Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0267561 Helianthus annuus HOM05D003738 ORTHO05D005143 2.6e-58 228.4 106 100.0
HanXRQChr07g0193781 Helianthus annuus HOM05D003738 ORTHO05D005143 4.1e-40 167.9 101 80.2
ECA238G0020 Erigeron canadensis HOM05D003738 ORTHO05D005143 1.0e-38 163.3 101 76.2
Phvul.008G243200 Phaseolus vulgaris HOM05D003738 ORTHO05D005143 1.1e-37 159.8 101 75.2
Glyma.02G238800 Glycine max HOM05D003738 ORTHO05D005143 1.9e-37 159.1 101 74.3
Lsat_1_v5_gn_2_80860 Lactuca sativa HOM05D003738 ORTHO05D005143 1.9e-37 159.1 101 73.3
Glyma.14G207700 Glycine max HOM05D003738 ORTHO05D005143 2.5e-37 158.7 101 74.3
VMungo0647G1516 Vigna mungo HOM05D003738 ORTHO05D005143 2.5e-37 158.7 101 75.2
THA.LOC104820853 Tarenaya hassleriana HOM05D003738 ORTHO05D005143 5.6e-37 157.5 101 72.3
CANSAT78G1141 Cannabis sativa HOM05D003738 ORTHO05D005143 9.5e-37 156.8 101 72.3
Nn4g24034 Nelumbo nucifera HOM05D003738 ORTHO05D005143 2.1e-36 155.6 101 70.3
Rhsim10G0076800 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.1e-36 155.6 101 72.3
Eucgr.F02797 Eucalyptus grandis HOM05D003738 ORTHO05D005143 2.8e-36 155.2 101 71.3
Lj2g0012793 Lotus japonicus HOM05D003738 ORTHO05D005143 2.8e-36 155.2 101 72.3
vmacro05488 Vaccinium macrocarpon HOM05D003738 ORTHO05D005143 2.8e-36 155.2 101 72.3
Lj2A438T57 Lonicera japonica HOM05D003738 ORTHO05D005143 3.6e-36 154.8 101 72.3
Medtr6g004200 Medicago truncatula HOM05D003738 ORTHO05D005143 3.6e-36 154.8 101 71.3
Aqoxy3G00165 Aquilegia oxysepala HOM05D003738 ORTHO05D005143 4.7e-36 154.5 101 72.3
Prupe.3G150000 Prunus persica HOM05D003738 ORTHO05D005143 4.7e-36 154.5 101 73.3
Hund13699 Selenicereus undatus HOM05D003738 ORTHO05D005143 4.7e-36 154.5 101 71.3
Potri.004G094600 Populus trichocarpa HOM05D003738 ORTHO05D005143 6.1e-36 154.1 101 71.3
CARHR195830 Cardamine hirsuta HOM05D003738 ORTHO05D005143 8.0e-36 153.7 101 71.3
Ca_04135_v3 Cicer arietinum L. HOM05D003738 ORTHO05D005143 8.0e-36 153.7 101 69.3
TWI77G0590 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 8.0e-36 153.7 101 70.3
BcaC04g18797 Brassica carinata HOM05D003738 ORTHO05D005143 1.0e-35 153.3 101 70.3
BolC9t58818H Brassica oleracea HOM05D003738 ORTHO05D005143 1.0e-35 153.3 101 70.3
MELO3C010381.2 Cucumis melo HOM05D003738 ORTHO05D005143 1.0e-35 153.3 101 71.3
Thhalv10013104m.g Eutrema salsugineum HOM05D003738 ORTHO05D005143 1.0e-35 153.3 101 70.3
Sc10g0001020 Simmondsia chinensis HOM05D003738 ORTHO05D005143 1.0e-35 153.3 101 71.3
Carub.0006s1559 Capsella rubella HOM05D003738 ORTHO05D005143 1.4e-35 152.9 101 70.3
Cpa.g.sc170.16 Carica papaya HOM05D003738 ORTHO05D005143 1.8e-35 152.5 101 70.3
RcHm_v2.0_Chr3g0494041 Rosa chinensis HOM05D003738 ORTHO05D005143 1.8e-35 152.5 101 71.3
Solyc02g091100.3 Solanum lycopersicum HOM05D003738 ORTHO05D005143 1.8e-35 152.5 101 70.3
Sopen02g035750 Solanum pennellii HOM05D003738 ORTHO05D005143 1.8e-35 152.5 101 70.3
Atru.chr1.1579 Acer truncatum HOM05D003738 ORTHO05D005143 2.3e-35 152.1 101 68.3
CAN.G625.63 Capsicum annuum HOM05D003738 ORTHO05D005143 2.3e-35 152.1 100 71.0
Nitab4.5_0007290g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 2.3e-35 152.1 101 72.3
TWI74G0253 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 2.3e-35 152.1 101 71.3
BcaB08g36776 Brassica carinata HOM05D003738 ORTHO05D005143 3.0e-35 151.8 101 70.3
A10p22030 Brassica napus HOM05D003738 ORTHO05D005143 3.0e-35 151.8 101 70.3
C09p59780 Brassica napus HOM05D003738 ORTHO05D005143 3.0e-35 151.8 101 70.3
BraA10t44260Z Brassica rapa HOM05D003738 ORTHO05D005143 3.0e-35 151.8 101 70.3
Migut.L00189 Erythranthe guttata HOM05D003738 ORTHO05D005143 3.0e-35 151.8 101 70.3
Manes.01G113700 Manihot esculenta HOM05D003738 ORTHO05D005143 3.0e-35 151.8 101 71.3
Sabra04G0063900 Salix brachista HOM05D003738 ORTHO05D005143 3.0e-35 151.8 101 69.3
CsaV3_4G010390 Cucumis sativus L. HOM05D003738 ORTHO05D005143 4.0e-35 151.4 101 70.3
DCAR_025892 Daucus carota HOM05D003738 ORTHO05D005143 5.2e-35 151.0 101 70.3
SGA_v2.0_scaffold329G48870 Striga asiatica HOM05D003738 ORTHO05D005143 5.2e-35 151.0 101 68.3
arahy.Tifrunner.gnm1.ann1.KYQ4XK Arachis hypogaea HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 69.3
arahy.Tifrunner.gnm1.ann1.UI9B1P Arachis hypogaea HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 69.3
FvH4_1g28990 Fragaria vesca HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 70.3
FAN19G0768 Fragaria x ananassa HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 70.3
FAN26G1505 Fragaria x ananassa HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 70.3
Peaxi162Scf00129g00317 Petunia axillaris HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 70.3
Peaxi162Scf00458g00011 Petunia axillaris HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 70.3
Sp6g26840 Schrenkiella parvula HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 69.3
TAR374G1203 Trochodendron aralioides HOM05D003738 ORTHO05D005143 6.8e-35 150.6 101 69.3
AL6G28450 Arabidopsis lyrata HOM05D003738 ORTHO05D005143 8.9e-35 150.2 101 70.3
ClCG07G016430 Citrullus lanatus HOM05D003738 ORTHO05D005143 8.9e-35 150.2 101 69.3
SalBow4G0814 Salvia bowleyana HOM05D003738 ORTHO05D005143 8.9e-35 150.2 101 70.3
PGSC0003DMG400030633 Solanum tuberosum HOM05D003738 ORTHO05D005143 8.9e-35 150.2 101 69.3
Actinidia36345 Actinidia chinensis HOM05D003738 ORTHO05D005143 1.2e-34 149.8 101 69.3
Aa31LG11G12270 Aethionema arabicum HOM05D003738 ORTHO05D005143 1.2e-34 149.8 101 69.3
MD00G1054500 Malus domestica HOM05D003738 ORTHO05D005143 1.2e-34 149.8 101 71.3
Nitab4.5_0011323g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 1.2e-34 149.8 101 71.3
Sed0022193 Sechium edule HOM05D003738 ORTHO05D005143 1.2e-34 149.8 101 70.3
CSS0050020 Camellia sinensis var. sinensis HOM05D003738 ORTHO05D005143 1.5e-34 149.4 90 76.7
Lalb_Chr02g0160571 Lupinus albus HOM05D003738 ORTHO05D005143 1.5e-34 149.4 101 68.3
AT5G17380 Arabidopsis thaliana HOM05D003738 ORTHO05D005143 2.0e-34 149.1 101 69.3
FAN23G1334 Fragaria x ananassa HOM05D003738 ORTHO05D005143 2.0e-34 149.1 101 69.3
Oeu061823.1 Olea europaea HOM05D003738 ORTHO05D005143 2.0e-34 149.1 101 71.3
EL10Ac2g04518 Beta vulgaris HOM05D003738 ORTHO05D005143 2.6e-34 148.7 101 67.3
Cfa007882 Carpinus fangiana HOM05D003738 ORTHO05D005143 2.6e-34 148.7 101 69.3
Ciclev10011371m.g Citrus clementina HOM05D003738 ORTHO05D005143 2.6e-34 148.7 101 68.3
CDE07G0683 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 3.4e-34 148.3 101 66.3
Psat1g052800 Pisum sativum HOM05D003738 ORTHO05D005143 3.4e-34 148.3 101 67.3
MSTRG.15310 Avicennia marina HOM05D003738 ORTHO05D005143 4.4e-34 147.9 101 68.3
Gohir.A11G166650 Gossypium hirsutum HOM05D003738 ORTHO05D005143 4.4e-34 147.9 101 68.3
Gohir.D11G173000 Gossypium hirsutum HOM05D003738 ORTHO05D005143 4.4e-34 147.9 101 68.3
Gorai.007G185300 Gossypium raimondii HOM05D003738 ORTHO05D005143 4.4e-34 147.9 101 68.3
Nitab4.5_0002456g0020 Nicotiana tabacum HOM05D003738 ORTHO05D005143 4.4e-34 147.9 101 70.3
Rhsim10G0074200 Rhododendron simsii HOM05D003738 ORTHO05D005143 4.4e-34 147.9 101 68.3
Rhsim10G0074800 Rhododendron simsii HOM05D003738 ORTHO05D005143 4.4e-34 147.9 101 68.3
COL.COLO4_12270 Corchorus olitorius HOM05D003738 ORTHO05D005143 5.7e-34 147.5 101 68.3
COL.COLO4_27155 Corchorus olitorius HOM05D003738 ORTHO05D005143 7.5e-34 147.1 100 69.0
AUR62023263 Chenopodium quinoa HOM05D003738 ORTHO05D005143 9.8e-34 146.7 101 68.3
MD09G1258100 Malus domestica HOM05D003738 ORTHO05D005143 9.8e-34 146.7 101 70.3
PSO170G1643 Papaver somniferum HOM05D003738 ORTHO05D005143 9.8e-34 146.7 101 70.3
Thecc.04G126300 Theobroma cacao HOM05D003738 ORTHO05D005143 9.8e-34 146.7 101 68.3
Haze_14195 Corylus avellana HOM05D003738 ORTHO05D005143 1.3e-33 146.4 101 68.3
PSO017G1959 Papaver somniferum HOM05D003738 ORTHO05D005143 1.3e-33 146.4 101 69.3
PSO455G0115 Papaver somniferum HOM05D003738 ORTHO05D005143 1.3e-33 146.4 101 69.3
TPR.G25203 Trifolium pratense HOM05D003738 ORTHO05D005143 1.3e-33 146.4 108 65.7
Ciclev10011616m.g Citrus clementina HOM05D003738 ORTHO05D005143 1.7e-33 146.0 101 67.3
Ah.16g101450 Amaranthus hybridus HOM05D003738 ORTHO05D005143 2.2e-33 145.6 101 67.3
AUR62023216 Chenopodium quinoa HOM05D003738 ORTHO05D005143 2.2e-33 145.6 101 67.3
Cc07_g08440 Coffea canephora HOM05D003738 ORTHO05D005143 2.2e-33 145.6 101 68.3
HPP92_003826 Vanilla planifolia HOM05D003738 ORTHO05D005143 2.9e-33 145.2 101 66.3
Lalb_Chr06g0176761 Lupinus albus HOM05D003738 ORTHO05D005143 3.7e-33 144.8 101 67.3
CDE06G1483 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 4.9e-33 144.4 101 65.3
Duzib133G1513 Durio zibethinus HOM05D003738 ORTHO05D005143 4.9e-33 144.4 101 68.3
Duzib138G1092 Durio zibethinus HOM05D003738 ORTHO05D005143 6.4e-33 144.1 101 67.3
CiPaw.03G065800 Carya illinoinensis HOM05D003738 ORTHO05D005143 1.1e-32 143.3 101 64.4
MBI16_g21165_MAGBIO Magnolia biondii HOM05D003738 ORTHO05D005143 2.4e-32 142.1 101 64.4
Os01g0505400 Oryza sativa ssp. japonica HOM05D003738 ORTHO05D005143 2.4e-32 142.1 101 64.4
SHI25638 Sapria himalayana HOM05D003738 ORTHO05D005143 2.4e-32 142.1 101 65.3
Zm00001eb336870 Zea mays HOM05D003738 ORTHO05D005143 3.2e-32 141.7 101 62.4
TAR629G2166 Trochodendron aralioides HOM05D003738 ORTHO05D005143 5.4e-32 141.0 101 66.3
SEGI_09825 Sequoiadendron giganteum HOM05D003738 ORTHO05D005143 3.5e-31 138.3 101 64.4
QL02p049823 Quercus lobata HOM05D003738 ORTHO05D005143 1.0e-30 136.7 105 61.9
ATR0057G018 Amborella trichopoda HOM05D003738 ORTHO05D005143 5.0e-30 134.4 101 63.4
AagrBONN_evm.TU.Sc2ySwM_369.580 Anthoceros agrestis HOM05D003738 ORTHO05D005143 1.5e-29 132.9 101 60.4
Pp3c3_25360 Physcomitrium patens HOM05D003738 ORTHO05D005143 8.0e-28 127.1 101 60.4
Zm00001eb155100 Zea mays HOM05D003738 ORTHO05D005143 4.4e-26 121.3 89 60.7
Mapoly0099s0049 Marchantia polymorpha HOM05D003738 ORTHO05D005143 7.5e-26 120.6 101 55.4
MD16G1277100 Malus domestica HOM05D003738 ORTHO05D005234 6.4e-25 117.5 90 66.7
HanXRQChr02g0040721 Helianthus annuus HOM05D003738 ORTHO05D005143 1.4e-24 116.3 80 72.5
SMO196G0015 Selaginella moellendorffii HOM05D003738 ORTHO05D005143 1.6e-23 112.8 101 51.5
CBR_g39223 Chara braunii HOM05D003738 ORTHO05D005143 1.2e-18 96.7 102 44.1
Rhsim10G0076600 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.0e-18 95.9 101 50.5
Rhsim10G0075800 Rhododendron simsii HOM05D003738 ORTHO05D005143 1.7e-17 92.8 65 64.6
Rhsim05G0052500 Rhododendron simsii HOM05D003738 ORTHO05D005143 2.2e-17 92.4 90 53.3
PRCOL_00004783 Prasinoderma coloniale HOM05D003738 ORTHO05D005143 4.0e-11 71.6 59 52.5
CAN.G1019.3 Capsicum annuum HOM05D003738 ORTHO05D005143 6.0e-07 57.8 36 72.2


User provided reference genes

Program Settings