Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0345591 Helianthus annuus HOM05D008481 ORTHO05D010853 2.1e-288 995.0 483 100.0
HanXRQChr13g0421041 Helianthus annuus HOM05D008481 ORTHO05D010853 2.4e-260 901.7 525 86.1
HanXRQChr05g0143231 Helianthus annuus HOM05D008481 ORTHO05D010853 2.0e-126 456.8 438 53.0
HanXRQChr03g0068141 Helianthus annuus HOM05D008481 ORTHO05D010853 8.5e-117 424.9 460 49.6
HanXRQChr10g0304581 Helianthus annuus HOM05D008481 ORTHO05D010853 2.0e-113 413.7 487 45.8
HanXRQChr02g0036691 Helianthus annuus HOM05D008481 ORTHO05D010853 5.3e-111 405.6 373 53.9
HanXRQChr12g0372911 Helianthus annuus HOM05D008481 ORTHO05D010853 9.1e-111 404.8 294 66.0
HanXRQChr13g0406131 Helianthus annuus HOM05D008481 ORTHO05D010853 1.6e-110 404.1 389 51.9
HanXRQChr08g0221501 Helianthus annuus HOM05D008481 ORTHO05D010853 1.1e-100 371.3 437 45.1
HanXRQChr15g0467161 Helianthus annuus HOM05D008481 ORTHO05D010853 1.5e-100 370.9 472 43.4
HanXRQChr14g0447151 Helianthus annuus HOM05D000026 ORTHO05D000127 7.2e-100 368.6 416 47.1
HanXRQChr05g0132501 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-99 367.9 468 45.1
HanXRQChr11g0333451 Helianthus annuus HOM05D008481 ORTHO05D010853 1.6e-99 367.5 418 47.4
HanXRQChr13g0403351 Helianthus annuus HOM05D008481 ORTHO05D010853 2.1e-99 367.1 436 45.9
HanXRQChr13g0424211 Helianthus annuus HOM05D008481 ORTHO05D010853 2.1e-99 367.1 423 45.4
HanXRQChr06g0165321 Helianthus annuus HOM05D008481 ORTHO05D010853 1.0e-98 364.8 471 44.4
HanXRQChr09g0247291 Helianthus annuus HOM05D000103 ORTHO05D000049 1.0e-98 364.8 462 44.2
HanXRQChr13g0425251 Helianthus annuus HOM05D008481 ORTHO05D010853 4.0e-98 362.8 425 45.4
HanXRQChr04g0123551 Helianthus annuus HOM05D008481 ORTHO05D010853 1.5e-97 360.9 318 54.7
HanXRQChr03g0068301 Helianthus annuus HOM05D008481 ORTHO05D010853 2.0e-97 360.5 408 45.3
HanXRQChr03g0080651 Helianthus annuus HOM05D008481 ORTHO05D010853 2.6e-97 360.1 385 45.7
HanXRQChr17g0537341 Helianthus annuus HOM05D008481 ORTHO05D010853 4.4e-97 359.4 447 43.4
HanXRQChr04g0098781 Helianthus annuus HOM05D008481 ORTHO05D010853 5.7e-97 359.0 440 44.5
HanXRQChr14g0444101 Helianthus annuus HOM05D008481 ORTHO05D010853 9.8e-97 358.2 399 47.1
HanXRQChr10g0279551 Helianthus annuus HOM05D008481 ORTHO05D010853 1.3e-96 357.8 406 45.8
HanXRQChr04g0119441 Helianthus annuus HOM05D008481 ORTHO05D010853 2.8e-96 356.7 446 43.3
HanXRQChr01g0028171 Helianthus annuus HOM05D008481 ORTHO05D010853 6.3e-96 355.5 411 47.4
HanXRQChr05g0131281 Helianthus annuus HOM05D008481 ORTHO05D010853 1.4e-95 354.4 313 55.9
HanXRQChr11g0323671 Helianthus annuus HOM05D008481 ORTHO05D010853 3.1e-95 353.2 475 43.4
HanXRQChr04g0119421 Helianthus annuus HOM05D008481 ORTHO05D010853 4.1e-95 352.8 411 45.0
HanXRQChr14g0443501 Helianthus annuus HOM05D001485 ORTHO05D001384 2.0e-94 350.5 408 45.8
HanXRQChr13g0404711 Helianthus annuus HOM05D008481 ORTHO05D010853 5.0e-93 345.9 442 42.8
HanXRQChr13g0424061 Helianthus annuus HOM05D000009 ORTHO05D010853 8.6e-93 345.1 451 41.5
HanXRQChr17g0545601 Helianthus annuus HOM05D008481 ORTHO05D010853 2.8e-91 340.1 345 52.8
HanXRQChr01g0014081 Helianthus annuus HOM05D008481 ORTHO05D010853 1.3e-88 331.3 451 41.5
HanXRQChr06g0176691 Helianthus annuus HOM05D008481 ORTHO05D010853 1.8e-87 327.4 367 44.1
HanXRQChr06g0175741 Helianthus annuus HOM05D008481 ORTHO05D010853 3.5e-86 323.2 534 37.1
HanXRQChr10g0292931 Helianthus annuus HOM05D008481 ORTHO05D010853 1.6e-78 297.7 353 45.9
HanXRQChr04g0099031 Helianthus annuus HOM05D008481 ORTHO05D010853 4.6e-78 296.2 341 43.4
HanXRQChr13g0423431 Helianthus annuus HOM05D008481 ORTHO05D010853 3.0e-77 293.5 216 69.9
HanXRQChr08g0216321 Helianthus annuus HOM05D000374 ORTHO05D000238 1.2e-75 288.1 487 38.2
HanXRQChr06g0175731 Helianthus annuus HOM05D008481 ORTHO05D010853 6.2e-67 259.2 238 54.2
HanXRQChr09g0238771 Helianthus annuus HOM05D008481 ORTHO05D010853 2.5e-60 237.3 267 44.6
HanXRQChr02g0039311 Helianthus annuus HOM05D008481 ORTHO05D010853 1.7e-56 224.6 236 48.3
HanXRQChr13g0423421 Helianthus annuus HOM05D008481 ORTHO05D010853 9.3e-47 192.2 136 69.9
HanXRQChr10g0293981 Helianthus annuus HOM05D000352 ORTHO05D010853 1.3e-37 161.8 133 55.6
HanXRQChr17g0555551 Helianthus annuus HOM05D000430 ORTHO05D010853 9.0e-34 149.1 233 40.8
HanXRQChr06g0178781 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-30 138.7 391 29.4
HanXRQChr02g0035101 Helianthus annuus HOM05D008481 ORTHO05D010853 7.6e-25 119.4 371 27.5
HanXRQChr07g0196561 Helianthus annuus HOM05D008481 ORTHO05D010853 4.3e-20 103.6 109 50.5
ECA247G0145 Erigeron canadensis HOM05D008481 ORTHO05D020572 4.8e-19 100.1 372 26.1
ECA240G4703 Erigeron canadensis HOM05D008481 ORTHO05D020572 2.2e-16 91.3 342 25.1
ECA236G1121 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-13 80.9 234 30.3
HanXRQChr06g0175721 Helianthus annuus HOM05D000259 ORTHO05D000155 6.7e-13 79.7 430 22.1
HanXRQChr01g0010101 Helianthus annuus HOM05D002629 ORTHO05D015691 2.4e-10 71.2 320 24.1
ECA247G2483 Erigeron canadensis HOM05D008481 ORTHO05D020572 9.1e-10 69.3 359 22.3
ECA240G0834 Erigeron canadensis HOM05D008481 ORTHO05D020572 2.6e-09 67.8 366 23.5
HanXRQChr13g0387641 Helianthus annuus HOM05D002629 ORTHO05D015691 1.3e-08 65.5 311 23.2
MSTRG.17282 Avicennia marina HOM05D000773 ORTHO05D000588 2.2e-08 64.7 158 31.6
HanXRQChr13g0421571 Helianthus annuus HOM05D002629 ORTHO05D015691 2.9e-08 64.3 444 21.2
HanXRQChr13g0421581 Helianthus annuus HOM05D002629 ORTHO05D015691 2.9e-08 64.3 444 21.2
HanXRQChr16g0527861 Helianthus annuus HOM05D002629 ORTHO05D015691 2.9e-08 64.3 400 20.8
Sopen05g028320 Solanum pennellii HOM05D000773 ORTHO05D000588 5.0e-08 63.5 65 44.6
HanXRQChr04g0116991 Helianthus annuus HOM05D000103 ORTHO05D000049 6.5e-08 63.2 399 20.6
HanXRQChr08g0223151 Helianthus annuus HOM05D002629 ORTHO05D015691 6.5e-08 63.2 444 20.9
Solyc05g049960.4 Solanum lycopersicum HOM05D000773 ORTHO05D000588 6.5e-08 63.2 65 44.6
HanXRQChr11g0332071 Helianthus annuus HOM05D002629 ORTHO05D015691 8.5e-08 62.8 359 20.9
PGSC0003DMG400021657 Solanum tuberosum HOM05D000773 ORTHO05D000588 8.5e-08 62.8 65 44.6
HanXRQChr01g0009301 Helianthus annuus HOM05D002629 ORTHO05D015691 1.1e-07 62.4 406 20.9
HanXRQChr03g0093141 Helianthus annuus HOM05D002629 ORTHO05D003221 1.1e-07 62.4 406 20.7
HanXRQChr01g0014131 Helianthus annuus HOM05D002629 ORTHO05D015691 1.4e-07 62.0 444 20.9
Nitab4.5_0003779g0070 Nicotiana tabacum HOM05D000773 ORTHO05D000588 1.4e-07 62.0 122 35.2
Peaxi162Scf00191g01433 Petunia axillaris HOM05D000773 ORTHO05D000588 1.4e-07 62.0 83 39.8
HanXRQChr10g0279691 Helianthus annuus HOM05D000129 ORTHO05D000144 1.9e-07 61.6 141 28.4
Hma1.2p1_1123F.1_g259420 Hydrangea macrophylla HOM05D000773 ORTHO05D000588 1.9e-07 61.6 87 37.9
Nitab4.5_0001702g0140 Nicotiana tabacum HOM05D000773 ORTHO05D000588 1.9e-07 61.6 83 39.8
GSVIVG01027004001 Vitis vinifera HOM05D000773 ORTHO05D000588 2.5e-07 61.2 87 35.6
Sc26g0000860 Simmondsia chinensis HOM05D000773 ORTHO05D000588 3.2e-07 60.8 87 37.9
Cc02_g38230 Coffea canephora HOM05D000773 ORTHO05D000588 4.2e-07 60.5 122 32.8
ECA240G3418 Erigeron canadensis HOM05D000773 ORTHO05D000588 4.2e-07 60.5 121 31.4
HanXRQChr13g0426641 Helianthus annuus HOM05D000773 ORTHO05D000588 9.4e-07 59.3 65 38.5
AL4G45260 Arabidopsis lyrata HOM05D000773 ORTHO05D000588 2.1e-06 58.2 65 41.5
CAN.G78.96 Capsicum annuum HOM05D000773 ORTHO05D000588 2.1e-06 58.2 68 38.2
Peaxi162Scf00020g00813 Petunia axillaris HOM05D000773 ORTHO05D000588 2.1e-06 58.2 65 41.5
vmacro20920 Vaccinium macrocarpon HOM05D000773 ORTHO05D000588 2.7e-06 57.8 87 35.6
Carub.0004s2873 Capsella rubella HOM05D000773 ORTHO05D000588 3.6e-06 57.4 65 41.5
SalBow3G0125 Salvia bowleyana HOM05D000773 ORTHO05D000588 3.6e-06 57.4 106 33.0
AT2G46040 Arabidopsis thaliana HOM05D000773 ORTHO05D000588 4.7e-06 57.0 62 41.9
AUR62010710 Chenopodium quinoa HOM05D000773 ORTHO05D000588 4.7e-06 57.0 66 40.9
AUR62027257 Chenopodium quinoa HOM05D000773 ORTHO05D000588 4.7e-06 57.0 66 40.9
HanXRQChr02g0045931 Helianthus annuus HOM05D000583 ORTHO05D000442 4.7e-06 57.0 87 35.6
HanXRQChr11g0351931 Helianthus annuus HOM05D001126 ORTHO05D000991 4.7e-06 57.0 87 36.8
Lsat_1_v5_gn_3_137381 Lactuca sativa HOM05D000773 ORTHO05D000588 6.1e-06 56.6 134 27.6
Atru.chr5.519 Acer truncatum HOM05D000773 ORTHO05D000588 7.9e-06 56.2 84 33.3
DCAR_008615 Daucus carota HOM05D000773 ORTHO05D000588 7.9e-06 56.2 129 28.7
Nitab4.5_0000583g0230 Nicotiana tabacum HOM05D000773 ORTHO05D000588 7.9e-06 56.2 92 32.6


User provided reference genes

Program Settings