Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 3.2e-104 381.7 185 100.0
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 3.2e-104 381.7 185 100.0
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 3.2e-104 381.7 185 100.0
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 3.2e-104 381.7 185 100.0
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 3.2e-104 381.7 185 100.0
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 3.2e-104 381.7 185 100.0
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 9.8e-98 360.1 185 92.4
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 7.1e-96 354.0 185 90.8
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 1.2e-95 353.2 185 91.4
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 6.6e-94 347.4 185 90.3
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 6.6e-94 347.4 185 89.7
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 6.6e-94 347.4 185 89.7
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 1.5e-93 346.3 185 90.3
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 1.2e-92 343.2 182 90.1
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 1.2e-92 343.2 185 88.6
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 1.1e-91 340.1 185 87.6
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 1.4e-91 339.7 185 87.0
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 2.3e-91 339.0 185 86.5
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 4.0e-91 338.2 185 89.2
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 5.2e-91 337.8 185 87.6
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 6.8e-91 337.4 185 87.6
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 1.5e-90 336.3 185 87.0
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 2.6e-90 335.5 185 87.0
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 3.2e-88 328.6 185 85.9
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 9.2e-88 327.0 185 85.4
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 2.7e-87 325.5 171 90.6
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 2.7e-87 325.5 171 90.6
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 6.0e-87 324.3 182 85.7
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 6.0e-87 324.3 185 85.4
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 2.3e-86 322.4 185 84.9
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 2.3e-86 322.4 185 84.9
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 2.3e-86 322.4 185 84.9
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 2.3e-86 322.4 185 84.9
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 2.3e-86 322.4 185 84.9
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 5.1e-86 321.2 185 84.3
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 1.5e-85 319.7 185 84.3
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 1.5e-85 319.7 185 84.3
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 1.5e-85 319.7 185 84.3
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 1.2e-82 310.1 185 83.8
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 3.8e-81 305.1 184 80.4
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 5.4e-80 301.2 185 79.5
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 5.4e-80 301.2 170 85.9
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 2.7e-79 298.9 171 86.0
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.1e-77 293.5 182 79.1
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.3e-76 290.0 182 78.6
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 2.8e-76 288.9 185 81.1
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 8.1e-76 287.3 185 78.4
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.6e-74 282.3 182 76.9
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.6e-74 282.3 182 76.9
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 2.6e-74 282.3 185 73.5
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 2.2e-73 279.3 158 84.8
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 4.2e-72 275.0 182 76.9
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 7.1e-72 274.2 182 75.3
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 4.6e-71 271.6 185 73.0
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.6e-66 255.8 182 72.0
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 1.4e-64 250.0 120 100.0
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 1.4e-64 250.0 120 100.0
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 1.4e-64 250.0 120 100.0
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 9.3e-64 247.3 185 69.2
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 1.0e-62 243.8 141 83.0
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 1.8e-62 243.0 133 85.0
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 3.0e-62 242.3 130 87.7
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 4.3e-61 238.4 182 65.9
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 5.6e-61 238.0 120 96.7
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 1.6e-60 236.5 118 94.1
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 9.0e-59 230.7 122 87.7
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 1.2e-58 230.3 119 89.1
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 7.6e-58 227.6 120 88.3
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 4.9e-57 224.9 120 93.3
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 8.4e-57 224.2 117 88.0
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 8.4e-57 224.2 120 88.3
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.9e-56 223.0 127 84.3
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.5e-56 222.6 117 88.0
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.5e-56 222.6 154 69.5
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 7.1e-56 221.1 186 62.4
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.6e-55 219.9 177 66.1
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 4.6e-55 218.4 120 85.0
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 3.9e-54 215.3 120 85.8
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 3.9e-54 215.3 120 85.8
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 8.7e-54 214.2 140 74.3
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 8.7e-54 214.2 111 92.8
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 2.5e-53 212.6 119 84.9
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 2.1e-52 209.5 124 82.3
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 1.4e-51 206.8 98 100.0
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 4.1e-51 205.3 113 84.1
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 1.2e-50 203.8 192 55.2
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 8.5e-49 197.6 106 89.6
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 1.4e-48 196.8 187 60.4
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 7.2e-48 194.5 178 48.9
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 9.3e-48 194.1 121 80.2
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 2.7e-47 192.6 95 96.8
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 2.7e-47 192.6 95 96.8
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 6.1e-47 191.4 103 89.3
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 1.8e-46 189.9 97 93.8
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 2.3e-46 189.5 96 93.8
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 3.9e-46 188.7 123 78.9
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 6.7e-46 188.0 127 72.4
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.1e-45 187.2 98 88.8
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 1.1e-45 187.2 94 93.6
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.9e-45 186.4 115 75.7
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.9e-45 186.4 119 73.1
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.3e-45 185.7 98 87.8
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 9.7e-45 184.1 120 80.0
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 6.3e-44 181.4 112 79.5
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 6.3e-44 181.4 185 49.7
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 1.1e-43 180.6 171 59.6
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.8e-43 179.9 113 74.3
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 2.4e-43 179.5 97 84.5
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 2.4e-43 179.5 123 74.0
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 4.1e-43 178.7 175 56.0
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 5.3e-43 178.3 120 74.2
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 1.5e-42 176.8 120 74.2
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 2.6e-42 176.0 98 83.7
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 3.4e-42 175.6 95 84.2
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 3.4e-42 175.6 176 56.8
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 4.5e-42 175.3 94 88.3
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 4.5e-42 175.3 120 73.3
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 5.9e-42 174.9 90 91.1
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.3e-41 173.7 94 85.1
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 1.3e-41 173.7 103 79.6
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.9e-41 172.6 186 54.3
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 3.8e-41 172.2 95 83.2
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 6.5e-41 171.4 190 50.5
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 8.5e-41 171.0 189 51.3
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.1e-40 170.6 100 80.0
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 1.9e-40 169.9 120 68.3
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 7.2e-40 167.9 92 83.7
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.6e-39 166.8 117 70.9
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 4.6e-39 165.2 87 88.5
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.3e-38 162.9 94 77.7
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 4.4e-37 158.7 174 48.3
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.2e-36 156.4 86 83.7
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 4.8e-36 155.2 131 60.3
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 9.1e-35 151.0 88 80.7
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.2e-33 146.4 89 76.4
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 4.2e-32 142.1 167 52.1
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 2.3e-30 136.3 81 79.0
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.3e-29 132.5 78 79.5
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.3e-29 132.5 78 79.5
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.3e-29 132.5 78 79.5
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.3e-29 132.5 78 79.5
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 3.3e-29 132.5 78 79.5
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 9.7e-29 131.0 77 79.2
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 9.7e-29 131.0 77 79.2
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 9.7e-29 131.0 77 79.2
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 9.7e-29 131.0 77 79.2
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 9.7e-29 131.0 77 79.2
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.2e-28 129.8 70 82.9
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 2.4e-27 126.3 125 56.8
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 7.7e-26 121.3 96 62.5
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 5.5e-24 115.2 156 47.4
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 2.1e-23 113.2 64 85.9
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.0e-23 111.3 123 49.6
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.3e-22 109.8 70 68.6
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 3.0e-22 109.4 61 85.2
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 4.0e-22 109.0 75 68.0
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 1.2e-21 107.5 62 80.6
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 2.0e-21 106.7 62 79.0
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.0e-21 106.7 82 64.6
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 1.7e-20 103.6 60 81.7
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 2.8e-20 102.8 111 50.5
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 4.8e-20 102.1 62 80.6
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 4.8e-20 102.1 91 57.1
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 6.3e-20 101.7 64 78.1
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 8.2e-20 101.3 78 62.8
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 5.3e-19 98.6 55 85.5
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 5.3e-19 98.6 117 47.9
BolSC29t60589H Brassica oleracea HOM05D000806 ORTHO05D007429 9.1e-19 97.8 60 80.0
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 2.0e-18 96.7 61 78.7
MD15G1388400 Malus domestica HOM05D000806 ORTHO05D007429 2.7e-18 96.3 62 77.4
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 3.5e-18 95.9 93 54.8
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 7.7e-18 94.7 53 83.0
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 7.7e-18 94.7 53 83.0
BolC9t55821H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-17 94.4 60 75.0
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 5.5e-16 88.6 52 76.9
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 1.6e-15 87.0 49 83.7
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 8.0e-15 84.7 57 77.2
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 6.3e-12 75.1 49 73.5
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.1e-11 74.3 49 73.5
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 1.2e-10 70.9 49 73.5
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.6e-10 70.5 33 90.9
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.6e-10 70.5 33 90.9
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 1.0e-09 67.8 36 83.3
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 6.5e-09 65.1 32 87.5
Migut.H00990 Erythranthe guttata HOM05D000806 ORTHO05D007429 2.5e-08 63.2 36 86.1
FAN07G1499 Fragaria x ananassa HOM05D000806 ORTHO05D007429 6.1e-07 58.5 54 55.6


User provided reference genes

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