Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0331251 Helianthus annuus HOM05D002149 ORTHO05D002154 4.0e-33 144.1 66 100.0
HanXRQChr13g0425011 Helianthus annuus HOM05D002149 ORTHO05D002154 8.8e-25 116.3 56 92.9
HanXRQChr05g0152731 Helianthus annuus HOM05D002149 ORTHO05D002154 7.7e-21 103.2 51 90.2
HanXRQChr15g0482511 Helianthus annuus HOM05D002149 ORTHO05D002154 3.8e-20 100.9 55 83.6
HanXRQChr04g0124171 Helianthus annuus HOM05D002149 ORTHO05D002154 4.7e-18 94.0 55 72.7
Lsat_1_v5_gn_7_19061 Lactuca sativa HOM05D002149 ORTHO05D002154 1.4e-17 92.4 55 72.7
ECA236G0114 Erigeron canadensis HOM05D002149 ORTHO05D002154 1.2e-16 89.4 55 69.1
Lsat_1_v5_gn_1_16001 Lactuca sativa HOM05D002149 ORTHO05D002154 2.0e-13 78.6 59 59.3
DCAR_028109 Daucus carota HOM05D002149 ORTHO05D002154 1.7e-12 75.5 55 56.4
Cc02_g13040 Coffea canephora HOM05D002149 ORTHO05D002154 5.0e-12 73.9 55 56.4
Dinv40535 Davidia involucrata HOM05D002149 ORTHO05D002154 6.6e-12 73.6 55 56.4
Solyc02g078550.3 Solanum lycopersicum HOM05D002149 ORTHO05D002154 1.1e-11 72.8 55 54.5
Sopen02g023400 Solanum pennellii HOM05D002149 ORTHO05D002154 1.1e-11 72.8 55 54.5
Migut.M01186 Erythranthe guttata HOM05D002149 ORTHO05D002154 1.9e-11 72.0 55 54.5
CiPaw.10G046800 Carya illinoinensis HOM05D002149 ORTHO05D002154 2.5e-11 71.6 55 56.4
Peaxi162Scf00379g00054 Petunia axillaris HOM05D002149 ORTHO05D002154 2.5e-11 71.6 55 52.7
CiPaw.09G057100 Carya illinoinensis HOM05D002149 ORTHO05D002154 4.3e-11 70.9 55 54.5
Oeu014699.1 Olea europaea HOM05D002149 ORTHO05D002154 5.6e-11 70.5 55 54.5
Haze_06503 Corylus avellana HOM05D002149 ORTHO05D002154 7.3e-11 70.1 55 54.5
Cfa000412 Carpinus fangiana HOM05D002149 ORTHO05D002154 9.5e-11 69.7 55 54.5
HanXRQChr16g0498281 Helianthus annuus HOM05D002149 ORTHO05D002154 1.2e-10 69.3 33 93.9
Lj2C286T11 Lonicera japonica HOM05D002149 ORTHO05D002154 1.6e-10 68.9 55 54.5
Rhsim02G0127000 Rhododendron simsii HOM05D002149 ORTHO05D002154 1.6e-10 68.9 55 54.5
Actinidia05613 Actinidia chinensis HOM05D002149 ORTHO05D002154 2.1e-10 68.6 55 52.7
QL05p039486 Quercus lobata HOM05D002149 ORTHO05D002154 3.6e-10 67.8 55 54.5
SalBow7G4808 Salvia bowleyana HOM05D002149 ORTHO05D002154 3.6e-10 67.8 53 52.8
Duzib235G0094 Durio zibethinus HOM05D002149 ORTHO05D002154 4.7e-10 67.4 55 54.5
Nitab4.5_0003668g0090 Nicotiana tabacum HOM05D002149 ORTHO05D002154 4.7e-10 67.4 55 54.5
Nitab4.5_0012352g0020 Nicotiana tabacum HOM05D002149 ORTHO05D002154 4.7e-10 67.4 55 54.5
SalBow8G5259 Salvia bowleyana HOM05D002149 ORTHO05D002154 4.7e-10 67.4 56 53.6
Prupe.4G043500 Prunus persica HOM05D002149 ORTHO05D002154 6.1e-10 67.0 55 50.9
Gorai.010G255200 Gossypium raimondii HOM05D002149 ORTHO05D002154 8.0e-10 66.6 55 50.9
COL.COLO4_31506 Corchorus olitorius HOM05D002149 ORTHO05D002154 1.0e-09 66.2 55 52.7
Thecc.06G191200 Theobroma cacao HOM05D002149 ORTHO05D002154 1.0e-09 66.2 55 52.7
Gohir.A06G210101 Gossypium hirsutum HOM05D002149 ORTHO05D002154 1.4e-09 65.9 55 52.7
vmacro15893 Vaccinium macrocarpon HOM05D002149 ORTHO05D002154 1.4e-09 65.9 55 52.7
Ciclev10014168m.g Citrus clementina HOM05D002149 ORTHO05D002154 3.1e-09 64.7 55 52.7
Gohir.D06G211100 Gossypium hirsutum HOM05D002149 ORTHO05D002154 4.0e-09 64.3 55 49.1
RcHm_v2.0_Chr5g0007991 Rosa chinensis HOM05D002149 ORTHO05D002154 4.0e-09 64.3 55 50.9
TAR627G0551 Trochodendron aralioides HOM05D002149 ORTHO05D002154 4.0e-09 64.3 55 52.7
CAN.G1627.11 Capsicum annuum HOM05D002149 ORTHO05D002154 5.2e-09 63.9 55 52.7
Eucgr.E03350 Eucalyptus grandis HOM05D002149 ORTHO05D002154 5.2e-09 63.9 55 47.3
Oeu043701.2 Olea europaea HOM05D002149 ORTHO05D002154 5.2e-09 63.9 47 61.7
TWI63G0661 Tripterygium wilfordii HOM05D002149 ORTHO05D002154 5.2e-09 63.9 55 54.5
Duzib160G0447 Durio zibethinus HOM05D002149 ORTHO05D002154 6.8e-09 63.5 55 52.7
MD05G1316500 Malus domestica HOM05D002149 ORTHO05D002154 6.8e-09 63.5 56 51.8
Lalb_Chr16g0383611 Lupinus albus HOM05D002149 ORTHO05D002154 8.9e-09 63.2 56 50.0
Atru.chr10.1942 Acer truncatum HOM05D002149 ORTHO05D002154 1.5e-08 62.4 55 50.9
FAN16G1429 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.5e-08 62.4 55 49.1
MD10G1297000 Malus domestica HOM05D002149 ORTHO05D002154 1.5e-08 62.4 56 50.0
AT4G21670 Arabidopsis thaliana HOM05D002149 ORTHO05D002154 2.6e-08 61.6 55 52.7
PGR042G1575 Punica granatum HOM05D002149 ORTHO05D002154 2.6e-08 61.6 55 45.5
Sc17g0006300 Simmondsia chinensis HOM05D002149 ORTHO05D002154 3.4e-08 61.2 55 45.5
arahy.Tifrunner.gnm1.ann1.55XWXX Arachis hypogaea HOM05D002149 ORTHO05D002154 4.4e-08 60.8 56 48.2
arahy.Tifrunner.gnm1.ann1.9SSZ5T Arachis hypogaea HOM05D002149 ORTHO05D002154 4.4e-08 60.8 56 48.2
CANSAT35G1545 Cannabis sativa HOM05D002149 ORTHO05D002154 4.4e-08 60.8 55 45.5
Manes.16G025300 Manihot esculenta HOM05D002149 ORTHO05D002154 4.4e-08 60.8 55 47.3
Psat7g113080 Pisum sativum HOM05D002149 ORTHO05D002154 4.4e-08 60.8 56 50.0
FvH4_3g04830 Fragaria vesca HOM05D002149 ORTHO05D002154 5.8e-08 60.5 55 47.3
FAN11G2695 Fragaria x ananassa HOM05D002149 ORTHO05D002154 5.8e-08 60.5 55 47.3
FAN21G1933 Fragaria x ananassa HOM05D002149 ORTHO05D002154 5.8e-08 60.5 55 47.3
FAN25G0477 Fragaria x ananassa HOM05D002149 ORTHO05D002154 5.8e-08 60.5 55 47.3
Hund23699 Selenicereus undatus HOM05D002149 ORTHO05D002154 5.8e-08 60.5 55 49.1
Carub.0007s1974 Capsella rubella HOM05D002149 ORTHO05D002154 7.5e-08 60.1 55 50.9
Sabra11G0033900 Salix brachista HOM05D002149 ORTHO05D002154 7.5e-08 60.1 55 47.3
C07p51300 Brassica napus HOM05D002149 ORTHO05D002154 9.8e-08 59.7 56 50.0
Gohir.A10G023900 Gossypium hirsutum HOM05D002149 ORTHO05D002154 9.8e-08 59.7 55 49.1
Gohir.D10G024600 Gossypium hirsutum HOM05D002149 ORTHO05D002154 9.8e-08 59.7 55 49.1
TPR.G11981 Trifolium pratense HOM05D002149 ORTHO05D002154 9.8e-08 59.7 56 50.0
TWI38G1276 Tripterygium wilfordii HOM05D002149 ORTHO05D002154 9.8e-08 59.7 55 50.9
A03p52860 Brassica napus HOM05D002149 ORTHO05D002154 1.3e-07 59.3 56 50.0
Lalb_Chr20g0122001 Lupinus albus HOM05D002149 ORTHO05D002154 1.3e-07 59.3 56 48.2
Nn1g04013 Nelumbo nucifera HOM05D002149 ORTHO05D002154 1.3e-07 59.3 55 45.5
Potri.011G049400 Populus trichocarpa HOM05D002149 ORTHO05D002154 1.3e-07 59.3 55 49.1
BcaNung00845 Brassica carinata HOM05D002149 ORTHO05D002154 1.7e-07 58.9 56 50.0
BolC7t45630H Brassica oleracea HOM05D002149 ORTHO05D002154 1.7e-07 58.9 56 50.0
unitig_26.g9370 Utricularia gibba HOM05D002149 ORTHO05D002154 1.7e-07 58.9 55 41.8
Cpa.g.sc27.71 Carica papaya HOM05D002149 ORTHO05D002154 2.2e-07 58.5 55 50.9
Gorai.011G025900 Gossypium raimondii HOM05D002149 ORTHO05D002154 2.2e-07 58.5 55 47.3
Lj4g0027648 Lotus japonicus HOM05D002149 ORTHO05D002154 2.2e-07 58.5 56 48.2
BcaC06g30671 Brassica carinata HOM05D002149 ORTHO05D002154 2.9e-07 58.2 55 49.1
Thhalv10024324m.g Eutrema salsugineum HOM05D002149 ORTHO05D002154 2.9e-07 58.2 55 49.1
Glyma.07G194800 Glycine max HOM05D002149 ORTHO05D002154 2.9e-07 58.2 56 48.2
Medtr4g089010 Medicago truncatula HOM05D002149 ORTHO05D002154 2.9e-07 58.2 56 48.2
Sp7g19780 Schrenkiella parvula HOM05D002149 ORTHO05D002154 2.9e-07 58.2 55 49.1
BraA03t14362Z Brassica rapa HOM05D002149 ORTHO05D002154 3.7e-07 57.8 55 49.1
Glyma.13G181700 Glycine max HOM05D002149 ORTHO05D002154 3.7e-07 57.8 56 46.4
Phvul.002G226900 Phaseolus vulgaris HOM05D002149 ORTHO05D002154 3.7e-07 57.8 56 48.2
Potri.004G040000 Populus trichocarpa HOM05D002149 ORTHO05D002154 3.7e-07 57.8 55 47.3
VMungo0251G1624 Vigna mungo HOM05D002149 ORTHO05D002154 3.7e-07 57.8 56 48.2
GSVIVG01006447001 Vitis vinifera HOM05D002149 ORTHO05D002154 3.7e-07 57.8 55 47.3
Aa31LG6G3650 Aethionema arabicum HOM05D002149 ORTHO05D002154 4.9e-07 57.4 51 52.9
Migut.H01509 Erythranthe guttata HOM05D002149 ORTHO05D002154 6.4e-07 57.0 55 45.5
Glyma.13G241400 Glycine max HOM05D002149 ORTHO05D002154 6.4e-07 57.0 56 44.6
THA.LOC104812840 Tarenaya hassleriana HOM05D002149 ORTHO05D002154 6.4e-07 57.0 55 50.9
AL7G32300 Arabidopsis lyrata HOM05D002149 ORTHO05D002154 8.3e-07 56.6 55 49.1
Ca_18528_v3 Cicer arietinum L. HOM05D002149 ORTHO05D002154 1.1e-06 56.2 55 45.5
Glyma.15G072000 Glycine max HOM05D002149 ORTHO05D002154 1.1e-06 56.2 56 44.6
Aqoxy4G01071 Aquilegia oxysepala HOM05D002149 ORTHO05D002154 1.4e-06 55.8 64 37.5
SGA_v2.0_scaffold7G03978 Striga asiatica HOM05D002149 ORTHO05D002154 1.4e-06 55.8 55 40.0
CARHR228390 Cardamine hirsuta HOM05D002149 ORTHO05D002154 1.9e-06 55.5 55 45.5
Lalb_Chr05g0218371 Lupinus albus HOM05D002149 ORTHO05D002154 1.9e-06 55.5 56 46.4
Zm00001eb248450 Zea mays HOM05D002149 ORTHO05D002154 1.9e-06 55.5 55 43.6
THA.LOC104806283 Tarenaya hassleriana HOM05D002149 ORTHO05D002154 3.2e-06 54.7 57 43.9
EL10Ac8g20342 Beta vulgaris HOM05D002149 ORTHO05D002154 4.1e-06 54.3 55 43.6
MSTRG.14683 Avicennia marina HOM05D002149 ORTHO05D002154 5.4e-06 53.9 55 45.5


User provided reference genes

Program Settings