58 60.3
BcaC06g36716 Brassica carinata HOM05D006183 ORTHO05D007844 9.5e-13 77.0 74 51.4
C07p00800 Brassica napus HOM05D006183 ORTHO05D007844 9.5e-13 77.0 74 51.4
BolC7t40519H Brassica oleracea HOM05D006183 ORTHO05D007844 9.5e-13 77.0 74 51.4
Dinv19261 Davidia involucrata HOM05D006183 ORTHO05D007844 9.5e-13 77.0 60 60.0
Lj1A75T44 Lonicera japonica HOM05D006183 ORTHO05D007844 9.5e-13 77.0 74 51.4
Prupe.8G213600 Prunus persica HOM05D006183 ORTHO05D007844 9.5e-13 77.0 60 58.3
Rhsim13G0040400 Rhododendron simsii HOM05D006183 ORTHO05D007844 9.5e-13 77.0 60 58.3
MSTRG.18360 Avicennia marina HOM05D006183 ORTHO05D007844 1.2e-12 76.6 60 58.3
Lj1A75T45 Lonicera japonica HOM05D006183 ORTHO05D007844 1.2e-12 76.6 74 51.4
Nitab4.5_0009671g0010 Nicotiana tabacum HOM05D006183 ORTHO05D007844 1.2e-12 76.6 60 58.3
AL3G53280 Arabidopsis lyrata HOM05D006183 ORTHO05D007844 1.6e-12 76.3 66 57.6
Cpa.g.sc87.44 Carica papaya HOM05D006183 ORTHO05D007844 1.6e-12 76.3 60 58.3
Eucgr.K01415 Eucalyptus grandis HOM05D006183 ORTHO05D007844 1.6e-12 76.3 60 58.3
Thhalv10001927m.g Eutrema salsugineum HOM05D006183 ORTHO05D007844 1.6e-12 76.3 66 57.6
SHI26778 Sapria himalayana HOM05D006183 ORTHO05D007844 1.6e-12 76.3 70 47.1
Sp3g33570 Schrenkiella parvula HOM05D006183 ORTHO05D007844 1.6e-12 76.3 66 57.6
Atru.chr5.1959 Acer truncatum HOM05D006183 ORTHO05D007844 2.1e-12 75.9 74 51.4
Aqoxy5G00112 Aquilegia oxysepala HOM05D006183 ORTHO05D007844 2.1e-12 75.9 63 57.1
Cc01_g17710 Coffea canephora HOM05D006183 ORTHO05D007844 2.1e-12 75.9 60 58.3
Gohir.A07G203800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 2.1e-12 75.9 60 56.7
Gohir.D07G209800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 2.1e-12 75.9 60 56.7
Gorai.001G237200 Gossypium raimondii HOM05D006183 ORTHO05D007844 2.1e-12 75.9 60 56.7
Manes.13G038900 Manihot esculenta HOM05D006183 ORTHO05D007844 2.1e-12 75.9 60 56.7
SGA_v2.0_scaffold1G00669 Striga asiatica HOM05D006183 ORTHO05D007844 2.1e-12 75.9 60 58.3
AUR62008815 Chenopodium quinoa HOM05D006183 ORTHO05D007844 2.7e-12 75.5 75 52.0
RcHm_v2.0_Chr6g0286091 Rosa chinensis HOM05D006183 ORTHO05D007844 2.7e-12 75.5 63 57.1
CARHR110860 Cardamine hirsuta HOM05D006183 ORTHO05D007844 3.6e-12 75.1 74 55.4
ClCG07G001450 Citrullus lanatus HOM05D006183 ORTHO05D007844 3.6e-12 75.1 43 74.4
PSO210G4577 Papaver somniferum HOM05D006183 ORTHO05D007844 3.6e-12 75.1 41 75.6
SalBow4G1671 Salvia bowleyana HOM05D006183 ORTHO05D007844 3.6e-12 75.1 66 51.5
CSS0020724 Camellia sinensis var. sinensis HOM05D006183 ORTHO05D007844 4.7e-12 74.7 60 58.3
Cfa002493 Carpinus fangiana HOM05D006183 ORTHO05D007844 4.7e-12 74.7 74 51.4
FvH4_2g20290 Fragaria vesca HOM05D006183 ORTHO05D007844 4.7e-12 74.7 60 56.7
FAN15G0492 Fragaria x ananassa HOM05D006183 ORTHO05D007844 4.7e-12 74.7 60 56.7
FAN24G0209 Fragaria x ananassa HOM05D006183 ORTHO05D007844 4.7e-12 74.7 60 56.7
FAN27G0957 Fragaria x ananassa HOM05D006183 ORTHO05D007844 4.7e-12 74.7 60 56.7
HanXRQChr03g0066991 Helianthus annuus HOM05D006183 ORTHO05D007844 4.7e-12 74.7 60 60.0
TAR636G3003 Trochodendron aralioides HOM05D006183 ORTHO05D007844 4.7e-12 74.7 60 55.0
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 6.1e-12 74.3 66 57.6
Nitab4.5_0000326g0320 Nicotiana tabacum HOM05D006183 ORTHO05D007844 6.1e-12 74.3 60 56.7
CiPaw.04G191000 Carya illinoinensis HOM05D006183 ORTHO05D007844 8.0e-12 73.9 74 50.0
Haze_24717 Corylus avellana HOM05D006183 ORTHO05D007844 8.0e-12 73.9 74 50.0
Duzib133G1169 Durio zibethinus HOM05D006183 ORTHO05D007844 8.0e-12 73.9 60 55.0
Thecc.01G248600 Theobroma cacao HOM05D006183 ORTHO05D007844 8.0e-12 73.9 60 55.0
GSVIVG01028442001 Vitis vinifera HOM05D006183 ORTHO05D007844 8.0e-12 73.9 60 55.0
Lj1g0002370 Lotus japonicus HOM05D006183 ORTHO05D007844 1.0e-11 73.6 60 56.7
COL.COLO4_20954 Corchorus olitorius HOM05D006183 ORTHO05D007844 1.8e-11 72.8 60 53.3
SEGI_26680 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 3.0e-11 72.0 60 50.0
SEGI_33423 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 3.0e-11 72.0 60 50.0
Lsat_1_v5_gn_5_180141 Lactuca sativa HOM05D006183 ORTHO05D007844 6.8e-11 70.9 60 55.0
DCAR_018527 Daucus carota HOM05D006183 ORTHO05D007844 8.8e-11 70.5 60 51.7
CDE02G0751 Ceratophyllum demersum HOM05D006183 ORTHO05D007844 2.0e-10 69.3 74 51.4
AUR62025425 Chenopodium quinoa HOM05D006183 ORTHO05D007844 2.6e-10 68.9 71 52.1
Zm00001eb222270 Zea mays HOM05D006183 ORTHO05D007844 2.6e-10 68.9 74 45.9
Os10g0464100 Oryza sativa ssp. japonica HOM05D006183 ORTHO05D007844 3.4e-10 68.6 74 45.9
ATR0751G065 Amborella trichopoda HOM05D006183 ORTHO05D007844 1.3e-09 66.6 40 65.0
HPP92_025390 Vanilla planifolia HOM05D006183 ORTHO05D007844 2.8e-09 65.5 74 44.6
AagrBONN_evm.TU.Sc2ySwM_228.230 Anthoceros agrestis HOM05D006183 ORTHO05D007844 1.4e-08 63.2 58 46.6
CBR_g29722 Chara braunii HOM05D006183 ORTHO05D007844 1.2e-07 60.1 40 57.5
SHI26811 Sapria himalayana HOM05D006183 ORTHO05D007844 1.7e-06 56.2 41 63.4


User provided reference genes

Program Settings