Gene: Sopen02g023400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g023400
  • Transcript Identifier Sopen02g023400.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 46785027-46794480 : negative

Gene Family Information

  • ID HOM05D002149
  • #Genes/#Species 312/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g023400.1

Descriptions

  • Description encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. | C-terminal domain phosphatase-like 1 (CPL1) | FUNCTIONS IN: double-stranded RNA binding, phosphatase activity, nucleotide phosphatase activity | INVOLVED IN: abscisic acid mediated signaling pathway, negative regulation of transcription, response to abiotic stimulus | LOCATED IN: intracellular | CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding , NLI interacting factor | BEST Arabidopsis thaliana protein match is: carboxyl-terminal domain (ctd) phosphatase-like 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070940
IEA
InterProdephosphorylation of RNA polymerase II C-terminal domain
GO:0009738
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway AT4G21670
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G21670
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G21670
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT4G21670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008420
IEA
InterProRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0004721
ISO
PLAZA Integrative Orthologyphosphoprotein phosphatase activity AT4G21670
GO:0004647
ISO
PLAZA Integrative Orthologyphosphoserine phosphatase activity AT4G21670
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G21670
GO:0016791
ISO
PLAZA Integrative Orthologyphosphatase activity AT4G21670
GO:0036424
ISO
PLAZA Integrative OrthologyL-phosphoserine phosphatase activity AT4G21670

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G21670

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039189 CTD phosphatase Fcp1
IPR004274 FCP1 homology domain
IPR014720 Double-stranded RNA-binding domain
IPR023214 HAD superfamily
IPR036412 HAD-like superfamily
Mapman id Description
15.3.2.2 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-I phosphatase
18.4.26.1.5 Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster H/CPL1-2 phosphatase