Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 4.6e-39 164.1 83 100.0
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.2e-36 155.2 83 95.2
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 4.1e-35 151.0 83 92.8
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 1.2e-34 149.4 79 96.2
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 1.5e-34 149.1 79 96.2
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 2.0e-34 148.7 82 93.9
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 2.6e-34 148.3 82 92.7
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 5.9e-34 147.1 79 94.9
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 5.9e-34 147.1 83 88.0
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 7.7e-34 146.7 80 93.8
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 7.7e-34 146.7 83 89.2
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 1.0e-33 146.4 79 94.9
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 1.3e-33 146.0 79 92.4
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.2e-33 145.2 79 94.9
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 5.0e-33 144.1 82 89.0
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 6.5e-33 143.7 79 92.4
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.1e-32 142.9 79 93.7
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.1e-32 142.9 83 86.7
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 1.4e-32 142.5 83 86.7
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 1.4e-32 142.5 83 86.7
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 1.9e-32 142.1 83 86.7
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 2.5e-32 141.7 75 96.0
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 4.2e-32 141.0 82 89.0
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 4.2e-32 141.0 83 85.5
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 7.2e-32 140.2 82 86.6
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 1.6e-31 139.0 82 86.6
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 2.1e-31 138.7 83 84.3
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 2.7e-31 138.3 83 85.5
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 3.6e-31 137.9 82 85.4
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 3.6e-31 137.9 82 85.4
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 3.6e-31 137.9 82 85.4
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 7.9e-31 136.7 79 88.6
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 7.9e-31 136.7 83 84.3
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.0e-30 136.3 79 87.3
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 1.0e-30 136.3 79 88.6
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.4e-30 136.0 82 84.1
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 1.8e-30 135.6 82 84.1
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 2.3e-30 135.2 83 81.9
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.3e-30 135.2 79 87.3
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.3e-30 135.2 79 87.3
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 3.0e-30 134.8 79 87.3
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 3.0e-30 134.8 79 87.3
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 3.9e-30 134.4 79 86.1
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 3.9e-30 134.4 81 85.2
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 3.9e-30 134.4 79 86.1
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 3.9e-30 134.4 79 87.3
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 3.9e-30 134.4 79 87.3
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 5.1e-30 134.0 80 85.0
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 6.7e-30 133.7 80 83.8
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 6.7e-30 133.7 79 86.1
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 6.7e-30 133.7 82 82.9
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 8.8e-30 133.3 80 85.0
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 8.8e-30 133.3 81 84.0
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 1.5e-29 132.5 79 86.1
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.5e-29 132.5 79 83.5
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 1.5e-29 132.5 77 87.0
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 2.0e-29 132.1 79 84.8
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 2.0e-29 132.1 79 84.8
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 2.0e-29 132.1 79 86.1
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 2.6e-29 131.7 79 84.8
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 2.6e-29 131.7 79 84.8
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 2.6e-29 131.7 79 84.8
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.6e-29 131.7 79 84.8
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 2.6e-29 131.7 79 84.8
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 2.6e-29 131.7 83 80.7
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 2.6e-29 131.7 79 84.8
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 2.6e-29 131.7 79 84.8
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 3.3e-29 131.3 79 84.8
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 3.3e-29 131.3 79 84.8
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 4.4e-29 131.0 79 83.5
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 4.4e-29 131.0 76 86.8
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 7.4e-29 130.2 79 83.5
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 7.4e-29 130.2 79 83.5
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 7.4e-29 130.2 79 84.8
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 9.7e-29 129.8 83 78.3
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 9.7e-29 129.8 81 82.7
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 1.3e-28 129.4 88 78.4
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.3e-28 129.4 79 83.5
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.7e-28 129.0 78 82.1
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.7e-28 129.0 79 83.5
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 2.2e-28 128.6 80 81.2
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 2.8e-28 128.3 79 82.3
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 2.8e-28 128.3 79 82.3
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.7e-28 127.9 82 79.3
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 4.8e-28 127.5 80 81.2
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 6.3e-28 127.1 80 81.2
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 6.3e-28 127.1 80 81.2
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 6.3e-28 127.1 81 81.5
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 8.2e-28 126.7 81 81.5
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.2e-26 122.9 79 78.5
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 1.2e-26 122.9 79 75.9
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 1.6e-26 122.5 75 82.7
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 2.6e-26 121.7 79 77.2
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 4.5e-26 120.9 81 75.3
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.7e-25 119.0 75 78.7
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 2.2e-25 118.6 125 56.0
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 6.5e-25 117.1 78 73.1
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 1.9e-24 115.5 103 63.1
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 3.2e-24 114.8 79 70.9
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.2e-23 112.8 79 69.6
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.2e-23 112.8 78 70.5
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 2.1e-23 112.1 79 70.9
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 3.3e-21 104.8 79 64.6
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.4e-21 104.4 63 82.5
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 1.3e-17 92.8 56 82.1
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 6.8e-14 80.5 48 83.3
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 5.4e-11 70.9 44 79.5
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 5.9e-10 67.4 42 81.0
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.0e-09 66.6 69 55.1
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 4.2e-08 61.2 30 93.3


User provided reference genes

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