Gene: Cc02_g38230
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g38230
- Transcript Identifier Cc02_g38230.1
- Gene Type Coding gene
- Location chr2 : 52981461-52985117 : negative
Gene Family Information
- ID HOM05D000773
- #Genes/#Species 761/96
- Phylogenetic origin
- ID ORTHO05D000588
- #Genes/#Species 758/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB A5BAN2
- UniProtKB Q9LDD4
- UniProtKB F6I672
- UniProtKB Q84JT7
- UniProtKB I1KI85
- id GSCOCG00027890001
Descriptions
- Description Putative AT-rich interactive domain-containing protein 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048235 | ISO | PLAZA Integrative Orthology | pollen sperm cell differentiation | AT2G46040 |
| GO:0010628 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression | AT2G46040 |
| GO:0016575 | ISO | PLAZA Integrative Orthology | histone deacetylation | AT2G46040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048555 | ISO | PLAZA Integrative Orthology | generative cell nucleus | AT2G46040 |
| GO:0000118 | ISO | PLAZA Integrative Orthology | histone deacetylase complex | AT2G46040 |
| GO:0048556 | ISO | PLAZA Integrative Orthology | microsporocyte nucleus | AT2G46040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.25 | RNA biosynthesis.transcriptional regulation.transcription factor (ARID) |