Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 1.3e-142 510.0 314 100.0
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 9.3e-120 434.1 222 96.4
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 7.9e-119 431.0 222 94.1
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 1.5e-117 426.8 220 93.6
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 1.3e-116 423.7 221 92.8
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 2.2e-116 422.9 220 93.2
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 2.2e-116 422.9 220 93.2
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.8e-116 422.5 220 92.3
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.8e-116 422.5 220 92.3
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 2.8e-116 422.5 220 93.2
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 6.3e-116 421.4 222 91.0
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 8.2e-116 421.0 221 91.4
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 8.2e-116 421.0 220 92.3
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 8.2e-116 421.0 220 92.3
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 1.8e-115 419.9 220 92.3
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 2.4e-115 419.5 221 91.0
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 2.4e-115 419.5 222 91.0
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 2.4e-115 419.5 220 91.8
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 3.1e-115 419.1 220 92.3
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 4.1e-115 418.7 221 91.4
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 5.3e-115 418.3 220 90.9
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 5.3e-115 418.3 220 91.4
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 6.9e-115 417.9 222 92.3
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 6.9e-115 417.9 220 92.3
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 9.0e-115 417.5 220 91.8
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 9.0e-115 417.5 222 90.5
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 2.0e-114 416.4 220 91.8
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 2.0e-114 416.4 222 90.5
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.6e-114 416.0 220 91.8
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.6e-114 416.0 220 91.8
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 2.6e-114 416.0 220 90.5
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 2.6e-114 416.0 220 91.8
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 3.4e-114 415.6 224 91.1
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 3.4e-114 415.6 220 91.4
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 3.4e-114 415.6 220 90.9
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 3.4e-114 415.6 220 90.5
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 3.4e-114 415.6 222 90.5
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 4.5e-114 415.2 219 92.2
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 4.5e-114 415.2 219 92.2
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 4.5e-114 415.2 222 91.9
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 4.5e-114 415.2 220 90.9
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 4.5e-114 415.2 222 90.1
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 5.9e-114 414.8 220 90.5
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 5.9e-114 414.8 220 91.8
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 5.9e-114 414.8 219 91.3
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 5.9e-114 414.8 222 90.5
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 1.3e-113 413.7 220 91.4
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 1.3e-113 413.7 222 90.1
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 1.7e-113 413.3 221 90.5
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 2.9e-113 412.5 220 90.9
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 3.8e-113 412.1 220 90.9
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 5.0e-113 411.8 220 90.9
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 8.5e-113 411.0 219 90.4
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.4e-112 410.2 220 90.0
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 1.4e-112 410.2 220 90.9
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 1.4e-112 410.2 220 90.0
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 1.9e-112 409.8 220 90.0
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.5e-112 409.5 229 88.6
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.5e-112 409.5 229 88.6
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 3.2e-112 409.1 222 88.3
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 4.2e-112 408.7 221 89.1
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 4.2e-112 408.7 221 89.1
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 5.5e-112 408.3 216 90.7
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.2e-111 407.1 232 87.1
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 1.6e-111 406.8 222 88.3
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 2.1e-111 406.4 222 88.3
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 2.1e-111 406.4 220 90.0
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 2.7e-111 406.0 230 87.0
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 2.7e-111 406.0 220 89.1
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 2.7e-111 406.0 220 89.1
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 2.7e-111 406.0 220 89.1
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 3.6e-111 405.6 221 88.7
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 6.1e-111 404.8 222 88.7
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 6.1e-111 404.8 230 87.0
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 6.1e-111 404.8 220 88.6
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 1.4e-110 403.7 220 90.0
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 3.9e-110 402.1 220 89.5
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 8.8e-110 401.0 209 93.3
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 1.1e-109 400.6 222 86.0
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 1.1e-109 400.6 222 86.0
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 1.1e-109 400.6 222 87.8
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 1.5e-109 400.2 222 86.5
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 1.5e-109 400.2 222 86.0
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 1.5e-109 400.2 222 86.0
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 7.4e-109 397.9 222 86.0
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 7.4e-109 397.9 222 86.5
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 7.4e-109 397.9 220 88.2
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 9.7e-109 397.5 241 83.0
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 1.7e-108 396.7 224 85.7
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 4.8e-108 395.2 222 88.7
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 4.8e-108 395.2 222 88.7
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 6.3e-108 394.8 220 87.3
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 9.1e-107 391.0 222 84.2
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 2.2e-105 386.3 219 87.2
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 2.9e-105 386.0 221 85.1
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 5.0e-105 385.2 222 84.7
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 1.4e-104 383.6 290 69.3
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 1.4e-104 383.6 223 84.8
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 1.6e-103 380.2 301 66.8
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 2.7e-103 379.4 216 84.7
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 2.3e-102 376.3 230 80.9
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 1.3e-100 370.5 208 88.5
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 3.7e-100 369.0 221 82.4
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 2.6e-98 362.8 230 80.0
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 2.0e-93 346.7 215 79.1
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 3.8e-89 332.4 342 54.7
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 8.5e-89 331.3 178 88.2
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 7.2e-88 328.2 181 89.5
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 1.4e-86 323.9 208 75.5
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 6.8e-86 321.6 224 74.1
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 1.3e-84 317.4 211 74.4
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 1.5e-77 293.9 221 65.6
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 1.2e-74 284.3 158 86.7
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 1.7e-73 280.4 213 69.5
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 7.3e-72 275.0 189 72.0
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 9.5e-72 274.6 236 65.3
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 1.2e-71 274.2 222 64.9
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 2.3e-70 270.0 548 35.8
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 3.0e-70 269.6 164 81.7
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 1.5e-64 250.8 138 87.7
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 1.8e-62 243.8 132 90.2
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.3e-57 227.6 220 56.8
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 3.6e-55 219.5 189 63.0
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 3.7e-52 209.5 113 86.7
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 8.3e-52 208.4 107 94.4
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 3.2e-51 206.5 108 93.5
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 3.2e-51 206.5 107 94.4
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 3.5e-50 203.0 108 88.9
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 1.0e-49 201.4 113 83.2
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 3.3e-48 196.4 104 90.4
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 3.6e-47 193.0 107 86.9
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 2.3e-46 190.3 107 87.9
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.7e-44 184.1 92 95.7
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 2.1e-42 177.2 95 91.6
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 4.6e-42 176.0 116 75.0
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 1.7e-41 174.1 95 90.5
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.3e-40 169.9 91 85.7
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 4.7e-39 166.0 88 87.5
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 6.2e-39 165.6 116 70.7
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 5.2e-38 162.5 87 87.4
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 1.0e-33 148.3 83 83.1
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 1.6e-31 141.0 71 93.0
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 1.6e-31 141.0 71 93.0
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 5.4e-27 125.9 71 80.3
Psat1g060600 Pisum sativum HOM05D004689 ORTHO05D006269 5.3e-22 109.4 58 87.9
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.2e-18 98.2 70 70.0
Pp3c4_2800 Physcomitrium patens HOM05D004689 ORTHO05D006269 1.3e-17 94.7 119 52.9
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 9.3e-11 72.0 103 47.6
Dinv44323 Davidia involucrata HOM05D004689 ORTHO05D183653 4.6e-10 69.7 38 89.5
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 6.0e-10 69.3 40 75.0
Dinv25427 Davidia involucrata HOM05D004689 ORTHO05D182071 7.9e-10 68.9 38 86.8
Dinv29092 Davidia involucrata HOM05D004689 ORTHO05D185927 4.8e-07 59.7 45 64.4


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