Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0402271 Helianthus annuus HOM05D004298 ORTHO05D006236 1.5e-172 609.4 299 100.0
HanXRQChr14g0452871 Helianthus annuus HOM05D004298 ORTHO05D006236 2.7e-145 518.8 263 97.0
HanXRQChr07g0197541 Helianthus annuus HOM05D004298 ORTHO05D006236 7.8e-145 517.3 263 96.6
ECA238G4788 Erigeron canadensis HOM05D004298 ORTHO05D006236 3.6e-142 508.4 263 94.3
Lsat_1_v5_gn_2_98360 Lactuca sativa HOM05D004298 ORTHO05D006236 4.0e-141 505.0 263 93.5
GSVIVG01025182001 Vitis vinifera HOM05D004298 ORTHO05D006236 9.9e-140 500.4 263 92.0
Sabra09G0008100 Salix brachista HOM05D004298 ORTHO05D006236 2.9e-139 498.8 263 92.0
Hma1.2p1_1031F.1_g250050 Hydrangea macrophylla HOM05D004298 ORTHO05D006236 1.1e-138 496.9 263 91.6
Dinv32749 Davidia involucrata HOM05D004298 ORTHO05D006236 7.1e-138 494.2 263 90.9
Potri.009G013400 Populus trichocarpa HOM05D004298 ORTHO05D006236 7.1e-138 494.2 263 90.9
Peaxi162Scf00270g00819 Petunia axillaris HOM05D004298 ORTHO05D006236 1.2e-137 493.4 263 89.7
CAN.G631.24 Capsicum annuum HOM05D004298 ORTHO05D006236 2.1e-137 492.7 263 90.5
Actinidia03730 Actinidia chinensis HOM05D004298 ORTHO05D006236 2.7e-137 492.3 263 90.1
Manes.04G021700 Manihot esculenta HOM05D004298 ORTHO05D006236 3.5e-137 491.9 263 90.5
Sc06g0010150 Simmondsia chinensis HOM05D004298 ORTHO05D006236 3.5e-137 491.9 263 89.7
Potri.004G210400 Populus trichocarpa HOM05D004298 ORTHO05D006236 4.6e-137 491.5 263 89.7
CSS0023657 Camellia sinensis var. sinensis HOM05D004298 ORTHO05D006236 6.0e-137 491.1 263 89.7
VMungo1080G1181 Vigna mungo HOM05D004298 ORTHO05D006236 6.0e-137 491.1 263 90.1
arahy.Tifrunner.gnm1.ann1.ETHX4E Arachis hypogaea HOM05D004298 ORTHO05D006236 7.8e-137 490.7 263 89.7
arahy.Tifrunner.gnm1.ann1.VBZF8N Arachis hypogaea HOM05D004298 ORTHO05D006236 7.8e-137 490.7 263 89.7
Carub.0008s2128 Capsella rubella HOM05D004298 ORTHO05D006236 7.8e-137 490.7 260 90.8
CSS0023686 Camellia sinensis var. sinensis HOM05D004298 ORTHO05D006236 1.0e-136 490.3 263 89.7
CSS0037274 Camellia sinensis var. sinensis HOM05D004298 ORTHO05D006236 1.0e-136 490.3 263 89.7
MBI07_g19314_MAGBIO Magnolia biondii HOM05D004298 ORTHO05D006236 1.0e-136 490.3 263 90.1
CARHR274260 Cardamine hirsuta HOM05D004298 ORTHO05D006236 1.3e-136 490.0 260 90.4
Phvul.005G135800 Phaseolus vulgaris HOM05D004298 ORTHO05D006236 1.3e-136 490.0 263 90.1
MD11G1135000 Malus domestica HOM05D004298 ORTHO05D006236 1.7e-136 489.6 263 89.4
Rhsim01G0217200 Rhododendron simsii HOM05D004298 ORTHO05D006236 1.7e-136 489.6 263 89.4
TAR633G1103 Trochodendron aralioides HOM05D004298 ORTHO05D006236 1.7e-136 489.6 263 89.7
Lj2C1029T7 Lonicera japonica HOM05D004298 ORTHO05D006236 2.3e-136 489.2 263 90.1
ATR0115G030 Amborella trichopoda HOM05D004298 ORTHO05D006236 3.0e-136 488.8 262 89.7
Cpa.g.sc216.13 Carica papaya HOM05D004298 ORTHO05D006236 3.0e-136 488.8 263 89.4
Cc01_g11160 Coffea canephora HOM05D004298 ORTHO05D006236 3.0e-136 488.8 263 89.4
DCAR_015537 Daucus carota HOM05D004298 ORTHO05D006236 3.0e-136 488.8 263 89.4
Thhalv10012774m.g Eutrema salsugineum HOM05D004298 ORTHO05D006236 3.9e-136 488.4 263 89.7
Nitab4.5_0000650g0220 Nicotiana tabacum HOM05D004298 ORTHO05D006236 3.9e-136 488.4 263 89.0
Sabra04G0142000 Salix brachista HOM05D004298 ORTHO05D006236 3.9e-136 488.4 267 89.1
Actinidia20454 Actinidia chinensis HOM05D004298 ORTHO05D006236 5.1e-136 488.0 263 89.7
Duzib168G1617 Durio zibethinus HOM05D004298 ORTHO05D006236 5.1e-136 488.0 263 88.6
Manes.11G144700 Manihot esculenta HOM05D004298 ORTHO05D006236 5.1e-136 488.0 263 89.4
Nn2g10781 Nelumbo nucifera HOM05D004298 ORTHO05D006236 5.1e-136 488.0 263 90.1
AL8G37190 Arabidopsis lyrata HOM05D004298 ORTHO05D006236 6.6e-136 487.6 260 90.0
Glyma.13G326400 Glycine max HOM05D004298 ORTHO05D006236 6.6e-136 487.6 263 89.0
AT5G60600 Arabidopsis thaliana HOM05D004298 ORTHO05D006236 8.6e-136 487.3 263 89.4
Ca_01417_v3 Cicer arietinum L. HOM05D004298 ORTHO05D006236 8.6e-136 487.3 263 89.0
Ciclev10027881m.g Citrus clementina HOM05D004298 ORTHO05D006236 1.1e-135 486.9 263 89.0
THA.LOC104810855 Tarenaya hassleriana HOM05D004298 ORTHO05D006236 1.1e-135 486.9 263 89.4
PGR102G1912 Punica granatum HOM05D004298 ORTHO05D006236 1.5e-135 486.5 263 88.6
Glyma.12G173200 Glycine max HOM05D004298 ORTHO05D006236 1.9e-135 486.1 263 89.0
FAN25G3839 Fragaria x ananassa HOM05D004298 ORTHO05D006236 2.5e-135 485.7 263 88.6
QL01p022296 Quercus lobata HOM05D004298 ORTHO05D006236 2.5e-135 485.7 263 88.6
TPR.G11486 Trifolium pratense HOM05D004298 ORTHO05D006236 2.5e-135 485.7 263 88.2
Ah.01g014360 Amaranthus hybridus HOM05D004298 ORTHO05D006236 3.3e-135 485.3 263 88.2
FvH4_3g32460 Fragaria vesca HOM05D004298 ORTHO05D006236 3.3e-135 485.3 263 88.6
FAN11G2723 Fragaria x ananassa HOM05D004298 ORTHO05D006236 3.3e-135 485.3 263 88.6
FAN16G0818 Fragaria x ananassa HOM05D004298 ORTHO05D006236 3.3e-135 485.3 263 88.6
Gorai.004G228600 Gossypium raimondii HOM05D004298 ORTHO05D006236 3.3e-135 485.3 263 87.8
A10p17790 Brassica napus HOM05D004298 ORTHO05D006236 4.3e-135 485.0 260 89.6
BraA10t43856Z Brassica rapa HOM05D004298 ORTHO05D006236 4.3e-135 485.0 260 89.6
CDE02G3870 Ceratophyllum demersum HOM05D004298 ORTHO05D006236 4.3e-135 485.0 260 90.0
Aa31LG1G12580 Aethionema arabicum HOM05D004298 ORTHO05D006236 5.6e-135 484.6 263 88.6
MD03G1117300 Malus domestica HOM05D004298 ORTHO05D006236 5.6e-135 484.6 263 88.6
CANSAT54G2863 Cannabis sativa HOM05D004298 ORTHO05D006236 7.3e-135 484.2 263 89.0
CiPaw.13G112600 Carya illinoinensis HOM05D004298 ORTHO05D006236 7.3e-135 484.2 262 88.5
BcaB08g36355 Brassica carinata HOM05D004298 ORTHO05D006236 1.2e-134 483.4 260 89.2
AUR62024990 Chenopodium quinoa HOM05D004298 ORTHO05D006236 1.2e-134 483.4 263 87.5
FAN21G2260 Fragaria x ananassa HOM05D004298 ORTHO05D006236 1.2e-134 483.4 263 88.2
PSO384G0735 Papaver somniferum HOM05D004298 ORTHO05D006236 1.2e-134 483.4 263 88.6
Sp6g22170 Schrenkiella parvula HOM05D004298 ORTHO05D006236 1.2e-134 483.4 260 89.2
BcaC04g19719 Brassica carinata HOM05D004298 ORTHO05D006236 1.6e-134 483.0 260 89.2
Gohir.D08G214700 Gossypium hirsutum HOM05D004298 ORTHO05D006236 1.6e-134 483.0 263 87.5
Thecc.09G340000 Theobroma cacao HOM05D004298 ORTHO05D006236 1.6e-134 483.0 263 87.5
DCAR_006060 Daucus carota HOM05D004298 ORTHO05D006236 2.1e-134 482.6 263 88.2
Medtr2g094160 Medicago truncatula HOM05D004298 ORTHO05D006236 2.1e-134 482.6 263 87.5
PSO339G0771 Papaver somniferum HOM05D004298 ORTHO05D006236 2.1e-134 482.6 263 88.2
EL10Ac9g22507 Beta vulgaris HOM05D004298 ORTHO05D006236 2.8e-134 482.3 263 86.7
CiPaw.14G080300 Carya illinoinensis HOM05D004298 ORTHO05D006236 2.8e-134 482.3 263 87.8
Psat5g278240 Pisum sativum HOM05D004298 ORTHO05D006236 2.8e-134 482.3 263 89.0
Prupe.6G101000 Prunus persica HOM05D004298 ORTHO05D006236 2.8e-134 482.3 263 88.2
Solyc11g069380.2 Solanum lycopersicum HOM05D004298 ORTHO05D006236 2.8e-134 482.3 263 88.2
Sopen11g028100 Solanum pennellii HOM05D004298 ORTHO05D006236 2.8e-134 482.3 263 88.2
PGSC0003DMG400008050 Solanum tuberosum HOM05D004298 ORTHO05D006236 3.6e-134 481.9 263 88.6
C09p53300 Brassica napus HOM05D004298 ORTHO05D006236 4.7e-134 481.5 260 88.8
Lalb_Chr14g0374701 Lupinus albus HOM05D004298 ORTHO05D006236 4.7e-134 481.5 263 88.2
Oeu059093.1 Olea europaea HOM05D004298 ORTHO05D006236 6.2e-134 481.1 268 87.7
CsaV3_1G012820 Cucumis sativus L. HOM05D004298 ORTHO05D006236 8.1e-134 480.7 263 87.5
Lalb_Chr03g0027311 Lupinus albus HOM05D004298 ORTHO05D006236 1.1e-133 480.3 263 87.5
TWI79G1123 Tripterygium wilfordii HOM05D004298 ORTHO05D006236 1.1e-133 480.3 263 87.8
Oeu002865.1 Olea europaea HOM05D004298 ORTHO05D006236 1.4e-133 479.9 262 88.9
RcHm_v2.0_Chr5g0059471 Rosa chinensis HOM05D004298 ORTHO05D006236 1.4e-133 479.9 263 87.5
ClCG03G002170 Citrullus lanatus HOM05D004298 ORTHO05D006236 1.8e-133 479.6 263 87.1
unitig_27.g25060 Utricularia gibba HOM05D004298 ORTHO05D006236 1.8e-133 479.6 263 88.2
arahy.Tifrunner.gnm1.ann1.068WZH Arachis hypogaea HOM05D004298 ORTHO05D006236 3.1e-133 478.8 264 86.7
arahy.Tifrunner.gnm1.ann1.X2DMBM Arachis hypogaea HOM05D004298 ORTHO05D006236 3.1e-133 478.8 264 86.7
SalBow3G4399 Salvia bowleyana HOM05D004298 ORTHO05D006236 3.1e-133 478.8 263 88.6
TAR636G1671 Trochodendron aralioides HOM05D004298 ORTHO05D006236 4.0e-133 478.4 264 87.9
HPP92_014714 Vanilla planifolia HOM05D004298 ORTHO05D006236 4.0e-133 478.4 263 88.6
CDE08G0282 Ceratophyllum demersum HOM05D004298 ORTHO05D006236 5.2e-133 478.0 260 87.7
SEGI_29082 Sequoiadendron giganteum HOM05D004298 ORTHO05D006236 6.8e-133 477.6 263 87.1
Aqoxy1G01246 Aquilegia oxysepala HOM05D004298 ORTHO05D006236 8.9e-133 477.2 263 87.8
MELO3C005061.2 Cucumis melo HOM05D004298 ORTHO05D006236 1.2e-132 476.9 263 86.7
Lalb_Chr24g0394611 Lupinus albus HOM05D004298 ORTHO05D006236 1.2e-132 476.9 263 87.5
TWI31G1183 Tripterygium wilfordii HOM05D004298 ORTHO05D006236 1.5e-132 476.5 263 87.1
Haze_23837 Corylus avellana HOM05D004298 ORTHO05D006236 2.0e-132 476.1 263 87.1
Haze_23839 Corylus avellana HOM05D004298 ORTHO05D006236 2.0e-132 476.1 263 87.1
SGA_v2.0_scaffold2G00894 Striga asiatica HOM05D004298 ORTHO05D006236 2.6e-132 475.7 263 87.5
TAR636G3405 Trochodendron aralioides HOM05D004298 ORTHO05D006236 2.6e-132 475.7 264 87.5
Atru.BG.119.p Acer truncatum HOM05D004298 ORTHO05D006236 4.4e-132 474.9 263 87.5
Eucgr.B02495 Eucalyptus grandis HOM05D004298 ORTHO05D006236 1.7e-131 473.0 263 87.5
Os02g0603800 Oryza sativa ssp. japonica HOM05D004298 ORTHO05D006236 1.7e-131 473.0 263 87.8
Sed0018088 Sechium edule HOM05D004298 ORTHO05D006236 1.7e-131 473.0 260 86.9
MSTRG.12319 Avicennia marina HOM05D004298 ORTHO05D006236 3.8e-131 471.9 263 86.3
Hund08138 Selenicereus undatus HOM05D004298 ORTHO05D006236 3.8e-131 471.9 263 85.2
Gohir.A08G197500 Gossypium hirsutum HOM05D004298 ORTHO05D006236 4.9e-131 471.5 269 84.8
Zm00001eb246530 Zea mays HOM05D004298 ORTHO05D006236 6.4e-131 471.1 263 87.1
MSTRG.17806 Avicennia marina HOM05D004298 ORTHO05D006236 2.4e-130 469.2 263 85.6
Lj3g0003128 Lotus japonicus HOM05D004298 ORTHO05D006236 4.1e-130 468.4 290 79.3
AagrBONN_evm.TU.Sc2ySwM_117.2437 Anthoceros agrestis HOM05D004298 ORTHO05D006236 7.8e-129 464.2 263 84.8
Migut.N02606 Erythranthe guttata HOM05D004298 ORTHO05D006236 7.8e-129 464.2 264 85.2
vmacro14439 Vaccinium macrocarpon HOM05D004298 ORTHO05D006236 1.7e-128 463.0 324 72.8
BolC9t58204H Brassica oleracea HOM05D004298 ORTHO05D006236 2.5e-127 459.1 296 78.0
SMO146G0141 Selaginella moellendorffii HOM05D004298 ORTHO05D006236 6.2e-126 454.5 263 84.8
AUR62039630 Chenopodium quinoa HOM05D004298 ORTHO05D006236 1.2e-124 450.3 279 79.2
Mapoly0048s0084 Marchantia polymorpha HOM05D004298 ORTHO05D006236 7.6e-124 447.6 263 81.4
Lj2C1029G11 Lonicera japonica HOM05D004298 ORTHO05D006236 1.7e-123 446.4 235 92.3
Pp3c19_16320 Physcomitrium patens HOM05D004298 ORTHO05D006236 4.6e-121 438.3 261 80.8
Pp3c22_14940 Physcomitrium patens HOM05D004298 ORTHO05D006236 1.1e-119 433.7 263 79.1
Pp3c21_19070 Physcomitrium patens HOM05D004298 ORTHO05D006236 6.2e-118 427.9 262 78.6
Nitab4.5_0006333g0040 Nicotiana tabacum HOM05D004298 ORTHO05D006236 3.0e-112 409.1 250 82.0
COL.COLO4_18338 Corchorus olitorius HOM05D004298 ORTHO05D006236 1.1e-106 390.6 263 75.3
Atru.chr3.3635 Acer truncatum HOM05D004298 ORTHO05D006236 7.4e-103 377.9 263 72.2
Nitab4.5_0011114g0030 Nicotiana tabacum HOM05D004298 ORTHO05D006236 1.0e-99 367.5 196 88.3
Nitab4.5_0012814g0010 Nicotiana tabacum HOM05D004298 ORTHO05D006236 1.0e-99 367.5 196 88.3
Cre12.g490350 Chlamydomonas reinhardtii HOM05D004298 ORTHO05D006236 3.2e-98 362.5 258 68.2
PRCOL_00002263 Prasinoderma coloniale HOM05D004298 ORTHO05D006236 2.1e-97 359.8 266 66.9
MCO10G060 Micromonas commoda HOM05D004298 ORTHO05D006236 5.7e-95 351.7 262 66.0
Hma1.2p1_0391F.1_g142750 Hydrangea macrophylla HOM05D004298 ORTHO05D006236 2.6e-84 316.2 189 84.7
HanXRQChr02g0034121 Helianthus annuus HOM05D004298 ORTHO05D006236 7.7e-68 261.5 132 95.5
Nitab4.5_0005621g0180 Nicotiana tabacum HOM05D004609 ORTHO05D005537 5.7e-55 218.8 161 70.2
SGA_v2.0_scaffold84G26546 Striga asiatica HOM05D004298 ORTHO05D006236 5.6e-34 149.1 124 61.3
HanXRQChr12g0375701 Helianthus annuus HOM05D004298 ORTHO05D006236 6.8e-32 142.1 72 94.4
MBI12_g33358_MAGBIO Magnolia biondii HOM05D004298 ORTHO05D025791 8.9e-32 141.7 73 87.7
MBI12_g31227_MAGBIO Magnolia biondii HOM05D004298 ORTHO05D025791 4.6e-28 129.4 69 85.5
CBR_g51121 Chara braunii HOM05D004298 ORTHO05D006236 2.2e-22 110.5 113 48.7
SEGI_39119 Sequoiadendron giganteum HOM05D004298 ORTHO05D006236 8.3e-22 108.6 69 69.6
Ca_28980_v3 Cicer arietinum L. HOM05D004298 ORTHO05D007370 1.3e-19 101.3 122 43.4
SEGI_37191 Sequoiadendron giganteum HOM05D004298 ORTHO05D050955 6.2e-17 92.4 222 31.5
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 1.4e-13 81.3 49 85.7
SEGI_34190 Sequoiadendron giganteum HOM05D004298 ORTHO05D050955 2.4e-13 80.5 52 71.2
SEGI_14813 Sequoiadendron giganteum HOM05D016845 ORTHO05D018122 4.8e-09 66.2 41 73.2
PSO832G0757 Papaver somniferum HOM05D004298 ORTHO05D303626 4.9e-06 56.2 31 87.1


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