Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 1.1e-143 513.8 369 100.0
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 2.0e-102 376.7 215 83.3
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 2.6e-102 376.3 228 80.3
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 1.1e-87 327.8 224 67.4
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 1.2e-86 324.3 214 71.0
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 5.9e-86 322.0 211 71.1
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 7.7e-86 321.6 216 70.4
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 5.0e-85 318.9 212 68.9
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 1.5e-84 317.4 221 67.0
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 1.9e-84 317.0 217 69.1
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 2.5e-84 316.6 211 69.2
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 9.5e-84 314.7 211 69.2
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 9.5e-84 314.7 216 67.6
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 9.5e-84 314.7 212 68.9
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 1.6e-83 313.9 225 68.9
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 1.6e-83 313.9 213 67.6
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 3.6e-83 312.8 225 68.9
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 3.6e-83 312.8 230 65.2
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 4.7e-83 312.4 215 66.5
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 8.0e-83 311.6 221 65.6
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.0e-82 311.2 230 63.5
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 1.0e-82 311.2 225 65.3
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 1.0e-82 311.2 212 67.9
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 1.4e-82 310.8 216 66.7
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 1.8e-82 310.5 214 66.8
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 1.8e-82 310.5 211 67.3
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 2.3e-82 310.1 220 65.9
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 2.3e-82 310.1 212 67.9
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 3.0e-82 309.7 228 63.6
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 3.0e-82 309.7 231 63.2
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 3.0e-82 309.7 231 63.2
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 5.2e-82 308.9 217 66.4
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 5.2e-82 308.9 217 66.4
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 5.2e-82 308.9 217 66.4
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 5.2e-82 308.9 217 66.4
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 5.2e-82 308.9 208 68.8
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 6.8e-82 308.5 215 67.9
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 6.8e-82 308.5 228 62.3
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 8.9e-82 308.1 221 63.8
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 1.5e-81 307.4 216 66.2
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 2.0e-81 307.0 214 68.7
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 2.0e-81 307.0 233 63.5
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 2.6e-81 306.6 217 64.5
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 3.4e-81 306.2 215 65.1
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 5.7e-81 305.4 222 64.0
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 9.8e-81 304.7 221 64.3
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 1.3e-80 304.3 233 60.5
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 2.2e-80 303.5 217 65.4
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 2.2e-80 303.5 214 66.8
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 2.2e-80 303.5 238 59.7
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 6.3e-80 302.0 231 62.8
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 1.4e-79 300.8 222 64.4
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 1.8e-79 300.4 226 65.0
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 5.4e-79 298.9 214 63.6
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 7.0e-79 298.5 222 64.0
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 7.0e-79 298.5 215 64.2
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 9.2e-79 298.1 212 63.7
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 9.2e-79 298.1 205 65.9
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 5.9e-78 295.4 215 62.3
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 7.8e-78 295.0 215 61.9
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 7.8e-78 295.0 215 64.2
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.0e-77 294.7 213 64.8
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 1.7e-77 293.9 220 63.2
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 5.0e-77 292.4 206 66.0
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 6.6e-77 292.0 219 61.6
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 6.6e-77 292.0 203 68.5
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 1.9e-76 290.4 216 64.4
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 2.5e-76 290.0 221 62.0
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 5.6e-76 288.9 222 60.8
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 9.5e-76 288.1 209 62.2
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 2.8e-75 286.6 202 65.3
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 2.8e-75 286.6 214 64.0
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 2.8e-75 286.6 216 61.1
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 3.6e-75 286.2 202 63.9
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 6.1e-75 285.4 238 58.4
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 1.4e-74 284.3 229 59.4
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 8.9e-74 281.6 225 62.7
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 3.4e-73 279.6 213 60.1
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 4.4e-73 279.3 205 63.4
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 7.5e-73 278.5 213 59.2
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 4.9e-72 275.8 213 59.2
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 2.4e-71 273.5 213 58.7
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 4.1e-71 272.7 213 57.7
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 1.6e-67 260.8 181 66.3
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 1.2e-65 254.6 188 62.8
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 5.4e-63 245.7 166 69.3
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 4.6e-62 242.7 158 66.5
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 5.1e-61 239.2 144 70.1
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 5.1e-61 239.2 143 72.7
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 6.6e-61 238.8 144 72.2
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 8.6e-61 238.4 168 66.1
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 8.6e-61 238.4 170 67.1
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 9.9e-57 224.9 160 67.5
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 4.9e-56 222.6 156 64.1
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 1.1e-55 221.5 212 55.2
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 5.4e-55 219.2 143 62.9
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.0e-53 214.9 169 59.8
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.7e-53 214.2 300 37.3
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.0e-45 188.3 245 38.4
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 1.3e-43 181.4 164 56.7
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 4.4e-41 172.9 226 41.2
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 4.5e-33 146.4 114 64.9
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 2.2e-32 144.1 152 42.1
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 1.1e-31 141.7 85 69.4
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 2.5e-28 130.6 106 53.8
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 1.1e-26 125.2 106 59.4
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 4.9e-24 116.3 183 35.0
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 2.0e-17 94.4 169 33.7
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 2.2e-16 90.9 60 71.7
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 8.4e-16 89.0 115 40.9
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 4.2e-15 86.7 59 74.6
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 2.7e-14 84.0 59 71.2
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 6.7e-13 79.3 162 35.2
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 1.3e-11 75.1 61 59.0
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 1.1e-10 72.0 47 59.6
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 6.9e-10 69.3 49 63.3
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 2.2e-08 64.3 38 60.5
PRCOL_00002998 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 3.2e-07 60.5 150 28.0
Cfa024972 Carpinus fangiana HOM05D006551 ORTHO05D043702 6.1e-06 56.2 124 30.6


User provided reference genes

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