Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 3.9e-140 501.5 261 100.0
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 3.9e-100 368.6 250 75.2
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 9.0e-97 357.5 251 73.7
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 1.7e-79 300.1 252 58.3
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.3e-76 289.7 254 59.8
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.3e-76 289.7 254 59.8
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 2.3e-76 289.7 252 59.1
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 2.3e-76 289.7 252 58.7
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 3.9e-76 288.9 251 59.0
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 2.5e-75 286.2 246 58.9
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 2.8e-74 282.7 246 58.5
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 3.7e-74 282.3 249 57.4
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 4.8e-74 282.0 248 56.0
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 1.8e-73 280.0 256 57.0
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 5.3e-73 278.5 252 56.3
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 3.4e-72 275.8 244 57.0
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 5.9e-72 275.0 244 57.4
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 1.0e-71 274.2 252 55.6
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 1.3e-71 273.9 256 57.0
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 1.7e-71 273.5 252 56.7
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 2.2e-71 273.1 252 56.0
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 3.8e-71 272.3 252 55.2
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 5.0e-71 271.9 216 60.6
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 6.5e-71 271.6 240 57.5
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 3.2e-70 269.2 255 54.5
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 7.2e-70 268.1 255 56.5
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 1.2e-69 267.3 246 55.3
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.6e-69 266.9 256 52.7
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 2.7e-69 266.2 254 55.1
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 2.7e-69 266.2 246 53.3
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 2.7e-69 266.2 246 53.3
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 3.6e-69 265.8 247 55.5
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 6.1e-69 265.0 252 53.2
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 3.9e-68 262.3 246 52.4
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 6.7e-68 261.5 255 53.3
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.1e-67 260.8 254 50.8
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.1e-67 260.8 254 50.8
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 1.5e-67 260.4 253 52.2
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.5e-67 260.4 256 53.1
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 1.5e-67 260.4 258 51.9
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.5e-67 260.4 324 45.1
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 2.0e-67 260.0 240 52.1
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 2.0e-67 260.0 247 55.1
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 2.0e-67 260.0 265 50.6
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 2.6e-67 259.6 252 53.6
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 2.6e-67 259.6 252 53.2
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 9.7e-67 257.7 207 64.7
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 9.7e-67 257.7 245 55.1
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 1.3e-66 257.3 250 52.0
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 2.8e-66 256.1 245 51.8
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 2.8e-66 256.1 253 53.8
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 2.8e-66 256.1 256 53.5
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 3.7e-66 255.8 244 52.5
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 6.3e-66 255.0 251 52.6
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 1.1e-65 254.2 245 53.5
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 1.1e-65 254.2 249 50.6
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 1.1e-65 254.2 245 53.1
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 1.4e-65 253.8 251 51.4
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 3.1e-65 252.7 253 52.6
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 4.1e-65 252.3 251 51.0
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 4.1e-65 252.3 245 53.1
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 1.2e-64 250.8 251 51.0
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 1.2e-64 250.8 251 51.0
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 7.7e-64 248.1 243 51.4
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 1.3e-63 247.3 252 52.0
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 2.2e-63 246.5 258 50.0
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 2.2e-63 246.5 246 52.4
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 2.2e-63 246.5 253 51.8
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 3.8e-63 245.7 237 54.0
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 5.0e-63 245.4 251 52.6
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 1.1e-62 244.2 249 51.0
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 2.5e-62 243.0 246 52.4
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 3.2e-62 242.7 206 58.7
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 7.2e-62 241.5 249 50.6
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 9.4e-62 241.1 210 56.2
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.6e-61 240.4 250 50.0
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 1.0e-60 237.7 248 52.4
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 1.0e-60 237.7 251 50.2
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 1.4e-60 237.3 255 48.6
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.3e-60 236.5 253 52.6
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 5.2e-60 235.3 241 52.3
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 4.4e-59 232.3 246 48.0
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 4.4e-59 232.3 243 50.6
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 7.5e-59 231.5 241 50.2
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 2.8e-58 229.6 252 50.8
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 9.1e-57 224.6 251 49.0
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 4.5e-56 222.2 241 47.7
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 6.5e-55 218.4 207 54.1
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.5e-54 217.2 221 52.5
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 1.5e-54 217.2 203 55.2
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 7.2e-54 214.9 299 42.5
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 2.7e-53 213.0 241 46.5
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 4.5e-48 195.7 252 46.8
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 3.8e-47 192.6 252 45.6
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 8.5e-47 191.4 177 53.1
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 4.0e-44 182.6 204 47.5
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 4.5e-40 169.1 182 49.5
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 7.7e-40 168.3 141 61.7
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.0e-39 167.9 155 53.5
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 1.7e-39 167.2 182 51.1
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 4.7e-37 159.1 247 36.4
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.3e-34 151.0 246 33.3
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 1.8e-33 147.1 275 32.4
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 2.7e-32 143.3 123 53.7
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.6e-29 134.0 216 38.0
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 2.1e-29 133.7 147 44.9
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.0e-28 131.3 174 43.1
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 7.5e-27 125.2 135 54.1
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 6.4e-26 122.1 241 28.2
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 6.0e-24 115.5 130 50.8
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 8.1e-21 105.1 131 45.8
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.1e-20 104.8 97 54.6
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 3.1e-20 103.2 146 43.2
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.4e-12 77.8 92 39.1
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 3.4e-11 73.2 120 30.0
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 2.2e-10 70.5 233 27.9
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 6.0e-08 62.4 113 30.1
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 1.3e-07 61.2 81 42.0
Nn2g11894 Nelumbo nucifera HOM05D001060 ORTHO05D008097 1.7e-07 60.8 120 38.3
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 8.6e-07 58.5 74 40.5


User provided reference genes

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