Gene: Solyc05g049960.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g049960.4
  • Transcript Identifier Solyc05g049960.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 59184954-59192001 : negative

Gene Family Information

  • ID HOM05D000773
  • #Genes/#Species 761/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g049960.4.1
  • uniprot A0A3Q7HEF0
  • gene_id Solyc05g049960

Descriptions

  • Description ELM2 domain-containing protein (AHRD V3.3 *** A0A2U1QGB1_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT2G46040
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT2G46040
GO:0016575
ISO
PLAZA Integrative Orthologyhistone deacetylation AT2G46040

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0048555
ISO
PLAZA Integrative Orthologygenerative cell nucleus AT2G46040
GO:0000118
ISO
PLAZA Integrative Orthologyhistone deacetylase complex AT2G46040
GO:0048556
ISO
PLAZA Integrative Orthologymicrosporocyte nucleus AT2G46040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036431 ARID DNA-binding domain superfamily
IPR001606 ARID DNA-binding domain
IPR001005 SANT/Myb domain
Mapman id Description
15.5.25 RNA biosynthesis.transcriptional regulation.transcription factor (ARID)